Experiment: no phage control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1273 and GFF1274 are separated by 141 nucleotides GFF1274 and GFF1275 are separated by 4 nucleotides GFF1275 and GFF1276 are separated by 72 nucleotides
GFF1273 - no description, at 603,833 to 604,066
GFF1273
GFF1274 - Glutamate racemase (EC 5.1.1.3), at 604,208 to 604,903
GFF1274
GFF1275 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 604,908 to 605,840
GFF1275
GFF1276 - Sarcosine oxidase, at 605,913 to 607,136
GFF1276
Position (kb) 604
605
606 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.955 kb on - strand, within GFF1273 at 603.955 kb on - strand, within GFF1273 at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.070 kb on - strand at 604.070 kb on - strand at 604.070 kb on - strand at 604.070 kb on - strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.147 kb on + strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.148 kb on - strand at 604.154 kb on + strand at 604.154 kb on + strand at 604.154 kb on + strand at 604.154 kb on + strand at 604.154 kb on + strand at 604.154 kb on + strand at 604.154 kb on + strand at 604.155 kb on - strand at 604.155 kb on - strand at 604.155 kb on - strand at 604.155 kb on - strand at 604.155 kb on - strand at 604.155 kb on - strand at 604.209 kb on + strand at 604.209 kb on + strand at 604.210 kb on - strand at 604.301 kb on + strand, within GFF1274 at 604.301 kb on + strand, within GFF1274 at 604.301 kb on + strand, within GFF1274 at 604.301 kb on + strand, within GFF1274 at 604.301 kb on + strand, within GFF1274 at 604.301 kb on + strand, within GFF1274 at 604.302 kb on - strand, within GFF1274 at 604.419 kb on + strand, within GFF1274 at 604.728 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.729 kb on + strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.730 kb on - strand, within GFF1274 at 604.939 kb on + strand at 604.939 kb on + strand at 604.939 kb on + strand at 604.939 kb on + strand at 604.939 kb on + strand at 604.939 kb on + strand at 604.939 kb on + strand at 604.939 kb on + strand at 604.940 kb on - strand at 604.940 kb on - strand at 604.957 kb on + strand at 604.957 kb on + strand at 604.957 kb on + strand at 604.957 kb on + strand at 604.957 kb on + strand at 604.957 kb on + strand at 604.957 kb on + strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 604.958 kb on - strand at 605.068 kb on + strand, within GFF1275 at 605.068 kb on + strand, within GFF1275 at 605.068 kb on + strand, within GFF1275 at 605.068 kb on + strand, within GFF1275 at 605.068 kb on + strand, within GFF1275 at 605.068 kb on + strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.069 kb on - strand, within GFF1275 at 605.399 kb on - strand, within GFF1275 at 605.466 kb on - strand, within GFF1275 at 605.605 kb on + strand, within GFF1275 at 605.605 kb on + strand, within GFF1275 at 605.605 kb on + strand, within GFF1275 at 605.605 kb on + strand, within GFF1275 at 605.606 kb on - strand, within GFF1275 at 605.606 kb on - strand, within GFF1275 at 605.606 kb on - strand, within GFF1275 at 605.606 kb on - strand, within GFF1275 at 605.636 kb on - strand, within GFF1275 at 605.800 kb on + strand at 605.801 kb on - strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.985 kb on + strand at 605.986 kb on - strand at 605.986 kb on - strand at 605.986 kb on - strand at 605.986 kb on - strand at 605.986 kb on - strand at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.118 kb on + strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.119 kb on - strand, within GFF1276 at 606.188 kb on - strand, within GFF1276 at 606.188 kb on - strand, within GFF1276 at 606.188 kb on - strand, within GFF1276 at 606.188 kb on - strand, within GFF1276 at 606.188 kb on - strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.253 kb on + strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.254 kb on - strand, within GFF1276 at 606.309 kb on + strand, within GFF1276 at 606.310 kb on + strand, within GFF1276 at 606.310 kb on + strand, within GFF1276 at 606.310 kb on + strand, within GFF1276 at 606.310 kb on + strand, within GFF1276 at 606.310 kb on + strand, within GFF1276 at 606.311 kb on - strand, within GFF1276 at 606.311 kb on - strand, within GFF1276 at 606.311 kb on - strand, within GFF1276 at 606.311 kb on - strand, within GFF1276 at 606.311 kb on - strand, within GFF1276 at 606.311 kb on - strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.316 kb on + strand, within GFF1276 at 606.317 kb on - strand, within GFF1276 at 606.317 kb on - strand, within GFF1276 at 606.317 kb on - strand, within GFF1276 at 606.317 kb on - strand, within GFF1276 at 606.692 kb on - strand, within GFF1276
Per-strain Table
Position Strand Gene LocusTag Fraction no phage control remove 603,954 + GFF1273 0.52 -0.5 603,954 + GFF1273 0.52 -0.9 603,954 + GFF1273 0.52 +1.1 603,954 + GFF1273 0.52 +0.3 603,954 + GFF1273 0.52 +1.0 603,954 + GFF1273 0.52 -0.9 603,954 + GFF1273 0.52 -0.1 603,954 + GFF1273 0.52 -0.8 603,955 - GFF1273 0.52 +0.4 603,955 - GFF1273 0.52 +0.2 604,069 + +1.5 604,069 + -0.1 604,069 + -0.7 604,069 + -1.1 604,069 + +0.5 604,069 + -0.2 604,069 + +1.9 604,069 + -0.1 604,069 + +0.3 604,069 + -0.3 604,070 - +1.2 604,070 - -0.2 604,070 - -0.1 604,070 - -0.6 604,147 + -0.6 604,147 + -0.4 604,147 + +0.1 604,147 + +0.7 604,147 + +0.0 604,147 + -0.4 604,147 + -0.4 604,147 + +0.3 604,147 + -0.4 604,147 + +0.0 604,147 + +1.7 604,147 + +1.2 604,148 - -0.6 604,148 - -0.1 604,148 - -0.1 604,148 - -0.9 604,148 - -0.4 604,148 - +1.2 604,148 - +0.1 604,148 - +0.2 604,148 - -0.9 604,154 + +1.5 604,154 + -0.4 604,154 + +0.3 604,154 + -0.3 604,154 + +0.6 604,154 + -0.6 604,154 + -0.7 604,155 - +1.2 604,155 - +0.3 604,155 - -0.5 604,155 - -0.5 604,155 - -1.4 604,155 - +1.0 604,209 + -0.4 604,209 + +2.5 604,210 - -0.4 604,301 + GFF1274 0.13 -0.2 604,301 + GFF1274 0.13 +0.2 604,301 + GFF1274 0.13 -0.5 604,301 + GFF1274 0.13 -0.2 604,301 + GFF1274 0.13 -0.2 604,301 + GFF1274 0.13 -0.2 604,302 - GFF1274 0.14 -0.1 604,419 + GFF1274 0.30 +1.1 604,728 + GFF1274 0.75 -1.2 604,729 + GFF1274 0.75 +0.2 604,729 + GFF1274 0.75 -0.2 604,729 + GFF1274 0.75 -0.0 604,729 + GFF1274 0.75 -1.1 604,729 + GFF1274 0.75 -1.6 604,729 + GFF1274 0.75 +0.3 604,729 + GFF1274 0.75 -0.1 604,729 + GFF1274 0.75 +0.2 604,729 + GFF1274 0.75 -0.5 604,730 - GFF1274 0.75 -0.6 604,730 - GFF1274 0.75 +0.5 604,730 - GFF1274 0.75 -0.1 604,730 - GFF1274 0.75 +1.0 604,730 - GFF1274 0.75 +0.8 604,730 - GFF1274 0.75 -2.9 604,730 - GFF1274 0.75 -0.8 604,939 + +0.6 604,939 + -1.6 604,939 + +0.6 604,939 + +0.0 604,939 + -0.3 604,939 + +0.4 604,939 + +0.5 604,939 + -0.9 604,940 - -1.1 604,940 - +0.2 604,957 + -0.4 604,957 + +0.6 604,957 + -0.5 604,957 + +1.2 604,957 + +0.1 604,957 + -0.3 604,957 + -1.6 604,958 - -0.2 604,958 - +0.4 604,958 - +0.2 604,958 - -0.4 604,958 - -0.5 604,958 - +1.2 604,958 - -0.3 604,958 - -0.2 604,958 - -0.1 605,068 + GFF1275 0.17 -0.0 605,068 + GFF1275 0.17 -0.0 605,068 + GFF1275 0.17 -0.5 605,068 + GFF1275 0.17 +0.1 605,068 + GFF1275 0.17 -0.4 605,068 + GFF1275 0.17 +0.1 605,069 - GFF1275 0.17 -0.0 605,069 - GFF1275 0.17 +0.6 605,069 - GFF1275 0.17 -0.4 605,069 - GFF1275 0.17 +0.5 605,069 - GFF1275 0.17 -0.9 605,069 - GFF1275 0.17 -0.2 605,069 - GFF1275 0.17 -0.2 605,069 - GFF1275 0.17 -0.2 605,069 - GFF1275 0.17 +0.7 605,069 - GFF1275 0.17 +0.9 605,399 - GFF1275 0.53 -0.2 605,466 - GFF1275 0.60 -0.4 605,605 + GFF1275 0.75 -0.9 605,605 + GFF1275 0.75 +0.2 605,605 + GFF1275 0.75 +0.3 605,605 + GFF1275 0.75 -0.5 605,606 - GFF1275 0.75 +0.1 605,606 - GFF1275 0.75 +0.5 605,606 - GFF1275 0.75 -0.8 605,606 - GFF1275 0.75 -0.2 605,636 - GFF1275 0.78 +0.1 605,800 + +0.1 605,801 - -0.8 605,985 + -1.5 605,985 + -1.5 605,985 + -1.4 605,985 + -1.9 605,985 + -0.4 605,985 + +0.2 605,985 + +1.2 605,985 + -0.1 605,985 + +1.0 605,986 - -0.9 605,986 - +0.6 605,986 - +0.8 605,986 - +0.1 605,986 - +0.4 606,118 + GFF1276 0.17 +1.5 606,118 + GFF1276 0.17 +0.1 606,118 + GFF1276 0.17 -0.4 606,118 + GFF1276 0.17 -0.8 606,118 + GFF1276 0.17 +0.2 606,118 + GFF1276 0.17 +0.6 606,118 + GFF1276 0.17 -0.6 606,118 + GFF1276 0.17 -0.1 606,119 - GFF1276 0.17 -0.4 606,119 - GFF1276 0.17 -0.4 606,119 - GFF1276 0.17 -0.4 606,119 - GFF1276 0.17 +0.0 606,119 - GFF1276 0.17 -0.4 606,119 - GFF1276 0.17 -0.0 606,119 - GFF1276 0.17 +0.8 606,119 - GFF1276 0.17 -0.5 606,119 - GFF1276 0.17 -1.0 606,119 - GFF1276 0.17 -0.4 606,119 - GFF1276 0.17 -1.2 606,188 - GFF1276 0.22 +0.1 606,188 - GFF1276 0.22 -0.7 606,188 - GFF1276 0.22 -0.4 606,188 - GFF1276 0.22 -0.1 606,188 - GFF1276 0.22 -1.0 606,253 + GFF1276 0.28 -0.1 606,253 + GFF1276 0.28 +0.6 606,253 + GFF1276 0.28 -0.6 606,253 + GFF1276 0.28 -0.1 606,253 + GFF1276 0.28 -1.1 606,253 + GFF1276 0.28 +0.2 606,253 + GFF1276 0.28 +0.1 606,253 + GFF1276 0.28 -0.3 606,254 - GFF1276 0.28 -0.8 606,254 - GFF1276 0.28 -0.8 606,254 - GFF1276 0.28 -0.2 606,254 - GFF1276 0.28 +1.2 606,254 - GFF1276 0.28 -0.1 606,254 - GFF1276 0.28 -0.4 606,254 - GFF1276 0.28 -0.6 606,309 + GFF1276 0.32 -0.3 606,310 + GFF1276 0.32 +1.2 606,310 + GFF1276 0.32 -1.1 606,310 + GFF1276 0.32 +0.6 606,310 + GFF1276 0.32 -0.3 606,310 + GFF1276 0.32 -0.1 606,311 - GFF1276 0.33 -0.1 606,311 - GFF1276 0.33 -0.6 606,311 - GFF1276 0.33 -0.3 606,311 - GFF1276 0.33 -0.1 606,311 - GFF1276 0.33 -0.5 606,311 - GFF1276 0.33 -0.5 606,316 + GFF1276 0.33 +0.1 606,316 + GFF1276 0.33 -0.2 606,316 + GFF1276 0.33 -1.7 606,316 + GFF1276 0.33 +0.4 606,316 + GFF1276 0.33 -0.4 606,316 + GFF1276 0.33 -0.2 606,316 + GFF1276 0.33 +0.3 606,316 + GFF1276 0.33 +0.0 606,317 - GFF1276 0.33 -0.0 606,317 - GFF1276 0.33 -1.0 606,317 - GFF1276 0.33 +0.6 606,317 - GFF1276 0.33 +1.2 606,692 - GFF1276 0.64 -0.9
Or see this region's nucleotide sequence