Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2236 and GFF2237 are separated by 70 nucleotides GFF2237 and GFF2238 are separated by 122 nucleotides GFF2238 and GFF2239 are separated by 274 nucleotides GFF2239 and GFF2240 are separated by 23 nucleotides
GFF2236 - hypothetical protein, at 296,831 to 297,247
GFF2236
GFF2237 - Intracellular protease, at 297,318 to 297,896
GFF2237
GFF2238 - hypothetical protein, at 298,019 to 298,480
GFF2238
GFF2239 - no description, at 298,755 to 299,171
GFF2239
GFF2240 - hypothetical protein, at 299,195 to 299,704
GFF2240
Position (kb) 298
299 Strain fitness (log2 ratio) -1
0
1
2 at 297.075 kb on + strand, within GFF2236 at 297.210 kb on + strand at 297.210 kb on + strand at 297.295 kb on - strand at 297.442 kb on + strand, within GFF2237 at 297.442 kb on + strand, within GFF2237 at 297.442 kb on + strand, within GFF2237 at 297.443 kb on - strand, within GFF2237 at 297.443 kb on - strand, within GFF2237 at 297.620 kb on - strand, within GFF2237 at 297.659 kb on - strand, within GFF2237 at 297.863 kb on - strand at 297.955 kb on + strand at 297.956 kb on - strand at 298.072 kb on - strand, within GFF2238 at 298.204 kb on - strand, within GFF2238 at 298.243 kb on - strand, within GFF2238 at 298.243 kb on - strand, within GFF2238 at 298.580 kb on - strand at 298.580 kb on - strand at 298.580 kb on - strand at 298.633 kb on + strand at 298.633 kb on + strand at 298.634 kb on - strand at 298.634 kb on - strand at 298.679 kb on - strand at 298.679 kb on - strand at 298.679 kb on - strand at 298.739 kb on + strand at 298.739 kb on + strand at 298.739 kb on + strand at 298.739 kb on + strand at 299.049 kb on + strand, within GFF2239 at 299.169 kb on + strand at 299.169 kb on + strand at 299.169 kb on + strand at 299.169 kb on + strand at 299.169 kb on + strand at 299.170 kb on - strand at 299.170 kb on - strand at 299.170 kb on - strand at 299.437 kb on - strand, within GFF2240
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 297,075 + GFF2236 0.59 +0.0 297,210 + -0.5 297,210 + +1.0 297,295 - -0.2 297,442 + GFF2237 0.21 -0.3 297,442 + GFF2237 0.21 -0.0 297,442 + GFF2237 0.21 -0.3 297,443 - GFF2237 0.22 +0.4 297,443 - GFF2237 0.22 -0.3 297,620 - GFF2237 0.52 -0.2 297,659 - GFF2237 0.59 -0.9 297,863 - +2.3 297,955 + +1.0 297,956 - +1.6 298,072 - GFF2238 0.11 -0.7 298,204 - GFF2238 0.40 -0.7 298,243 - GFF2238 0.48 -0.9 298,243 - GFF2238 0.48 +0.1 298,580 - -1.3 298,580 - +0.4 298,580 - +0.0 298,633 + +0.9 298,633 + +0.3 298,634 - -0.6 298,634 - +1.4 298,679 - +0.3 298,679 - +0.8 298,679 - -0.6 298,739 + +1.0 298,739 + +0.2 298,739 + -0.7 298,739 + +0.2 299,049 + GFF2239 0.71 +0.3 299,169 + +0.0 299,169 + +0.0 299,169 + +0.2 299,169 + -0.3 299,169 + -1.7 299,170 - +0.4 299,170 - +0.8 299,170 - +0.2 299,437 - GFF2240 0.47 -0.6
Or see this region's nucleotide sequence