Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1530 and GFF1531 are separated by 29 nucleotides GFF1531 and GFF1532 are separated by 73 nucleotides
GFF1530 - Nucleoside-diphosphate-sugar epimerases, at 127,499 to 128,392
GFF1530
GFF1531 - hypothetical protein, at 128,422 to 129,876
GFF1531
GFF1532 - hypothetical protein, at 129,950 to 130,957
GFF1532
Position (kb) 128
129
130 Strain fitness (log2 ratio) -1
0
1 at 127.456 kb on + strand at 127.457 kb on - strand at 127.463 kb on - strand at 127.463 kb on - strand at 127.578 kb on + strand at 127.579 kb on - strand at 128.048 kb on + strand, within GFF1530 at 128.049 kb on - strand, within GFF1530 at 128.423 kb on + strand at 128.423 kb on + strand at 128.423 kb on + strand at 128.423 kb on + strand at 128.424 kb on - strand at 128.424 kb on - strand at 128.424 kb on - strand at 128.424 kb on - strand at 128.694 kb on - strand, within GFF1531 at 128.888 kb on + strand, within GFF1531 at 128.888 kb on + strand, within GFF1531 at 129.074 kb on + strand, within GFF1531 at 129.074 kb on + strand, within GFF1531 at 129.161 kb on - strand, within GFF1531 at 129.209 kb on + strand, within GFF1531 at 129.209 kb on + strand, within GFF1531 at 129.377 kb on + strand, within GFF1531 at 129.377 kb on + strand, within GFF1531 at 129.377 kb on + strand, within GFF1531 at 129.378 kb on - strand, within GFF1531 at 129.378 kb on - strand, within GFF1531 at 129.378 kb on - strand, within GFF1531 at 129.378 kb on - strand, within GFF1531 at 129.458 kb on + strand, within GFF1531 at 129.458 kb on + strand, within GFF1531 at 129.650 kb on + strand, within GFF1531 at 129.651 kb on - strand, within GFF1531 at 129.651 kb on - strand, within GFF1531 at 129.651 kb on - strand, within GFF1531 at 129.651 kb on - strand, within GFF1531 at 129.904 kb on - strand at 129.904 kb on - strand at 129.904 kb on - strand at 129.904 kb on - strand at 129.952 kb on - strand at 130.266 kb on + strand, within GFF1532 at 130.266 kb on + strand, within GFF1532 at 130.267 kb on - strand, within GFF1532 at 130.465 kb on - strand, within GFF1532 at 130.465 kb on - strand, within GFF1532 at 130.465 kb on - strand, within GFF1532 at 130.465 kb on - strand, within GFF1532 at 130.494 kb on + strand, within GFF1532 at 130.495 kb on - strand, within GFF1532
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 127,456 + -0.7 127,457 - +1.6 127,463 - -0.6 127,463 - -0.3 127,578 + +1.4 127,579 - +0.6 128,048 + GFF1530 0.61 -0.6 128,049 - GFF1530 0.62 -0.6 128,423 + +0.7 128,423 + -0.2 128,423 + +0.8 128,423 + -0.8 128,424 - +0.0 128,424 - -0.4 128,424 - +0.3 128,424 - -0.6 128,694 - GFF1531 0.19 +0.0 128,888 + GFF1531 0.32 +0.0 128,888 + GFF1531 0.32 +0.1 129,074 + GFF1531 0.45 -0.5 129,074 + GFF1531 0.45 +0.2 129,161 - GFF1531 0.51 -0.2 129,209 + GFF1531 0.54 -0.2 129,209 + GFF1531 0.54 +0.3 129,377 + GFF1531 0.66 -0.2 129,377 + GFF1531 0.66 -0.4 129,377 + GFF1531 0.66 -1.3 129,378 - GFF1531 0.66 -0.2 129,378 - GFF1531 0.66 +0.3 129,378 - GFF1531 0.66 -0.4 129,378 - GFF1531 0.66 -1.5 129,458 + GFF1531 0.71 -0.9 129,458 + GFF1531 0.71 -0.7 129,650 + GFF1531 0.84 -1.5 129,651 - GFF1531 0.84 -1.0 129,651 - GFF1531 0.84 +0.6 129,651 - GFF1531 0.84 -1.6 129,651 - GFF1531 0.84 +1.6 129,904 - +1.0 129,904 - -0.0 129,904 - +0.5 129,904 - -0.3 129,952 - -0.1 130,266 + GFF1532 0.31 -1.0 130,266 + GFF1532 0.31 +0.5 130,267 - GFF1532 0.31 -0.7 130,465 - GFF1532 0.51 -1.0 130,465 - GFF1532 0.51 +0.3 130,465 - GFF1532 0.51 -0.4 130,465 - GFF1532 0.51 +1.6 130,494 + GFF1532 0.54 +0.5 130,495 - GFF1532 0.54 +0.1
Or see this region's nucleotide sequence