Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3589 and GFF3590 are separated by 28 nucleotides GFF3590 and GFF3591 are separated by 0 nucleotides
GFF3589 - Transcriptional regulator, LysR family, at 100,250 to 101,164
GFF3589
GFF3590 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 101,193 to 102,107
GFF3590
GFF3591 - Glutathione reductase (EC 1.8.1.7), at 102,108 to 103,466
GFF3591
Position (kb) 101
102
103 Strain fitness (log2 ratio) -1
0
1 at 100.454 kb on + strand, within GFF3589 at 100.454 kb on + strand, within GFF3589 at 100.454 kb on + strand, within GFF3589 at 100.455 kb on - strand, within GFF3589 at 100.691 kb on + strand, within GFF3589 at 100.727 kb on + strand, within GFF3589 at 100.727 kb on + strand, within GFF3589 at 100.727 kb on + strand, within GFF3589 at 100.727 kb on + strand, within GFF3589 at 100.728 kb on - strand, within GFF3589 at 100.728 kb on - strand, within GFF3589 at 100.728 kb on - strand, within GFF3589 at 100.922 kb on + strand, within GFF3589 at 100.922 kb on + strand, within GFF3589 at 100.923 kb on - strand, within GFF3589 at 100.923 kb on - strand, within GFF3589 at 101.057 kb on + strand, within GFF3589 at 101.057 kb on + strand, within GFF3589 at 101.057 kb on + strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.058 kb on - strand, within GFF3589 at 101.232 kb on + strand at 101.232 kb on + strand at 101.232 kb on + strand at 101.232 kb on + strand at 101.232 kb on + strand at 101.233 kb on - strand at 101.233 kb on - strand at 101.235 kb on + strand at 101.235 kb on + strand at 101.568 kb on + strand, within GFF3590 at 101.568 kb on + strand, within GFF3590 at 101.568 kb on + strand, within GFF3590 at 101.568 kb on + strand, within GFF3590 at 101.569 kb on - strand, within GFF3590 at 101.569 kb on - strand, within GFF3590 at 101.569 kb on - strand, within GFF3590 at 101.569 kb on - strand, within GFF3590 at 101.751 kb on + strand, within GFF3590 at 101.752 kb on - strand, within GFF3590 at 101.752 kb on - strand, within GFF3590 at 101.752 kb on - strand, within GFF3590 at 101.752 kb on - strand, within GFF3590 at 101.752 kb on - strand, within GFF3590 at 101.752 kb on - strand, within GFF3590 at 101.753 kb on + strand, within GFF3590 at 101.934 kb on + strand, within GFF3590 at 101.934 kb on + strand, within GFF3590 at 101.935 kb on - strand, within GFF3590 at 102.409 kb on + strand, within GFF3591 at 102.409 kb on + strand, within GFF3591 at 102.463 kb on + strand, within GFF3591 at 102.571 kb on + strand, within GFF3591 at 102.571 kb on + strand, within GFF3591 at 102.572 kb on - strand, within GFF3591 at 102.572 kb on - strand, within GFF3591 at 102.935 kb on - strand, within GFF3591
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 100,454 + GFF3589 0.22 -0.1 100,454 + GFF3589 0.22 +0.2 100,454 + GFF3589 0.22 +0.0 100,455 - GFF3589 0.22 +1.4 100,691 + GFF3589 0.48 -0.6 100,727 + GFF3589 0.52 -1.0 100,727 + GFF3589 0.52 +0.7 100,727 + GFF3589 0.52 +0.3 100,727 + GFF3589 0.52 -0.4 100,728 - GFF3589 0.52 -0.2 100,728 - GFF3589 0.52 -0.8 100,728 - GFF3589 0.52 +0.4 100,922 + GFF3589 0.73 +0.4 100,922 + GFF3589 0.73 -0.9 100,923 - GFF3589 0.74 -0.4 100,923 - GFF3589 0.74 -0.2 101,057 + GFF3589 0.88 -0.1 101,057 + GFF3589 0.88 -1.4 101,057 + GFF3589 0.88 +1.1 101,058 - GFF3589 0.88 +0.0 101,058 - GFF3589 0.88 +0.0 101,058 - GFF3589 0.88 -1.0 101,058 - GFF3589 0.88 +0.0 101,058 - GFF3589 0.88 +0.1 101,058 - GFF3589 0.88 -0.5 101,058 - GFF3589 0.88 -0.0 101,058 - GFF3589 0.88 -0.2 101,232 + -0.5 101,232 + -0.1 101,232 + -0.5 101,232 + -0.0 101,232 + +0.5 101,233 - -0.8 101,233 - -0.1 101,235 + +0.7 101,235 + -0.1 101,568 + GFF3590 0.41 +0.6 101,568 + GFF3590 0.41 +0.7 101,568 + GFF3590 0.41 -0.5 101,568 + GFF3590 0.41 -0.3 101,569 - GFF3590 0.41 +1.1 101,569 - GFF3590 0.41 -1.0 101,569 - GFF3590 0.41 +0.2 101,569 - GFF3590 0.41 +1.3 101,751 + GFF3590 0.61 +0.0 101,752 - GFF3590 0.61 -0.8 101,752 - GFF3590 0.61 +0.5 101,752 - GFF3590 0.61 +1.1 101,752 - GFF3590 0.61 +0.7 101,752 - GFF3590 0.61 +0.7 101,752 - GFF3590 0.61 +0.5 101,753 + GFF3590 0.61 -0.3 101,934 + GFF3590 0.81 -0.3 101,934 + GFF3590 0.81 -0.5 101,935 - GFF3590 0.81 -0.7 102,409 + GFF3591 0.22 +0.9 102,409 + GFF3591 0.22 -0.4 102,463 + GFF3591 0.26 +0.4 102,571 + GFF3591 0.34 -0.1 102,571 + GFF3591 0.34 -0.4 102,572 - GFF3591 0.34 -0.4 102,572 - GFF3591 0.34 -0.1 102,935 - GFF3591 0.61 -0.0
Or see this region's nucleotide sequence