Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5114 and GFF5115 are separated by 17 nucleotides GFF5115 and GFF5116 overlap by 1 nucleotides
GFF5114 - Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF, at 214,865 to 216,097
GFF5114
GFF5115 - Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE, at 216,115 to 217,233
GFF5115
GFF5116 - Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD, at 217,233 to 218,735
GFF5116
Position (kb) 216
217
218 Strain fitness (log2 ratio) -2
-1
0
1 at 215.298 kb on + strand, within GFF5114 at 215.299 kb on - strand, within GFF5114 at 215.299 kb on - strand, within GFF5114 at 215.299 kb on - strand, within GFF5114 at 215.299 kb on - strand, within GFF5114 at 215.383 kb on - strand, within GFF5114 at 215.397 kb on + strand, within GFF5114 at 215.397 kb on + strand, within GFF5114 at 215.397 kb on + strand, within GFF5114 at 215.398 kb on - strand, within GFF5114 at 215.826 kb on + strand, within GFF5114 at 215.899 kb on + strand, within GFF5114 at 215.900 kb on - strand, within GFF5114 at 215.900 kb on - strand, within GFF5114 at 215.900 kb on - strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.940 kb on + strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.941 kb on - strand, within GFF5114 at 215.985 kb on + strand at 215.985 kb on + strand at 215.985 kb on + strand at 215.985 kb on + strand at 215.986 kb on - strand at 215.986 kb on - strand at 215.986 kb on - strand at 215.986 kb on - strand at 215.986 kb on - strand at 216.116 kb on + strand at 216.117 kb on - strand at 216.117 kb on - strand at 216.332 kb on + strand, within GFF5115 at 216.332 kb on + strand, within GFF5115 at 216.332 kb on + strand, within GFF5115 at 216.332 kb on + strand, within GFF5115 at 216.333 kb on - strand, within GFF5115 at 216.575 kb on + strand, within GFF5115 at 216.576 kb on - strand, within GFF5115 at 216.576 kb on - strand, within GFF5115 at 216.576 kb on - strand, within GFF5115 at 216.576 kb on - strand, within GFF5115 at 216.597 kb on - strand, within GFF5115 at 216.597 kb on - strand, within GFF5115 at 216.597 kb on - strand, within GFF5115 at 216.597 kb on - strand, within GFF5115 at 216.869 kb on + strand, within GFF5115 at 216.869 kb on + strand, within GFF5115 at 216.870 kb on - strand, within GFF5115 at 216.870 kb on - strand, within GFF5115 at 216.870 kb on - strand, within GFF5115 at 217.064 kb on + strand, within GFF5115 at 217.064 kb on + strand, within GFF5115 at 217.065 kb on - strand, within GFF5115 at 217.065 kb on - strand, within GFF5115 at 217.124 kb on + strand at 217.125 kb on - strand at 217.198 kb on + strand at 217.199 kb on - strand at 217.199 kb on - strand at 217.199 kb on - strand at 217.604 kb on - strand, within GFF5116 at 217.681 kb on + strand, within GFF5116 at 217.681 kb on + strand, within GFF5116 at 217.681 kb on + strand, within GFF5116 at 217.681 kb on + strand, within GFF5116 at 217.681 kb on + strand, within GFF5116 at 217.681 kb on + strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.682 kb on - strand, within GFF5116 at 217.885 kb on - strand, within GFF5116 at 217.886 kb on - strand, within GFF5116
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 215,298 + GFF5114 0.35 -0.4 215,299 - GFF5114 0.35 +0.3 215,299 - GFF5114 0.35 +0.1 215,299 - GFF5114 0.35 +0.7 215,299 - GFF5114 0.35 -1.5 215,383 - GFF5114 0.42 +0.4 215,397 + GFF5114 0.43 -0.3 215,397 + GFF5114 0.43 +0.3 215,397 + GFF5114 0.43 -0.5 215,398 - GFF5114 0.43 -0.7 215,826 + GFF5114 0.78 -0.1 215,899 + GFF5114 0.84 -0.3 215,900 - GFF5114 0.84 -0.0 215,900 - GFF5114 0.84 -0.4 215,900 - GFF5114 0.84 +0.4 215,940 + GFF5114 0.87 -0.3 215,940 + GFF5114 0.87 -0.7 215,940 + GFF5114 0.87 +0.3 215,940 + GFF5114 0.87 -0.2 215,940 + GFF5114 0.87 -0.1 215,940 + GFF5114 0.87 -1.4 215,940 + GFF5114 0.87 -1.8 215,941 - GFF5114 0.87 -0.6 215,941 - GFF5114 0.87 -0.4 215,941 - GFF5114 0.87 +1.7 215,941 - GFF5114 0.87 +0.2 215,941 - GFF5114 0.87 -0.4 215,941 - GFF5114 0.87 -0.5 215,941 - GFF5114 0.87 -0.4 215,985 + +0.1 215,985 + -0.7 215,985 + -0.1 215,985 + -0.2 215,986 - +0.4 215,986 - +0.7 215,986 - -0.1 215,986 - -0.2 215,986 - +1.7 216,116 + -0.1 216,117 - -0.3 216,117 - -0.3 216,332 + GFF5115 0.19 -0.1 216,332 + GFF5115 0.19 -0.1 216,332 + GFF5115 0.19 -1.5 216,332 + GFF5115 0.19 +1.7 216,333 - GFF5115 0.19 +0.0 216,575 + GFF5115 0.41 -0.4 216,576 - GFF5115 0.41 +0.5 216,576 - GFF5115 0.41 -0.5 216,576 - GFF5115 0.41 +0.7 216,576 - GFF5115 0.41 -0.3 216,597 - GFF5115 0.43 -0.5 216,597 - GFF5115 0.43 -0.3 216,597 - GFF5115 0.43 -0.3 216,597 - GFF5115 0.43 -0.2 216,869 + GFF5115 0.67 -0.1 216,869 + GFF5115 0.67 -0.9 216,870 - GFF5115 0.67 +1.7 216,870 - GFF5115 0.67 +0.7 216,870 - GFF5115 0.67 +0.3 217,064 + GFF5115 0.85 -0.6 217,064 + GFF5115 0.85 -1.0 217,065 - GFF5115 0.85 -1.3 217,065 - GFF5115 0.85 -0.7 217,124 + +0.9 217,125 - +0.7 217,198 + -0.6 217,199 - -0.9 217,199 - +1.6 217,199 - -0.6 217,604 - GFF5116 0.25 +0.3 217,681 + GFF5116 0.30 +0.2 217,681 + GFF5116 0.30 -0.1 217,681 + GFF5116 0.30 +0.7 217,681 + GFF5116 0.30 -0.3 217,681 + GFF5116 0.30 -0.5 217,681 + GFF5116 0.30 +1.1 217,682 - GFF5116 0.30 -0.4 217,682 - GFF5116 0.30 +0.1 217,682 - GFF5116 0.30 +0.8 217,682 - GFF5116 0.30 -0.2 217,682 - GFF5116 0.30 -0.8 217,682 - GFF5116 0.30 +0.2 217,682 - GFF5116 0.30 -0.8 217,682 - GFF5116 0.30 -0.3 217,682 - GFF5116 0.30 -0.4 217,682 - GFF5116 0.30 -1.0 217,682 - GFF5116 0.30 -0.4 217,682 - GFF5116 0.30 -1.0 217,682 - GFF5116 0.30 -0.3 217,682 - GFF5116 0.30 -0.7 217,682 - GFF5116 0.30 -0.2 217,682 - GFF5116 0.30 -0.5 217,885 - GFF5116 0.43 -0.8 217,886 - GFF5116 0.43 +0.2
Or see this region's nucleotide sequence