Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF132 and GFF133 are separated by 35 nucleotides GFF133 and GFF134 overlap by 4 nucleotides
GFF132 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 160,488 to 161,459
GFF132
GFF133 - Ferredoxin, at 161,495 to 161,824
GFF133
GFF134 - putative oxidoreductase (AsfA-like), putative L-aspartate oxidase( EC:1.4.3.16 ), at 161,821 to 163,443
GFF134
Position (kb) 161
162 Strain fitness (log2 ratio) -1
0
1 at 160.681 kb on + strand, within GFF132 at 160.682 kb on - strand, within GFF132 at 160.684 kb on + strand, within GFF132 at 160.684 kb on + strand, within GFF132 at 160.996 kb on + strand, within GFF132 at 160.996 kb on + strand, within GFF132 at 160.997 kb on - strand, within GFF132 at 161.008 kb on + strand, within GFF132 at 161.008 kb on + strand, within GFF132 at 161.008 kb on + strand, within GFF132 at 161.009 kb on - strand, within GFF132 at 161.009 kb on - strand, within GFF132 at 161.170 kb on + strand, within GFF132 at 161.170 kb on + strand, within GFF132 at 161.580 kb on + strand, within GFF133 at 161.581 kb on - strand, within GFF133 at 161.655 kb on + strand, within GFF133 at 161.676 kb on + strand, within GFF133 at 161.676 kb on + strand, within GFF133 at 161.972 kb on + strand at 161.973 kb on - strand at 162.389 kb on + strand, within GFF134 at 162.680 kb on + strand, within GFF134 at 162.681 kb on - strand, within GFF134
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 160,681 + GFF132 0.20 -0.8 160,682 - GFF132 0.20 -0.4 160,684 + GFF132 0.20 -0.3 160,684 + GFF132 0.20 -0.8 160,996 + GFF132 0.52 -0.3 160,996 + GFF132 0.52 +1.3 160,997 - GFF132 0.52 -0.7 161,008 + GFF132 0.53 +1.2 161,008 + GFF132 0.53 +0.5 161,008 + GFF132 0.53 -0.1 161,009 - GFF132 0.54 +0.3 161,009 - GFF132 0.54 +0.1 161,170 + GFF132 0.70 +0.3 161,170 + GFF132 0.70 -0.7 161,580 + GFF133 0.26 -0.1 161,581 - GFF133 0.26 +1.2 161,655 + GFF133 0.48 +0.9 161,676 + GFF133 0.55 -0.9 161,676 + GFF133 0.55 +0.8 161,972 + -0.1 161,973 - +0.1 162,389 + GFF134 0.35 -0.3 162,680 + GFF134 0.53 +0.4 162,681 - GFF134 0.53 -0.5
Or see this region's nucleotide sequence