Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5842 and GFF5843 overlap by 4 nucleotides GFF5843 and GFF5844 overlap by 4 nucleotides
GFF5842 - ATP-dependent DNA helicase Rep, at 18,658 to 20,760
GFF5842
GFF5843 - hypothetical protein, at 20,757 to 21,236
GFF5843
GFF5844 - Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A, at 21,233 to 22,399
GFF5844
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2 at 20.967 kb on + strand, within GFF5843 at 20.968 kb on - strand, within GFF5843 at 20.968 kb on - strand, within GFF5843 at 21.567 kb on - strand, within GFF5844 at 21.728 kb on + strand, within GFF5844 at 21.729 kb on - strand, within GFF5844 at 21.833 kb on + strand, within GFF5844 at 21.834 kb on - strand, within GFF5844 at 21.834 kb on - strand, within GFF5844 at 21.835 kb on + strand, within GFF5844 at 21.835 kb on + strand, within GFF5844 at 21.835 kb on + strand, within GFF5844 at 21.836 kb on - strand, within GFF5844 at 21.836 kb on - strand, within GFF5844 at 21.836 kb on - strand, within GFF5844 at 21.836 kb on - strand, within GFF5844 at 21.836 kb on - strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.917 kb on + strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.918 kb on - strand, within GFF5844 at 21.966 kb on - strand, within GFF5844 at 22.037 kb on + strand, within GFF5844 at 22.038 kb on - strand, within GFF5844 at 22.038 kb on - strand, within GFF5844 at 22.038 kb on - strand, within GFF5844 at 22.145 kb on + strand, within GFF5844 at 22.146 kb on - strand, within GFF5844 at 22.146 kb on - strand, within GFF5844 at 22.146 kb on - strand, within GFF5844
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 20,967 + GFF5843 0.44 +0.6 20,968 - GFF5843 0.44 +0.1 20,968 - GFF5843 0.44 +1.6 21,567 - GFF5844 0.29 -0.1 21,728 + GFF5844 0.42 +0.1 21,729 - GFF5844 0.43 -0.7 21,833 + GFF5844 0.51 -0.9 21,834 - GFF5844 0.51 +1.0 21,834 - GFF5844 0.51 -0.4 21,835 + GFF5844 0.52 -1.8 21,835 + GFF5844 0.52 +1.1 21,835 + GFF5844 0.52 +0.2 21,836 - GFF5844 0.52 -1.1 21,836 - GFF5844 0.52 -0.3 21,836 - GFF5844 0.52 -1.1 21,836 - GFF5844 0.52 -0.5 21,836 - GFF5844 0.52 +0.0 21,917 + GFF5844 0.59 +0.1 21,917 + GFF5844 0.59 -0.2 21,917 + GFF5844 0.59 -0.1 21,917 + GFF5844 0.59 -0.1 21,917 + GFF5844 0.59 -1.1 21,917 + GFF5844 0.59 +0.1 21,917 + GFF5844 0.59 +0.2 21,917 + GFF5844 0.59 -1.1 21,917 + GFF5844 0.59 +1.2 21,917 + GFF5844 0.59 +0.4 21,917 + GFF5844 0.59 -2.6 21,917 + GFF5844 0.59 -0.6 21,917 + GFF5844 0.59 -0.2 21,917 + GFF5844 0.59 -0.2 21,917 + GFF5844 0.59 +0.7 21,917 + GFF5844 0.59 +0.6 21,917 + GFF5844 0.59 +0.7 21,917 + GFF5844 0.59 -0.7 21,918 - GFF5844 0.59 -0.0 21,918 - GFF5844 0.59 +0.1 21,918 - GFF5844 0.59 -0.2 21,918 - GFF5844 0.59 +1.9 21,918 - GFF5844 0.59 +0.5 21,918 - GFF5844 0.59 -0.8 21,918 - GFF5844 0.59 -0.9 21,918 - GFF5844 0.59 -0.2 21,918 - GFF5844 0.59 -1.0 21,918 - GFF5844 0.59 -0.0 21,918 - GFF5844 0.59 -0.3 21,918 - GFF5844 0.59 +0.3 21,918 - GFF5844 0.59 -0.6 21,918 - GFF5844 0.59 -0.6 21,918 - GFF5844 0.59 -1.0 21,918 - GFF5844 0.59 +0.1 21,918 - GFF5844 0.59 -0.0 21,918 - GFF5844 0.59 -0.4 21,918 - GFF5844 0.59 -0.7 21,918 - GFF5844 0.59 -0.1 21,918 - GFF5844 0.59 +0.7 21,918 - GFF5844 0.59 -0.5 21,918 - GFF5844 0.59 -0.7 21,918 - GFF5844 0.59 -0.3 21,918 - GFF5844 0.59 -0.8 21,966 - GFF5844 0.63 -0.2 22,037 + GFF5844 0.69 -0.3 22,038 - GFF5844 0.69 +0.2 22,038 - GFF5844 0.69 +1.0 22,038 - GFF5844 0.69 -0.4 22,145 + GFF5844 0.78 +0.4 22,146 - GFF5844 0.78 -0.8 22,146 - GFF5844 0.78 +0.7 22,146 - GFF5844 0.78 -0.9
Or see this region's nucleotide sequence