Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7064 and GFF7065 are separated by 68 nucleotides GFF7065 and GFF7066 overlap by 4 nucleotides GFF7066 and GFF7067 are separated by 132 nucleotides
GFF7064 - Glutamate--cysteine ligase (EC 6.3.2.2), at 22,571 to 24,076
GFF7064
GFF7065 - no description, at 24,145 to 24,279
GFF7065
GFF7066 - Two-component transcriptional response regulator receiver domain, at 24,276 to 24,656
GFF7066
GFF7067 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 24,789 to 25,718
GFF7067
Position (kb) 24
25 Strain fitness (log2 ratio) -2
-1
0
1 at 23.279 kb on + strand, within GFF7064 at 23.279 kb on + strand, within GFF7064 at 23.280 kb on - strand, within GFF7064 at 23.315 kb on + strand, within GFF7064 at 23.316 kb on - strand, within GFF7064 at 23.316 kb on - strand, within GFF7064 at 23.316 kb on - strand, within GFF7064 at 23.360 kb on + strand, within GFF7064 at 23.360 kb on + strand, within GFF7064 at 23.360 kb on + strand, within GFF7064 at 23.360 kb on + strand, within GFF7064 at 23.360 kb on + strand, within GFF7064 at 23.360 kb on + strand, within GFF7064 at 23.361 kb on - strand, within GFF7064 at 23.361 kb on - strand, within GFF7064 at 23.438 kb on + strand, within GFF7064 at 23.439 kb on - strand, within GFF7064 at 23.439 kb on - strand, within GFF7064 at 23.843 kb on + strand, within GFF7064 at 24.005 kb on + strand at 24.005 kb on + strand at 24.005 kb on + strand at 24.005 kb on + strand at 24.006 kb on - strand at 24.006 kb on - strand at 24.017 kb on + strand at 24.017 kb on + strand at 24.017 kb on + strand at 24.017 kb on + strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.018 kb on - strand at 24.074 kb on + strand at 24.075 kb on - strand at 24.151 kb on + strand at 24.151 kb on + strand at 24.152 kb on - strand at 24.152 kb on - strand at 24.241 kb on - strand, within GFF7065 at 24.291 kb on + strand at 24.291 kb on + strand at 24.292 kb on - strand at 24.292 kb on - strand at 24.534 kb on + strand, within GFF7066 at 24.534 kb on + strand, within GFF7066 at 24.534 kb on + strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.535 kb on - strand, within GFF7066 at 24.624 kb on + strand at 24.624 kb on + strand at 24.625 kb on - strand at 24.770 kb on - strand at 25.233 kb on + strand, within GFF7067 at 25.272 kb on + strand, within GFF7067 at 25.296 kb on + strand, within GFF7067 at 25.296 kb on + strand, within GFF7067 at 25.296 kb on + strand, within GFF7067 at 25.297 kb on - strand, within GFF7067 at 25.297 kb on - strand, within GFF7067 at 25.297 kb on - strand, within GFF7067 at 25.297 kb on - strand, within GFF7067 at 25.428 kb on + strand, within GFF7067
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 23,279 + GFF7064 0.47 -0.8 23,279 + GFF7064 0.47 -0.7 23,280 - GFF7064 0.47 -0.2 23,315 + GFF7064 0.49 -0.7 23,316 - GFF7064 0.49 +0.0 23,316 - GFF7064 0.49 -0.1 23,316 - GFF7064 0.49 -0.1 23,360 + GFF7064 0.52 -1.5 23,360 + GFF7064 0.52 -0.3 23,360 + GFF7064 0.52 +0.3 23,360 + GFF7064 0.52 -1.7 23,360 + GFF7064 0.52 +0.6 23,360 + GFF7064 0.52 +1.5 23,361 - GFF7064 0.52 +0.1 23,361 - GFF7064 0.52 +0.7 23,438 + GFF7064 0.58 +0.4 23,439 - GFF7064 0.58 -0.7 23,439 - GFF7064 0.58 -0.7 23,843 + GFF7064 0.84 +0.5 24,005 + +0.5 24,005 + +0.9 24,005 + -0.4 24,005 + +0.0 24,006 - +0.1 24,006 - +0.9 24,017 + -0.0 24,017 + +0.7 24,017 + -0.3 24,017 + -1.9 24,018 - -0.3 24,018 - -0.2 24,018 - -0.2 24,018 - +0.8 24,018 - -0.9 24,018 - +1.0 24,018 - -0.5 24,018 - +1.7 24,018 - -0.9 24,018 - -2.4 24,018 - -0.2 24,018 - +0.2 24,074 + +0.9 24,075 - -0.2 24,151 + -0.6 24,151 + -0.3 24,152 - -0.7 24,152 - +0.3 24,241 - GFF7065 0.71 +0.3 24,291 + -0.1 24,291 + +0.2 24,292 - -0.6 24,292 - -1.7 24,534 + GFF7066 0.68 -0.5 24,534 + GFF7066 0.68 -0.5 24,534 + GFF7066 0.68 +0.1 24,535 - GFF7066 0.68 -1.7 24,535 - GFF7066 0.68 -0.3 24,535 - GFF7066 0.68 -0.6 24,535 - GFF7066 0.68 -1.3 24,535 - GFF7066 0.68 -1.0 24,535 - GFF7066 0.68 +0.0 24,535 - GFF7066 0.68 +0.2 24,624 + +0.2 24,624 + -2.1 24,625 - -0.1 24,770 - -0.7 25,233 + GFF7067 0.48 -0.2 25,272 + GFF7067 0.52 +0.1 25,296 + GFF7067 0.55 -0.9 25,296 + GFF7067 0.55 +0.2 25,296 + GFF7067 0.55 +0.0 25,297 - GFF7067 0.55 +0.3 25,297 - GFF7067 0.55 -0.1 25,297 - GFF7067 0.55 -0.3 25,297 - GFF7067 0.55 -0.0 25,428 + GFF7067 0.69 +0.8
Or see this region's nucleotide sequence