Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2462 and GFF2463 are separated by 21 nucleotides GFF2463 and GFF2464 overlap by 4 nucleotides GFF2464 and GFF2465 are separated by 33 nucleotides GFF2465 and GFF2466 overlap by 4 nucleotides
GFF2462 - Mg(2+) transport ATPase, P-type (EC 3.6.3.2), at 520,488 to 523,253
GFF2462
GFF2463 - Response regulator BaeR, at 523,275 to 523,973
GFF2463
GFF2464 - Sensory histidine kinase BaeS, at 523,970 to 525,730
GFF2464
GFF2465 - no description, at 525,764 to 525,925
GFF2465
GFF2466 - no description, at 525,922 to 526,788
GFF2466
Position (kb) 523
524
525
526 Strain fitness (log2 ratio) -1
0
1
2 at 523.162 kb on - strand at 523.195 kb on - strand at 523.227 kb on + strand at 523.681 kb on + strand, within GFF2463 at 523.682 kb on - strand, within GFF2463 at 523.915 kb on + strand at 523.916 kb on - strand at 524.272 kb on - strand, within GFF2464 at 525.072 kb on + strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.073 kb on - strand, within GFF2464 at 525.255 kb on + strand, within GFF2464 at 525.262 kb on - strand, within GFF2464 at 525.393 kb on + strand, within GFF2464 at 525.393 kb on + strand, within GFF2464 at 525.453 kb on + strand, within GFF2464 at 525.453 kb on + strand, within GFF2464 at 526.069 kb on + strand, within GFF2466 at 526.069 kb on + strand, within GFF2466 at 526.069 kb on + strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.217 kb on - strand, within GFF2466 at 526.445 kb on - strand, within GFF2466 at 526.564 kb on + strand, within GFF2466
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 523,162 - +0.3 523,195 - +0.2 523,227 + +1.2 523,681 + GFF2463 0.58 +0.0 523,682 - GFF2463 0.58 -0.7 523,915 + -1.4 523,916 - -0.3 524,272 - GFF2464 0.17 +0.7 525,072 + GFF2464 0.63 +1.1 525,073 - GFF2464 0.63 +0.9 525,073 - GFF2464 0.63 +0.6 525,073 - GFF2464 0.63 +0.7 525,073 - GFF2464 0.63 -0.8 525,255 + GFF2464 0.73 -0.4 525,262 - GFF2464 0.73 +0.8 525,393 + GFF2464 0.81 +0.4 525,393 + GFF2464 0.81 -0.7 525,453 + GFF2464 0.84 +1.9 525,453 + GFF2464 0.84 +1.0 526,069 + GFF2466 0.17 -0.1 526,069 + GFF2466 0.17 -0.4 526,069 + GFF2466 0.17 -0.3 526,070 - GFF2466 0.17 +0.3 526,070 - GFF2466 0.17 +0.6 526,070 - GFF2466 0.17 -0.0 526,217 - GFF2466 0.34 -0.4 526,445 - GFF2466 0.60 +1.6 526,564 + GFF2466 0.74 +1.1
Or see this region's nucleotide sequence