Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5642 and GFF5643 are separated by 433 nucleotides GFF5643 and GFF5644 are separated by 109 nucleotides
GFF5642 - Sulfur carrier protein FdhD, at 17,126 to 18,019
GFF5642
GFF5643 - no description, at 18,453 to 19,208
GFF5643
GFF5644 - Selenophosphate-dependent tRNA 2-selenouridine synthase, at 19,318 to 20,367
GFF5644
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 17.991 kb on - strand at 17.991 kb on - strand at 18.052 kb on + strand at 18.053 kb on - strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.110 kb on + strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.111 kb on - strand at 18.114 kb on + strand at 18.114 kb on + strand at 18.114 kb on + strand at 18.115 kb on - strand at 18.198 kb on + strand at 18.198 kb on + strand at 18.199 kb on - strand at 18.199 kb on - strand at 18.326 kb on + strand at 18.327 kb on - strand at 18.542 kb on - strand, within GFF5643 at 18.576 kb on + strand, within GFF5643 at 18.576 kb on + strand, within GFF5643 at 18.577 kb on - strand, within GFF5643 at 18.577 kb on - strand, within GFF5643 at 18.577 kb on - strand, within GFF5643 at 18.577 kb on - strand, within GFF5643 at 18.798 kb on + strand, within GFF5643 at 18.798 kb on + strand, within GFF5643 at 18.799 kb on - strand, within GFF5643 at 18.799 kb on - strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.804 kb on + strand, within GFF5643 at 18.805 kb on - strand, within GFF5643 at 18.805 kb on - strand, within GFF5643 at 18.805 kb on - strand, within GFF5643 at 18.881 kb on + strand, within GFF5643 at 18.881 kb on + strand, within GFF5643 at 18.881 kb on + strand, within GFF5643 at 18.881 kb on + strand, within GFF5643 at 18.881 kb on + strand, within GFF5643 at 18.882 kb on - strand, within GFF5643 at 18.882 kb on - strand, within GFF5643 at 18.882 kb on - strand, within GFF5643 at 18.882 kb on - strand, within GFF5643 at 18.882 kb on - strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on + strand, within GFF5643 at 18.885 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 18.886 kb on - strand, within GFF5643 at 19.176 kb on + strand at 19.176 kb on + strand at 19.176 kb on + strand at 19.176 kb on + strand at 19.176 kb on + strand at 19.176 kb on + strand at 19.176 kb on + strand at 19.176 kb on + strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.177 kb on - strand at 19.178 kb on + strand at 19.178 kb on + strand at 19.178 kb on + strand at 19.179 kb on - strand at 19.179 kb on - strand at 19.179 kb on - strand at 19.436 kb on + strand, within GFF5644 at 19.436 kb on + strand, within GFF5644 at 19.436 kb on + strand, within GFF5644 at 19.448 kb on + strand, within GFF5644 at 19.448 kb on + strand, within GFF5644 at 19.448 kb on + strand, within GFF5644 at 19.448 kb on + strand, within GFF5644 at 19.449 kb on - strand, within GFF5644 at 19.449 kb on - strand, within GFF5644 at 19.449 kb on - strand, within GFF5644 at 19.449 kb on - strand, within GFF5644 at 19.449 kb on - strand, within GFF5644 at 19.592 kb on + strand, within GFF5644 at 19.592 kb on + strand, within GFF5644 at 19.593 kb on - strand, within GFF5644 at 19.593 kb on - strand, within GFF5644 at 19.593 kb on - strand, within GFF5644 at 19.599 kb on - strand, within GFF5644 at 19.599 kb on - strand, within GFF5644 at 19.599 kb on - strand, within GFF5644 at 19.599 kb on - strand, within GFF5644 at 19.599 kb on - strand, within GFF5644 at 19.613 kb on + strand, within GFF5644 at 19.613 kb on + strand, within GFF5644 at 19.730 kb on + strand, within GFF5644 at 19.730 kb on + strand, within GFF5644 at 19.730 kb on + strand, within GFF5644 at 19.730 kb on + strand, within GFF5644 at 19.730 kb on + strand, within GFF5644 at 19.731 kb on - strand, within GFF5644 at 19.731 kb on - strand, within GFF5644 at 19.731 kb on - strand, within GFF5644 at 19.731 kb on - strand, within GFF5644 at 20.003 kb on + strand, within GFF5644 at 20.004 kb on - strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.090 kb on + strand, within GFF5644 at 20.091 kb on - strand, within GFF5644 at 20.091 kb on - strand, within GFF5644 at 20.091 kb on - strand, within GFF5644 at 20.091 kb on - strand, within GFF5644 at 20.091 kb on - strand, within GFF5644
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 17,991 - -0.1 17,991 - -0.7 18,052 + -0.6 18,053 - -0.3 18,110 + -0.5 18,110 + -0.9 18,110 + -0.3 18,110 + -0.7 18,110 + -0.3 18,110 + -0.5 18,110 + +0.7 18,110 + +1.1 18,111 - -0.7 18,111 - -1.3 18,111 - -0.3 18,111 - +0.4 18,111 - +0.2 18,111 - -0.8 18,111 - +0.1 18,111 - +0.1 18,111 - +1.0 18,111 - -1.6 18,111 - -0.1 18,114 + -1.3 18,114 + -0.2 18,114 + +0.4 18,115 - -0.1 18,198 + +0.5 18,198 + -1.3 18,199 - -0.6 18,199 - -0.6 18,326 + +0.8 18,327 - -0.5 18,542 - GFF5643 0.12 -0.5 18,576 + GFF5643 0.16 +2.3 18,576 + GFF5643 0.16 +0.6 18,577 - GFF5643 0.16 +0.7 18,577 - GFF5643 0.16 +0.2 18,577 - GFF5643 0.16 -0.8 18,577 - GFF5643 0.16 -0.3 18,798 + GFF5643 0.46 +0.1 18,798 + GFF5643 0.46 +0.5 18,799 - GFF5643 0.46 +0.3 18,799 - GFF5643 0.46 -1.8 18,804 + GFF5643 0.46 -0.3 18,804 + GFF5643 0.46 -0.2 18,804 + GFF5643 0.46 +0.0 18,804 + GFF5643 0.46 -0.8 18,804 + GFF5643 0.46 +0.5 18,804 + GFF5643 0.46 -0.3 18,804 + GFF5643 0.46 -0.9 18,804 + GFF5643 0.46 +0.3 18,804 + GFF5643 0.46 -0.9 18,804 + GFF5643 0.46 -0.2 18,805 - GFF5643 0.47 -0.1 18,805 - GFF5643 0.47 +1.1 18,805 - GFF5643 0.47 -0.0 18,881 + GFF5643 0.57 -0.8 18,881 + GFF5643 0.57 +0.5 18,881 + GFF5643 0.57 +0.2 18,881 + GFF5643 0.57 +0.2 18,881 + GFF5643 0.57 -0.7 18,882 - GFF5643 0.57 -2.1 18,882 - GFF5643 0.57 -0.2 18,882 - GFF5643 0.57 +0.6 18,882 - GFF5643 0.57 +0.2 18,882 - GFF5643 0.57 +0.7 18,885 + GFF5643 0.57 -0.3 18,885 + GFF5643 0.57 +1.4 18,885 + GFF5643 0.57 +0.2 18,885 + GFF5643 0.57 +0.8 18,885 + GFF5643 0.57 +0.3 18,885 + GFF5643 0.57 -0.4 18,885 + GFF5643 0.57 +0.9 18,885 + GFF5643 0.57 +1.8 18,885 + GFF5643 0.57 -0.5 18,885 + GFF5643 0.57 -0.5 18,885 + GFF5643 0.57 -0.6 18,885 + GFF5643 0.57 -0.9 18,885 - GFF5643 0.57 -1.2 18,886 - GFF5643 0.57 -1.2 18,886 - GFF5643 0.57 -0.6 18,886 - GFF5643 0.57 +0.0 18,886 - GFF5643 0.57 +0.2 18,886 - GFF5643 0.57 -0.3 18,886 - GFF5643 0.57 -0.6 18,886 - GFF5643 0.57 +1.1 18,886 - GFF5643 0.57 +0.1 18,886 - GFF5643 0.57 -0.1 18,886 - GFF5643 0.57 -0.9 18,886 - GFF5643 0.57 -0.8 18,886 - GFF5643 0.57 -1.7 19,176 + -0.2 19,176 + -0.6 19,176 + -0.3 19,176 + +3.3 19,176 + -0.3 19,176 + +0.1 19,176 + -0.5 19,176 + +0.5 19,177 - +1.5 19,177 - -0.4 19,177 - -0.4 19,177 - -0.9 19,177 - +1.9 19,177 - +0.5 19,177 - +0.2 19,177 - -0.9 19,177 - +1.2 19,178 + -0.3 19,178 + +0.5 19,178 + +0.0 19,179 - -0.3 19,179 - +0.0 19,179 - +0.1 19,436 + GFF5644 0.11 +0.5 19,436 + GFF5644 0.11 +0.5 19,436 + GFF5644 0.11 -0.2 19,448 + GFF5644 0.12 +0.1 19,448 + GFF5644 0.12 +0.4 19,448 + GFF5644 0.12 -0.2 19,448 + GFF5644 0.12 -0.4 19,449 - GFF5644 0.12 +0.7 19,449 - GFF5644 0.12 -0.1 19,449 - GFF5644 0.12 -0.9 19,449 - GFF5644 0.12 -0.3 19,449 - GFF5644 0.12 -0.5 19,592 + GFF5644 0.26 -0.3 19,592 + GFF5644 0.26 -0.2 19,593 - GFF5644 0.26 +0.5 19,593 - GFF5644 0.26 +0.3 19,593 - GFF5644 0.26 -0.5 19,599 - GFF5644 0.27 -0.7 19,599 - GFF5644 0.27 -0.5 19,599 - GFF5644 0.27 +0.1 19,599 - GFF5644 0.27 -0.1 19,599 - GFF5644 0.27 -1.9 19,613 + GFF5644 0.28 +0.0 19,613 + GFF5644 0.28 -0.6 19,730 + GFF5644 0.39 +0.2 19,730 + GFF5644 0.39 -0.0 19,730 + GFF5644 0.39 -0.4 19,730 + GFF5644 0.39 +0.5 19,730 + GFF5644 0.39 -0.8 19,731 - GFF5644 0.39 -0.4 19,731 - GFF5644 0.39 +2.2 19,731 - GFF5644 0.39 -0.7 19,731 - GFF5644 0.39 -0.2 20,003 + GFF5644 0.65 +1.7 20,004 - GFF5644 0.65 -0.5 20,090 + GFF5644 0.74 +0.3 20,090 + GFF5644 0.74 -0.2 20,090 + GFF5644 0.74 -0.3 20,090 + GFF5644 0.74 -0.3 20,090 + GFF5644 0.74 +0.0 20,090 + GFF5644 0.74 +0.1 20,090 + GFF5644 0.74 -0.6 20,091 - GFF5644 0.74 -0.9 20,091 - GFF5644 0.74 +1.1 20,091 - GFF5644 0.74 -0.2 20,091 - GFF5644 0.74 +0.3 20,091 - GFF5644 0.74 +0.5
Or see this region's nucleotide sequence