Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5763 and GFF5764 are separated by 19 nucleotides GFF5764 and GFF5765 are separated by 100 nucleotides GFF5765 and GFF5766 overlap by 4 nucleotides
GFF5763 - Signal transduction histidine kinase CheA, at 134,585 to 136,681
GFF5763
GFF5764 - hypothetical protein, at 136,701 to 138,008
GFF5764
GFF5765 - Chemotaxis protein methyltransferase CheR (EC 2.1.1.80), at 138,109 to 138,942
GFF5765
GFF5766 - Chemotaxis protein CheD, at 138,939 to 139,613
GFF5766
Position (kb) 136
137
138
139 Strain fitness (log2 ratio) -2
-1
0
1
2 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.747 kb on - strand, within GFF5763 at 135.747 kb on - strand, within GFF5763 at 136.250 kb on + strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.268 kb on + strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.520 kb on + strand at 136.520 kb on + strand at 136.520 kb on + strand at 136.806 kb on + strand at 137.231 kb on - strand, within GFF5764 at 137.490 kb on + strand, within GFF5764 at 137.491 kb on - strand, within GFF5764 at 137.505 kb on + strand, within GFF5764 at 137.506 kb on - strand, within GFF5764 at 137.589 kb on + strand, within GFF5764 at 138.070 kb on + strand at 138.070 kb on + strand at 138.070 kb on + strand at 138.070 kb on + strand at 138.070 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.074 kb on + strand at 138.075 kb on - strand at 138.075 kb on - strand at 138.214 kb on + strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.215 kb on - strand, within GFF5765 at 138.268 kb on + strand, within GFF5765 at 138.268 kb on + strand, within GFF5765 at 138.268 kb on + strand, within GFF5765 at 138.269 kb on - strand, within GFF5765 at 138.269 kb on - strand, within GFF5765 at 138.454 kb on + strand, within GFF5765 at 138.766 kb on + strand, within GFF5765 at 138.767 kb on - strand, within GFF5765 at 138.904 kb on + strand at 138.904 kb on + strand at 138.987 kb on + strand at 138.987 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 135,746 + GFF5763 0.55 +2.6 135,746 + GFF5763 0.55 -0.3 135,746 + GFF5763 0.55 -2.2 135,746 + GFF5763 0.55 -0.4 135,746 + GFF5763 0.55 +1.6 135,747 - GFF5763 0.55 -0.4 135,747 - GFF5763 0.55 -1.4 136,250 + GFF5763 0.79 +0.3 136,251 - GFF5763 0.79 -0.9 136,251 - GFF5763 0.79 -0.0 136,251 - GFF5763 0.79 +0.9 136,251 - GFF5763 0.79 +0.7 136,268 + GFF5763 0.80 +0.6 136,269 - GFF5763 0.80 +1.9 136,269 - GFF5763 0.80 -0.2 136,269 - GFF5763 0.80 -0.1 136,269 - GFF5763 0.80 +0.6 136,520 + -0.7 136,520 + +1.1 136,520 + -0.0 136,806 + +2.3 137,231 - GFF5764 0.41 -1.7 137,490 + GFF5764 0.60 -0.6 137,491 - GFF5764 0.60 +0.0 137,505 + GFF5764 0.61 -1.1 137,506 - GFF5764 0.62 +0.0 137,589 + GFF5764 0.68 +1.3 138,070 + +0.3 138,070 + +0.6 138,070 + +0.7 138,070 + -0.7 138,070 + -0.4 138,074 + +0.5 138,074 + -0.0 138,074 + -0.4 138,074 + +0.4 138,074 + -0.1 138,075 - -0.6 138,075 - -0.2 138,214 + GFF5765 0.13 -0.4 138,215 - GFF5765 0.13 +0.9 138,215 - GFF5765 0.13 -0.6 138,215 - GFF5765 0.13 -0.1 138,215 - GFF5765 0.13 +0.0 138,215 - GFF5765 0.13 +0.3 138,215 - GFF5765 0.13 -0.2 138,268 + GFF5765 0.19 -0.8 138,268 + GFF5765 0.19 -0.6 138,268 + GFF5765 0.19 -0.3 138,269 - GFF5765 0.19 -0.2 138,269 - GFF5765 0.19 +0.2 138,454 + GFF5765 0.41 +0.2 138,766 + GFF5765 0.79 -1.2 138,767 - GFF5765 0.79 -1.6 138,904 + -0.6 138,904 + +0.3 138,987 + +1.6 138,987 + -0.4
Or see this region's nucleotide sequence