Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1431 and GFF1432 overlap by 4 nucleotides GFF1432 and GFF1433 are separated by 62 nucleotides GFF1433 and GFF1434 are separated by 21 nucleotides GFF1434 and GFF1435 are separated by 109 nucleotides
GFF1431 - no description, at 21,938 to 22,504
GFF1431
GFF1432 - no description, at 22,501 to 23,301
GFF1432
GFF1433 - hypothetical protein, at 23,364 to 24,764
GFF1433
GFF1434 - hypothetical protein, at 24,786 to 25,469
GFF1434
GFF1435 - BUG/TctC family periplasmic protein, at 25,579 to 26,580
GFF1435
Position (kb) 23
24
25 Strain fitness (log2 ratio) -1
0
1 at 22.452 kb on + strand at 22.651 kb on + strand, within GFF1432 at 23.215 kb on + strand, within GFF1432 at 23.216 kb on - strand, within GFF1432 at 23.216 kb on - strand, within GFF1432 at 23.440 kb on - strand at 23.547 kb on + strand, within GFF1433 at 23.548 kb on - strand, within GFF1433 at 23.548 kb on - strand, within GFF1433 at 23.548 kb on - strand, within GFF1433 at 23.548 kb on - strand, within GFF1433 at 23.796 kb on + strand, within GFF1433 at 23.797 kb on - strand, within GFF1433 at 23.797 kb on - strand, within GFF1433 at 24.160 kb on - strand, within GFF1433 at 24.213 kb on + strand, within GFF1433 at 24.214 kb on - strand, within GFF1433 at 24.214 kb on - strand, within GFF1433 at 24.216 kb on + strand, within GFF1433 at 24.340 kb on - strand, within GFF1433 at 24.480 kb on + strand, within GFF1433 at 24.480 kb on + strand, within GFF1433 at 24.481 kb on - strand, within GFF1433 at 24.481 kb on - strand, within GFF1433 at 24.519 kb on + strand, within GFF1433 at 24.519 kb on + strand, within GFF1433 at 24.520 kb on - strand, within GFF1433 at 24.520 kb on - strand, within GFF1433 at 24.520 kb on - strand, within GFF1433 at 24.675 kb on + strand at 25.309 kb on + strand, within GFF1434 at 25.321 kb on + strand, within GFF1434 at 25.321 kb on + strand, within GFF1434 at 25.462 kb on + strand at 25.463 kb on - strand at 25.463 kb on - strand at 25.463 kb on - strand at 25.511 kb on + strand at 25.511 kb on + strand at 25.511 kb on + strand at 25.512 kb on - strand at 25.512 kb on - strand at 25.548 kb on + strand at 25.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 22,452 + +0.3 22,651 + GFF1432 0.19 -0.3 23,215 + GFF1432 0.89 -0.2 23,216 - GFF1432 0.89 -0.7 23,216 - GFF1432 0.89 +1.0 23,440 - -0.1 23,547 + GFF1433 0.13 +0.1 23,548 - GFF1433 0.13 +0.2 23,548 - GFF1433 0.13 +0.8 23,548 - GFF1433 0.13 -0.8 23,548 - GFF1433 0.13 +0.3 23,796 + GFF1433 0.31 -1.1 23,797 - GFF1433 0.31 +0.3 23,797 - GFF1433 0.31 +1.1 24,160 - GFF1433 0.57 -1.6 24,213 + GFF1433 0.61 -0.0 24,214 - GFF1433 0.61 +0.3 24,214 - GFF1433 0.61 +0.3 24,216 + GFF1433 0.61 -0.2 24,340 - GFF1433 0.70 +0.1 24,480 + GFF1433 0.80 -0.1 24,480 + GFF1433 0.80 -0.2 24,481 - GFF1433 0.80 -1.2 24,481 - GFF1433 0.80 +0.1 24,519 + GFF1433 0.82 -0.1 24,519 + GFF1433 0.82 +0.5 24,520 - GFF1433 0.83 +0.8 24,520 - GFF1433 0.83 -0.5 24,520 - GFF1433 0.83 +0.1 24,675 + -0.1 25,309 + GFF1434 0.76 +0.3 25,321 + GFF1434 0.78 +1.2 25,321 + GFF1434 0.78 +0.4 25,462 + +0.6 25,463 - -0.1 25,463 - +0.1 25,463 - -0.7 25,511 + +1.1 25,511 + -0.1 25,511 + -0.3 25,512 - +0.4 25,512 - -0.2 25,548 + +0.3 25,548 + +0.1
Or see this region's nucleotide sequence