Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03205 and OLJFJH_03210 are separated by 358 nucleotides OLJFJH_03210 and OLJFJH_03215 are separated by 89 nucleotides OLJFJH_03215 and OLJFJH_03220 are separated by 15 nucleotides
OLJFJH_03205: OLJFJH_03205 - DUF4354 domain-containing protein, at 599,086 to 599,466
_03205
OLJFJH_03210: OLJFJH_03210 - sugar dehydrogenase, at 599,825 to 600,613
_03210
OLJFJH_03215: OLJFJH_03215 - transcriptional regulator, at 600,703 to 601,017
_03215
OLJFJH_03220: OLJFJH_03220 - alkene reductase, at 601,033 to 602,157
_03220
Position (kb) 599
600
601 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 598.862 kb on + strand at 598.863 kb on - strand at 598.957 kb on - strand at 598.987 kb on + strand at 598.987 kb on + strand at 598.987 kb on + strand at 598.987 kb on + strand at 598.987 kb on + strand at 598.987 kb on + strand at 598.987 kb on + strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.988 kb on - strand at 598.992 kb on - strand at 599.003 kb on - strand at 599.048 kb on - strand at 599.073 kb on + strand at 599.073 kb on + strand at 599.082 kb on + strand at 599.083 kb on - strand at 599.094 kb on + strand at 599.095 kb on - strand at 599.190 kb on + strand, within OLJFJH_03205 at 599.220 kb on + strand, within OLJFJH_03205 at 599.220 kb on + strand, within OLJFJH_03205 at 599.221 kb on - strand, within OLJFJH_03205 at 599.221 kb on - strand, within OLJFJH_03205 at 599.224 kb on + strand, within OLJFJH_03205 at 599.225 kb on - strand, within OLJFJH_03205 at 599.225 kb on - strand, within OLJFJH_03205 at 599.225 kb on - strand, within OLJFJH_03205 at 599.412 kb on + strand, within OLJFJH_03205 at 599.413 kb on - strand, within OLJFJH_03205 at 599.618 kb on + strand at 599.618 kb on + strand at 599.618 kb on + strand at 599.620 kb on + strand at 599.620 kb on + strand at 599.620 kb on + strand at 599.620 kb on + strand at 599.620 kb on + strand at 599.621 kb on - strand at 599.621 kb on - strand at 599.622 kb on + strand at 599.623 kb on - strand at 599.623 kb on - strand at 599.623 kb on - strand at 599.662 kb on + strand at 599.760 kb on + strand at 599.784 kb on + strand at 599.821 kb on + strand at 599.824 kb on + strand at 599.824 kb on + strand at 599.824 kb on + strand at 599.824 kb on + strand at 599.825 kb on - strand at 599.825 kb on - strand at 599.825 kb on - strand at 599.825 kb on - strand at 599.829 kb on - strand at 599.829 kb on - strand at 599.829 kb on - strand at 599.936 kb on + strand, within OLJFJH_03210 at 599.936 kb on + strand, within OLJFJH_03210 at 599.937 kb on - strand, within OLJFJH_03210 at 600.010 kb on - strand, within OLJFJH_03210 at 600.010 kb on - strand, within OLJFJH_03210 at 600.097 kb on + strand, within OLJFJH_03210 at 600.097 kb on + strand, within OLJFJH_03210 at 600.101 kb on - strand, within OLJFJH_03210 at 600.185 kb on + strand, within OLJFJH_03210 at 600.215 kb on + strand, within OLJFJH_03210 at 600.244 kb on + strand, within OLJFJH_03210 at 600.264 kb on + strand, within OLJFJH_03210 at 600.274 kb on + strand, within OLJFJH_03210 at 600.299 kb on + strand, within OLJFJH_03210 at 600.454 kb on - strand, within OLJFJH_03210 at 600.615 kb on - strand at 600.615 kb on - strand at 600.773 kb on + strand, within OLJFJH_03215 at 600.773 kb on + strand, within OLJFJH_03215 at 600.773 kb on + strand, within OLJFJH_03215 at 600.773 kb on + strand, within OLJFJH_03215 at 600.774 kb on - strand, within OLJFJH_03215 at 600.774 kb on - strand, within OLJFJH_03215 at 600.774 kb on - strand, within OLJFJH_03215 at 600.818 kb on + strand, within OLJFJH_03215 at 600.819 kb on - strand, within OLJFJH_03215 at 600.829 kb on - strand, within OLJFJH_03215 at 600.844 kb on - strand, within OLJFJH_03215 at 600.844 kb on - strand, within OLJFJH_03215 at 600.844 kb on - strand, within OLJFJH_03215 at 600.856 kb on + strand, within OLJFJH_03215 at 600.912 kb on - strand, within OLJFJH_03215 at 600.913 kb on + strand, within OLJFJH_03215 at 600.913 kb on + strand, within OLJFJH_03215 at 600.913 kb on + strand, within OLJFJH_03215 at 600.913 kb on + strand, within OLJFJH_03215 at 600.913 kb on + strand, within OLJFJH_03215 at 600.914 kb on - strand, within OLJFJH_03215 at 600.914 kb on - strand, within OLJFJH_03215 at 600.914 kb on - strand, within OLJFJH_03215 at 600.914 kb on - strand, within OLJFJH_03215 at 600.914 kb on - strand, within OLJFJH_03215 at 600.924 kb on - strand, within OLJFJH_03215 at 600.952 kb on - strand, within OLJFJH_03215 at 600.992 kb on - strand at 601.060 kb on - strand at 601.060 kb on - strand at 601.226 kb on + strand, within OLJFJH_03220 at 601.238 kb on + strand, within OLJFJH_03220 at 601.239 kb on - strand, within OLJFJH_03220 at 601.239 kb on - strand, within OLJFJH_03220 at 601.239 kb on - strand, within OLJFJH_03220 at 601.242 kb on + strand, within OLJFJH_03220 at 601.375 kb on - strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.376 kb on + strand, within OLJFJH_03220 at 601.377 kb on - strand, within OLJFJH_03220 at 601.377 kb on - strand, within OLJFJH_03220 at 601.377 kb on - strand, within OLJFJH_03220 at 601.377 kb on - strand, within OLJFJH_03220 at 601.413 kb on - strand, within OLJFJH_03220 at 601.441 kb on + strand, within OLJFJH_03220 at 601.567 kb on - strand, within OLJFJH_03220 at 601.567 kb on - strand, within OLJFJH_03220
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-4 remove 598,862 + +2.5 598,863 - +0.1 598,957 - -0.1 598,987 + +3.1 598,987 + +0.6 598,987 + -0.9 598,987 + -1.5 598,987 + +0.3 598,987 + -0.3 598,987 + -1.4 598,988 - +0.7 598,988 - -0.6 598,988 - -0.5 598,988 - +0.5 598,988 - +1.1 598,988 - -0.3 598,988 - -1.3 598,988 - -0.6 598,988 - +0.9 598,988 - -1.1 598,992 - -0.2 599,003 - -0.9 599,048 - +1.6 599,073 + -1.5 599,073 + -1.7 599,082 + +1.3 599,083 - -0.9 599,094 + -0.0 599,095 - +1.2 599,190 + OLJFJH_03205 0.27 +0.5 599,220 + OLJFJH_03205 0.35 -1.1 599,220 + OLJFJH_03205 0.35 -0.4 599,221 - OLJFJH_03205 0.35 -0.4 599,221 - OLJFJH_03205 0.35 +2.7 599,224 + OLJFJH_03205 0.36 -0.3 599,225 - OLJFJH_03205 0.36 -1.7 599,225 - OLJFJH_03205 0.36 +4.0 599,225 - OLJFJH_03205 0.36 -0.9 599,412 + OLJFJH_03205 0.86 +1.0 599,413 - OLJFJH_03205 0.86 -3.3 599,618 + +0.1 599,618 + -0.5 599,618 + +0.5 599,620 + -1.4 599,620 + -0.4 599,620 + +0.2 599,620 + -0.9 599,620 + +1.8 599,621 - -0.3 599,621 - +2.3 599,622 + -0.6 599,623 - -0.6 599,623 - +2.2 599,623 - +0.7 599,662 + -0.4 599,760 + +4.2 599,784 + -0.3 599,821 + -0.7 599,824 + -0.8 599,824 + -0.6 599,824 + -1.1 599,824 + -0.2 599,825 - -0.2 599,825 - -0.6 599,825 - +0.1 599,825 - +0.3 599,829 - +0.1 599,829 - +0.2 599,829 - +0.9 599,936 + OLJFJH_03210 0.14 -0.5 599,936 + OLJFJH_03210 0.14 +1.1 599,937 - OLJFJH_03210 0.14 -0.3 600,010 - OLJFJH_03210 0.23 -1.6 600,010 - OLJFJH_03210 0.23 +1.8 600,097 + OLJFJH_03210 0.34 -0.7 600,097 + OLJFJH_03210 0.34 -1.1 600,101 - OLJFJH_03210 0.35 -0.7 600,185 + OLJFJH_03210 0.46 +2.4 600,215 + OLJFJH_03210 0.49 -1.3 600,244 + OLJFJH_03210 0.53 -0.6 600,264 + OLJFJH_03210 0.56 -2.5 600,274 + OLJFJH_03210 0.57 -0.8 600,299 + OLJFJH_03210 0.60 -1.9 600,454 - OLJFJH_03210 0.80 -1.6 600,615 - -0.6 600,615 - -0.4 600,773 + OLJFJH_03215 0.22 +0.1 600,773 + OLJFJH_03215 0.22 -0.4 600,773 + OLJFJH_03215 0.22 -0.3 600,773 + OLJFJH_03215 0.22 -0.7 600,774 - OLJFJH_03215 0.23 +0.3 600,774 - OLJFJH_03215 0.23 -0.4 600,774 - OLJFJH_03215 0.23 +0.3 600,818 + OLJFJH_03215 0.37 -0.6 600,819 - OLJFJH_03215 0.37 +0.2 600,829 - OLJFJH_03215 0.40 -1.1 600,844 - OLJFJH_03215 0.45 +1.6 600,844 - OLJFJH_03215 0.45 +0.1 600,844 - OLJFJH_03215 0.45 -2.3 600,856 + OLJFJH_03215 0.49 +0.3 600,912 - OLJFJH_03215 0.66 -0.3 600,913 + OLJFJH_03215 0.67 +2.5 600,913 + OLJFJH_03215 0.67 +0.3 600,913 + OLJFJH_03215 0.67 +0.7 600,913 + OLJFJH_03215 0.67 +0.6 600,913 + OLJFJH_03215 0.67 +0.9 600,914 - OLJFJH_03215 0.67 +0.6 600,914 - OLJFJH_03215 0.67 +0.3 600,914 - OLJFJH_03215 0.67 -0.1 600,914 - OLJFJH_03215 0.67 -0.4 600,914 - OLJFJH_03215 0.67 -0.5 600,924 - OLJFJH_03215 0.70 -0.9 600,952 - OLJFJH_03215 0.79 +1.1 600,992 - +1.7 601,060 - +1.6 601,060 - +1.8 601,226 + OLJFJH_03220 0.17 -0.5 601,238 + OLJFJH_03220 0.18 -0.1 601,239 - OLJFJH_03220 0.18 +0.9 601,239 - OLJFJH_03220 0.18 +1.2 601,239 - OLJFJH_03220 0.18 -1.3 601,242 + OLJFJH_03220 0.19 -0.0 601,375 - OLJFJH_03220 0.30 -0.6 601,376 + OLJFJH_03220 0.30 +0.0 601,376 + OLJFJH_03220 0.30 -0.6 601,376 + OLJFJH_03220 0.30 +0.4 601,376 + OLJFJH_03220 0.30 +1.0 601,376 + OLJFJH_03220 0.30 -1.3 601,376 + OLJFJH_03220 0.30 -0.3 601,376 + OLJFJH_03220 0.30 +2.0 601,376 + OLJFJH_03220 0.30 +0.1 601,376 + OLJFJH_03220 0.30 +0.5 601,376 + OLJFJH_03220 0.30 -0.5 601,377 - OLJFJH_03220 0.31 +0.2 601,377 - OLJFJH_03220 0.31 -0.6 601,377 - OLJFJH_03220 0.31 +0.5 601,377 - OLJFJH_03220 0.31 -0.9 601,413 - OLJFJH_03220 0.34 -2.4 601,441 + OLJFJH_03220 0.36 -0.1 601,567 - OLJFJH_03220 0.47 -2.1 601,567 - OLJFJH_03220 0.47 +0.5
Or see this region's nucleotide sequence