Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7232 and GFF7233 are separated by 87 nucleotides GFF7233 and GFF7234 are separated by 24 nucleotides GFF7234 and GFF7235 overlap by 4 nucleotides
GFF7232 - hypothetical protein, at 13,537 to 14,214
GFF7232
GFF7233 - no description, at 14,302 to 14,532
GFF7233
GFF7234 - Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), at 14,557 to 15,783
GFF7234
GFF7235 - FAD/FMN-containing dehydrogenase Mvan_5531, at 15,780 to 17,141
GFF7235
Position (kb) 14
15
16 Strain fitness (log2 ratio) -2
-1
0
1 at 13.597 kb on - strand at 13.597 kb on - strand at 13.597 kb on - strand at 14.268 kb on + strand at 14.268 kb on + strand at 14.268 kb on + strand at 14.268 kb on + strand at 14.360 kb on - strand, within GFF7233 at 14.752 kb on + strand, within GFF7234 at 14.753 kb on - strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.980 kb on + strand, within GFF7234 at 14.981 kb on - strand, within GFF7234 at 14.981 kb on - strand, within GFF7234 at 14.981 kb on - strand, within GFF7234 at 14.981 kb on - strand, within GFF7234 at 14.981 kb on - strand, within GFF7234 at 14.981 kb on - strand, within GFF7234 at 15.272 kb on - strand, within GFF7234 at 15.272 kb on - strand, within GFF7234 at 15.272 kb on - strand, within GFF7234 at 15.646 kb on + strand, within GFF7234 at 15.647 kb on - strand, within GFF7234 at 15.647 kb on - strand, within GFF7234 at 15.647 kb on - strand, within GFF7234 at 15.647 kb on - strand, within GFF7234 at 15.766 kb on + strand at 15.767 kb on - strand at 15.767 kb on - strand at 16.014 kb on + strand, within GFF7235 at 16.015 kb on - strand, within GFF7235 at 16.254 kb on + strand, within GFF7235 at 16.255 kb on - strand, within GFF7235 at 16.269 kb on + strand, within GFF7235 at 16.479 kb on + strand, within GFF7235 at 16.497 kb on + strand, within GFF7235 at 16.497 kb on + strand, within GFF7235 at 16.497 kb on + strand, within GFF7235 at 16.497 kb on + strand, within GFF7235 at 16.497 kb on + strand, within GFF7235 at 16.498 kb on - strand, within GFF7235 at 16.498 kb on - strand, within GFF7235 at 16.548 kb on + strand, within GFF7235 at 16.549 kb on - strand, within GFF7235 at 16.657 kb on - strand, within GFF7235 at 16.657 kb on - strand, within GFF7235
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 13,597 - -0.6 13,597 - +0.1 13,597 - +0.1 14,268 + +0.4 14,268 + +0.1 14,268 + -0.8 14,268 + +0.5 14,360 - GFF7233 0.25 +0.1 14,752 + GFF7234 0.16 -0.5 14,753 - GFF7234 0.16 -0.0 14,980 + GFF7234 0.34 -0.2 14,980 + GFF7234 0.34 -0.7 14,980 + GFF7234 0.34 +0.0 14,980 + GFF7234 0.34 +0.4 14,980 + GFF7234 0.34 -0.7 14,980 + GFF7234 0.34 -0.9 14,980 + GFF7234 0.34 -0.9 14,981 - GFF7234 0.35 -0.0 14,981 - GFF7234 0.35 -0.6 14,981 - GFF7234 0.35 +1.7 14,981 - GFF7234 0.35 -0.9 14,981 - GFF7234 0.35 -0.2 14,981 - GFF7234 0.35 -0.3 15,272 - GFF7234 0.58 -0.5 15,272 - GFF7234 0.58 -2.3 15,272 - GFF7234 0.58 -0.3 15,646 + GFF7234 0.89 -1.3 15,647 - GFF7234 0.89 -0.2 15,647 - GFF7234 0.89 -0.3 15,647 - GFF7234 0.89 -0.6 15,647 - GFF7234 0.89 +0.7 15,766 + +0.1 15,767 - -0.1 15,767 - +0.5 16,014 + GFF7235 0.17 +0.4 16,015 - GFF7235 0.17 +0.4 16,254 + GFF7235 0.35 -0.7 16,255 - GFF7235 0.35 -1.0 16,269 + GFF7235 0.36 -0.1 16,479 + GFF7235 0.51 -0.9 16,497 + GFF7235 0.53 -0.0 16,497 + GFF7235 0.53 -0.6 16,497 + GFF7235 0.53 -0.2 16,497 + GFF7235 0.53 -0.5 16,497 + GFF7235 0.53 +0.1 16,498 - GFF7235 0.53 -0.8 16,498 - GFF7235 0.53 -0.4 16,548 + GFF7235 0.56 -0.2 16,549 - GFF7235 0.56 +0.1 16,657 - GFF7235 0.64 +0.2 16,657 - GFF7235 0.64 +0.0
Or see this region's nucleotide sequence