Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4092 and GFF4093 are separated by 39 nucleotides GFF4093 and GFF4094 are separated by 109 nucleotides GFF4094 and GFF4095 are separated by 137 nucleotides
GFF4092 - Copper tolerance protein, at 304,104 to 304,604
GFF4092
GFF4093 - no description, at 304,644 to 304,946
GFF4093
GFF4094 - no description, at 305,056 to 306,099
GFF4094
GFF4095 - no description, at 306,237 to 306,881
GFF4095
Position (kb) 305
306
307 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 304.283 kb on + strand, within GFF4092 at 304.284 kb on - strand, within GFF4092 at 304.455 kb on + strand, within GFF4092 at 304.551 kb on + strand, within GFF4092 at 304.646 kb on - strand at 304.655 kb on - strand at 304.814 kb on - strand, within GFF4093 at 304.828 kb on + strand, within GFF4093 at 304.906 kb on + strand, within GFF4093 at 304.907 kb on - strand, within GFF4093 at 304.935 kb on - strand at 305.059 kb on + strand at 305.060 kb on - strand at 305.060 kb on - strand at 305.060 kb on - strand at 305.073 kb on + strand at 305.073 kb on + strand at 305.074 kb on - strand at 305.157 kb on - strand at 305.193 kb on - strand, within GFF4094 at 305.231 kb on + strand, within GFF4094 at 305.231 kb on + strand, within GFF4094 at 305.232 kb on - strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.369 kb on + strand, within GFF4094 at 305.370 kb on - strand, within GFF4094 at 305.394 kb on - strand, within GFF4094 at 305.394 kb on - strand, within GFF4094 at 305.543 kb on + strand, within GFF4094 at 305.849 kb on + strand, within GFF4094 at 305.849 kb on + strand, within GFF4094 at 305.850 kb on - strand, within GFF4094 at 305.864 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.936 kb on + strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 305.937 kb on - strand, within GFF4094 at 306.004 kb on + strand at 306.004 kb on + strand at 306.080 kb on + strand at 306.081 kb on - strand at 306.081 kb on - strand at 306.125 kb on - strand at 306.125 kb on - strand at 306.147 kb on - strand at 306.157 kb on - strand at 306.157 kb on - strand at 306.214 kb on - strand at 306.214 kb on - strand at 306.239 kb on - strand at 306.239 kb on - strand at 306.239 kb on - strand at 306.616 kb on + strand, within GFF4095 at 306.616 kb on + strand, within GFF4095 at 306.661 kb on + strand, within GFF4095 at 306.661 kb on + strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.662 kb on - strand, within GFF4095 at 306.885 kb on - strand at 306.891 kb on + strand at 306.891 kb on + strand at 306.891 kb on + strand at 306.892 kb on - strand at 306.892 kb on - strand at 306.894 kb on - strand at 306.895 kb on + strand at 306.905 kb on - strand at 306.985 kb on + strand at 306.986 kb on - strand at 306.986 kb on - strand at 306.986 kb on - strand at 306.986 kb on - strand at 306.986 kb on - strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.014 kb on + strand at 307.015 kb on - strand at 307.015 kb on - strand at 307.015 kb on - strand at 307.015 kb on - strand at 307.020 kb on + strand at 307.020 kb on + strand at 307.021 kb on - strand at 307.021 kb on - strand at 307.021 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 304,283 + GFF4092 0.36 +0.9 304,284 - GFF4092 0.36 +0.5 304,455 + GFF4092 0.70 +0.2 304,551 + GFF4092 0.89 +0.0 304,646 - -0.6 304,655 - -0.7 304,814 - GFF4093 0.56 -0.2 304,828 + GFF4093 0.61 +0.4 304,906 + GFF4093 0.86 +0.4 304,907 - GFF4093 0.87 -0.1 304,935 - -1.7 305,059 + -1.8 305,060 - -0.5 305,060 - -0.6 305,060 - +0.2 305,073 + -0.1 305,073 + +0.4 305,074 - -1.0 305,157 - +0.4 305,193 - GFF4094 0.13 +0.9 305,231 + GFF4094 0.17 -0.8 305,231 + GFF4094 0.17 -0.5 305,232 - GFF4094 0.17 -0.4 305,369 + GFF4094 0.30 -1.1 305,369 + GFF4094 0.30 +0.9 305,369 + GFF4094 0.30 -0.8 305,370 - GFF4094 0.30 -0.3 305,394 - GFF4094 0.32 +0.2 305,394 - GFF4094 0.32 -0.6 305,543 + GFF4094 0.47 -0.7 305,849 + GFF4094 0.76 -1.0 305,849 + GFF4094 0.76 +0.2 305,850 - GFF4094 0.76 -0.7 305,864 + GFF4094 0.77 -0.2 305,936 + GFF4094 0.84 +0.4 305,936 + GFF4094 0.84 -0.3 305,936 + GFF4094 0.84 -0.6 305,936 + GFF4094 0.84 +2.8 305,937 - GFF4094 0.84 -0.8 305,937 - GFF4094 0.84 -0.3 305,937 - GFF4094 0.84 -0.4 305,937 - GFF4094 0.84 +0.3 306,004 + +0.0 306,004 + +0.2 306,080 + +0.2 306,081 - -0.2 306,081 - +0.2 306,125 - +0.9 306,125 - -0.4 306,147 - +0.2 306,157 - -0.5 306,157 - -0.3 306,214 - +0.1 306,214 - -0.9 306,239 - +0.3 306,239 - +0.2 306,239 - -1.2 306,616 + GFF4095 0.59 +1.5 306,616 + GFF4095 0.59 -0.4 306,661 + GFF4095 0.66 +0.5 306,661 + GFF4095 0.66 -0.3 306,662 - GFF4095 0.66 +0.1 306,662 - GFF4095 0.66 -0.8 306,662 - GFF4095 0.66 -0.5 306,662 - GFF4095 0.66 -0.8 306,885 - -0.4 306,891 + -0.7 306,891 + -0.8 306,891 + +0.1 306,892 - +1.2 306,892 - +0.1 306,894 - +0.1 306,895 + +0.3 306,905 - -1.0 306,985 + -0.6 306,986 - -0.5 306,986 - -0.1 306,986 - -0.2 306,986 - -0.2 306,986 - -0.7 307,014 + +0.0 307,014 + -0.5 307,014 + +1.5 307,014 + -1.0 307,014 + -0.5 307,014 + -0.3 307,015 - +1.2 307,015 - +0.3 307,015 - +0.1 307,015 - +1.5 307,020 + +0.0 307,020 + -1.1 307,021 - +1.3 307,021 - +0.0 307,021 - +0.8
Or see this region's nucleotide sequence