Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1358 and GFF1359 are separated by 104 nucleotides GFF1359 and GFF1360 are separated by 14 nucleotides GFF1360 and GFF1361 are separated by 14 nucleotides
GFF1358 - Transcriptional regulator, LysR family, at 700,562 to 701,557
GFF1358
GFF1359 - FMN-dependent NADH-azoreductase (EC 1.7.1.6), at 701,662 to 702,348
GFF1359
GFF1360 - 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222), at 702,363 to 703,067
GFF1360
GFF1361 - no description, at 703,082 to 703,465
GFF1361
Position (kb) 701
702
703 Strain fitness (log2 ratio) -2
-1
0
1
2 at 700.716 kb on + strand, within GFF1358 at 700.716 kb on + strand, within GFF1358 at 700.716 kb on + strand, within GFF1358 at 700.716 kb on + strand, within GFF1358 at 700.716 kb on + strand, within GFF1358 at 700.717 kb on - strand, within GFF1358 at 700.717 kb on - strand, within GFF1358 at 700.717 kb on - strand, within GFF1358 at 700.717 kb on - strand, within GFF1358 at 701.037 kb on + strand, within GFF1358 at 701.038 kb on - strand, within GFF1358 at 701.137 kb on + strand, within GFF1358 at 701.600 kb on - strand at 701.643 kb on + strand at 701.643 kb on + strand at 701.643 kb on + strand at 701.643 kb on + strand at 701.643 kb on + strand at 701.643 kb on + strand at 701.644 kb on - strand at 701.644 kb on - strand at 701.682 kb on + strand at 701.683 kb on - strand at 701.683 kb on - strand at 701.803 kb on + strand, within GFF1359 at 701.804 kb on - strand, within GFF1359 at 701.804 kb on - strand, within GFF1359 at 701.974 kb on + strand, within GFF1359 at 701.974 kb on + strand, within GFF1359 at 701.975 kb on - strand, within GFF1359 at 701.975 kb on - strand, within GFF1359 at 701.975 kb on - strand, within GFF1359 at 701.975 kb on - strand, within GFF1359 at 701.975 kb on - strand, within GFF1359 at 702.116 kb on + strand, within GFF1359 at 702.116 kb on + strand, within GFF1359 at 702.117 kb on - strand, within GFF1359 at 702.117 kb on - strand, within GFF1359 at 702.117 kb on - strand, within GFF1359 at 702.139 kb on + strand, within GFF1359 at 702.140 kb on - strand, within GFF1359 at 702.205 kb on + strand, within GFF1359 at 702.205 kb on + strand, within GFF1359 at 702.205 kb on + strand, within GFF1359 at 702.205 kb on + strand, within GFF1359 at 702.205 kb on + strand, within GFF1359 at 702.391 kb on + strand at 702.392 kb on - strand at 702.442 kb on + strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.443 kb on - strand, within GFF1360 at 702.526 kb on + strand, within GFF1360 at 702.526 kb on + strand, within GFF1360 at 702.526 kb on + strand, within GFF1360 at 702.526 kb on + strand, within GFF1360 at 703.137 kb on + strand, within GFF1361 at 703.137 kb on + strand, within GFF1361 at 703.137 kb on + strand, within GFF1361
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 700,716 + GFF1358 0.15 -0.0 700,716 + GFF1358 0.15 -2.1 700,716 + GFF1358 0.15 -0.0 700,716 + GFF1358 0.15 +0.8 700,716 + GFF1358 0.15 +1.2 700,717 - GFF1358 0.16 -0.2 700,717 - GFF1358 0.16 -0.6 700,717 - GFF1358 0.16 +1.6 700,717 - GFF1358 0.16 -0.5 701,037 + GFF1358 0.48 -0.6 701,038 - GFF1358 0.48 -0.2 701,137 + GFF1358 0.58 -0.2 701,600 - +0.2 701,643 + -0.9 701,643 + -0.9 701,643 + -0.5 701,643 + -0.2 701,643 + -0.1 701,643 + -1.6 701,644 - -1.6 701,644 - -0.6 701,682 + -0.4 701,683 - -0.9 701,683 - +0.6 701,803 + GFF1359 0.21 +0.9 701,804 - GFF1359 0.21 -0.4 701,804 - GFF1359 0.21 +0.6 701,974 + GFF1359 0.45 -0.9 701,974 + GFF1359 0.45 -0.1 701,975 - GFF1359 0.46 -0.2 701,975 - GFF1359 0.46 +0.1 701,975 - GFF1359 0.46 +2.2 701,975 - GFF1359 0.46 -0.5 701,975 - GFF1359 0.46 +1.8 702,116 + GFF1359 0.66 -0.1 702,116 + GFF1359 0.66 -1.7 702,117 - GFF1359 0.66 -0.4 702,117 - GFF1359 0.66 -0.6 702,117 - GFF1359 0.66 +0.1 702,139 + GFF1359 0.69 +0.1 702,140 - GFF1359 0.70 -0.8 702,205 + GFF1359 0.79 -0.6 702,205 + GFF1359 0.79 -0.9 702,205 + GFF1359 0.79 +0.1 702,205 + GFF1359 0.79 -0.5 702,205 + GFF1359 0.79 -1.6 702,391 + -0.4 702,392 - -0.4 702,442 + GFF1360 0.11 -0.2 702,443 - GFF1360 0.11 -2.4 702,443 - GFF1360 0.11 -0.8 702,443 - GFF1360 0.11 -0.1 702,443 - GFF1360 0.11 -0.2 702,443 - GFF1360 0.11 -0.3 702,443 - GFF1360 0.11 -0.2 702,443 - GFF1360 0.11 -0.0 702,526 + GFF1360 0.23 -0.1 702,526 + GFF1360 0.23 +0.7 702,526 + GFF1360 0.23 -1.0 702,526 + GFF1360 0.23 -0.4 703,137 + GFF1361 0.14 -1.1 703,137 + GFF1361 0.14 +0.1 703,137 + GFF1361 0.14 -0.7
Or see this region's nucleotide sequence