Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6171 and GFF6172 are separated by 82 nucleotides GFF6172 and GFF6173 overlap by 1 nucleotides
GFF6171 - Na(+) H(+) antiporter subunit D, at 74,580 to 76,298
GFF6171
GFF6172 - Na(+) H(+) antiporter subunit C, at 76,381 to 76,731
GFF6172
GFF6173 - Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B, at 76,731 to 79,679
GFF6173
Position (kb) 76
77 Strain fitness (log2 ratio) -1
0
1 at 75.472 kb on + strand, within GFF6171 at 75.472 kb on + strand, within GFF6171 at 75.472 kb on + strand, within GFF6171 at 75.472 kb on + strand, within GFF6171 at 75.473 kb on - strand, within GFF6171 at 75.473 kb on - strand, within GFF6171 at 75.473 kb on - strand, within GFF6171 at 75.473 kb on - strand, within GFF6171 at 75.473 kb on - strand, within GFF6171 at 75.532 kb on + strand, within GFF6171 at 75.532 kb on + strand, within GFF6171 at 75.532 kb on + strand, within GFF6171 at 75.681 kb on - strand, within GFF6171 at 75.681 kb on - strand, within GFF6171 at 75.694 kb on + strand, within GFF6171 at 75.695 kb on - strand, within GFF6171 at 75.695 kb on - strand, within GFF6171 at 75.695 kb on - strand, within GFF6171 at 75.751 kb on + strand, within GFF6171 at 75.751 kb on + strand, within GFF6171 at 75.751 kb on + strand, within GFF6171 at 75.752 kb on - strand, within GFF6171 at 75.752 kb on - strand, within GFF6171 at 75.752 kb on - strand, within GFF6171 at 75.752 kb on - strand, within GFF6171 at 75.804 kb on + strand, within GFF6171 at 75.805 kb on + strand, within GFF6171 at 75.806 kb on - strand, within GFF6171 at 75.946 kb on + strand, within GFF6171 at 75.946 kb on + strand, within GFF6171 at 75.946 kb on + strand, within GFF6171 at 75.946 kb on + strand, within GFF6171 at 75.946 kb on + strand, within GFF6171 at 75.947 kb on - strand, within GFF6171 at 75.947 kb on - strand, within GFF6171 at 75.947 kb on - strand, within GFF6171 at 75.947 kb on - strand, within GFF6171 at 75.947 kb on - strand, within GFF6171 at 76.054 kb on + strand, within GFF6171 at 76.054 kb on + strand, within GFF6171 at 76.055 kb on - strand, within GFF6171 at 76.055 kb on - strand, within GFF6171 at 76.623 kb on - strand, within GFF6172 at 76.655 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.679 kb on + strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.680 kb on - strand, within GFF6172 at 76.727 kb on + strand at 76.811 kb on + strand at 77.038 kb on + strand, within GFF6173 at 77.038 kb on + strand, within GFF6173 at 77.038 kb on + strand, within GFF6173 at 77.038 kb on + strand, within GFF6173 at 77.039 kb on - strand, within GFF6173 at 77.164 kb on + strand, within GFF6173 at 77.164 kb on + strand, within GFF6173 at 77.164 kb on + strand, within GFF6173 at 77.164 kb on + strand, within GFF6173 at 77.164 kb on + strand, within GFF6173 at 77.227 kb on + strand, within GFF6173 at 77.228 kb on - strand, within GFF6173 at 77.228 kb on - strand, within GFF6173 at 77.356 kb on + strand, within GFF6173 at 77.356 kb on + strand, within GFF6173 at 77.356 kb on + strand, within GFF6173 at 77.356 kb on + strand, within GFF6173 at 77.356 kb on + strand, within GFF6173 at 77.357 kb on - strand, within GFF6173 at 77.357 kb on - strand, within GFF6173 at 77.357 kb on - strand, within GFF6173 at 77.357 kb on - strand, within GFF6173 at 77.357 kb on - strand, within GFF6173 at 77.357 kb on - strand, within GFF6173 at 77.357 kb on - strand, within GFF6173
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 75,472 + GFF6171 0.52 -0.0 75,472 + GFF6171 0.52 +1.1 75,472 + GFF6171 0.52 -0.4 75,472 + GFF6171 0.52 -0.4 75,473 - GFF6171 0.52 -0.1 75,473 - GFF6171 0.52 -1.7 75,473 - GFF6171 0.52 +0.5 75,473 - GFF6171 0.52 +0.1 75,473 - GFF6171 0.52 -0.6 75,532 + GFF6171 0.55 -0.2 75,532 + GFF6171 0.55 +0.3 75,532 + GFF6171 0.55 -0.3 75,681 - GFF6171 0.64 -0.4 75,681 - GFF6171 0.64 -0.8 75,694 + GFF6171 0.65 -0.1 75,695 - GFF6171 0.65 -0.5 75,695 - GFF6171 0.65 +1.1 75,695 - GFF6171 0.65 +0.1 75,751 + GFF6171 0.68 -0.1 75,751 + GFF6171 0.68 +0.4 75,751 + GFF6171 0.68 -0.7 75,752 - GFF6171 0.68 -0.2 75,752 - GFF6171 0.68 +0.0 75,752 - GFF6171 0.68 +1.1 75,752 - GFF6171 0.68 -0.4 75,804 + GFF6171 0.71 -1.0 75,805 + GFF6171 0.71 -0.9 75,806 - GFF6171 0.71 -0.1 75,946 + GFF6171 0.79 -0.4 75,946 + GFF6171 0.79 -0.2 75,946 + GFF6171 0.79 +0.2 75,946 + GFF6171 0.79 -0.5 75,946 + GFF6171 0.79 +1.3 75,947 - GFF6171 0.80 +1.1 75,947 - GFF6171 0.80 +1.1 75,947 - GFF6171 0.80 -0.3 75,947 - GFF6171 0.80 -0.5 75,947 - GFF6171 0.80 -0.2 76,054 + GFF6171 0.86 -1.3 76,054 + GFF6171 0.86 -0.1 76,055 - GFF6171 0.86 -0.1 76,055 - GFF6171 0.86 +0.1 76,623 - GFF6172 0.69 +0.2 76,655 + GFF6172 0.78 -0.0 76,679 + GFF6172 0.85 +0.5 76,679 + GFF6172 0.85 +0.0 76,679 + GFF6172 0.85 +0.3 76,679 + GFF6172 0.85 -0.3 76,679 + GFF6172 0.85 +0.3 76,679 + GFF6172 0.85 +0.4 76,679 + GFF6172 0.85 -0.1 76,679 + GFF6172 0.85 +0.5 76,679 + GFF6172 0.85 +0.5 76,680 - GFF6172 0.85 -0.2 76,680 - GFF6172 0.85 +0.9 76,680 - GFF6172 0.85 +0.3 76,680 - GFF6172 0.85 +0.0 76,680 - GFF6172 0.85 -0.1 76,680 - GFF6172 0.85 -0.0 76,680 - GFF6172 0.85 +0.1 76,680 - GFF6172 0.85 -0.4 76,680 - GFF6172 0.85 +1.5 76,727 + +0.2 76,811 + -0.2 77,038 + GFF6173 0.10 -0.5 77,038 + GFF6173 0.10 -0.8 77,038 + GFF6173 0.10 -0.7 77,038 + GFF6173 0.10 +0.1 77,039 - GFF6173 0.10 -1.5 77,164 + GFF6173 0.15 -0.6 77,164 + GFF6173 0.15 +0.2 77,164 + GFF6173 0.15 -0.2 77,164 + GFF6173 0.15 -0.1 77,164 + GFF6173 0.15 +0.0 77,227 + GFF6173 0.17 -0.4 77,228 - GFF6173 0.17 +0.2 77,228 - GFF6173 0.17 -0.1 77,356 + GFF6173 0.21 +0.1 77,356 + GFF6173 0.21 -0.3 77,356 + GFF6173 0.21 -0.0 77,356 + GFF6173 0.21 -0.1 77,356 + GFF6173 0.21 -0.7 77,357 - GFF6173 0.21 -0.8 77,357 - GFF6173 0.21 +0.3 77,357 - GFF6173 0.21 -0.7 77,357 - GFF6173 0.21 +0.3 77,357 - GFF6173 0.21 -1.5 77,357 - GFF6173 0.21 +0.6 77,357 - GFF6173 0.21 +1.0
Or see this region's nucleotide sequence