Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4922 and GFF4923 are separated by 6 nucleotides GFF4923 and GFF4924 are separated by 40 nucleotides GFF4924 and GFF4925 overlap by 8 nucleotides GFF4925 and GFF4926 are separated by 69 nucleotides
GFF4922 - hypothetical protein, at 14,703 to 15,194
GFF4922
GFF4923 - Substrate-specific component BioY of biotin ECF transporter, at 15,201 to 15,791
GFF4923
GFF4924 - Transmembrane component BioN of energizing module of biotin ECF transporter, at 15,832 to 16,425
GFF4924
GFF4925 - ATPase component BioM of energizing module of biotin ECF transporter, at 16,418 to 17,137
GFF4925
GFF4926 - Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23), at 17,207 to 18,049
GFF4926
Position (kb) 15
16
17 Strain fitness (log2 ratio) -2
-1
0
1 at 14.874 kb on + strand, within GFF4922 at 14.874 kb on + strand, within GFF4922 at 14.874 kb on + strand, within GFF4922 at 14.875 kb on - strand, within GFF4922 at 14.875 kb on - strand, within GFF4922 at 14.934 kb on + strand, within GFF4922 at 14.934 kb on + strand, within GFF4922 at 14.934 kb on + strand, within GFF4922 at 14.934 kb on + strand, within GFF4922 at 14.934 kb on + strand, within GFF4922 at 14.935 kb on - strand, within GFF4922 at 14.935 kb on - strand, within GFF4922 at 14.935 kb on - strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.072 kb on + strand, within GFF4922 at 15.073 kb on - strand, within GFF4922 at 15.073 kb on - strand, within GFF4922 at 15.073 kb on - strand, within GFF4922 at 15.073 kb on - strand, within GFF4922 at 15.073 kb on - strand, within GFF4922 at 15.073 kb on - strand, within GFF4922 at 15.084 kb on + strand, within GFF4922 at 15.084 kb on + strand, within GFF4922 at 15.084 kb on + strand, within GFF4922 at 15.085 kb on - strand, within GFF4922 at 15.147 kb on + strand at 15.147 kb on + strand at 15.147 kb on + strand at 15.147 kb on + strand at 15.147 kb on + strand at 15.147 kb on + strand at 15.147 kb on + strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.148 kb on - strand at 15.370 kb on + strand, within GFF4923 at 15.370 kb on + strand, within GFF4923 at 15.370 kb on + strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.371 kb on - strand, within GFF4923 at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.748 kb on + strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.749 kb on - strand at 15.947 kb on + strand, within GFF4924 at 15.947 kb on + strand, within GFF4924 at 15.947 kb on + strand, within GFF4924 at 15.977 kb on + strand, within GFF4924 at 15.978 kb on - strand, within GFF4924 at 16.412 kb on + strand at 16.413 kb on - strand at 16.413 kb on - strand at 16.419 kb on + strand at 16.470 kb on + strand at 16.548 kb on + strand, within GFF4925 at 16.548 kb on + strand, within GFF4925 at 16.549 kb on - strand, within GFF4925 at 17.179 kb on - strand at 17.415 kb on + strand, within GFF4926 at 17.415 kb on + strand, within GFF4926 at 17.416 kb on - strand, within GFF4926 at 17.416 kb on - strand, within GFF4926
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 14,874 + GFF4922 0.35 +0.0 14,874 + GFF4922 0.35 +0.7 14,874 + GFF4922 0.35 -0.2 14,875 - GFF4922 0.35 -0.7 14,875 - GFF4922 0.35 -0.9 14,934 + GFF4922 0.47 -2.4 14,934 + GFF4922 0.47 +1.4 14,934 + GFF4922 0.47 -0.4 14,934 + GFF4922 0.47 +0.0 14,934 + GFF4922 0.47 -0.4 14,935 - GFF4922 0.47 -1.1 14,935 - GFF4922 0.47 +1.3 14,935 - GFF4922 0.47 -0.5 15,072 + GFF4922 0.75 -0.1 15,072 + GFF4922 0.75 +0.5 15,072 + GFF4922 0.75 -0.4 15,072 + GFF4922 0.75 -0.1 15,072 + GFF4922 0.75 +0.2 15,072 + GFF4922 0.75 +1.2 15,072 + GFF4922 0.75 -0.0 15,072 + GFF4922 0.75 -0.6 15,072 + GFF4922 0.75 +0.0 15,072 + GFF4922 0.75 +0.3 15,072 + GFF4922 0.75 +0.2 15,072 + GFF4922 0.75 -0.5 15,072 + GFF4922 0.75 -0.0 15,072 + GFF4922 0.75 +0.4 15,072 + GFF4922 0.75 -1.7 15,072 + GFF4922 0.75 +1.5 15,072 + GFF4922 0.75 +0.2 15,072 + GFF4922 0.75 +0.5 15,072 + GFF4922 0.75 -0.4 15,073 - GFF4922 0.75 -0.4 15,073 - GFF4922 0.75 -0.3 15,073 - GFF4922 0.75 -0.5 15,073 - GFF4922 0.75 +0.3 15,073 - GFF4922 0.75 -0.3 15,073 - GFF4922 0.75 -0.1 15,084 + GFF4922 0.77 +0.2 15,084 + GFF4922 0.77 -0.0 15,084 + GFF4922 0.77 -0.0 15,085 - GFF4922 0.78 -1.3 15,147 + +0.6 15,147 + -0.4 15,147 + +1.0 15,147 + -0.3 15,147 + +1.1 15,147 + -0.5 15,147 + -0.5 15,148 - -0.2 15,148 - -0.8 15,148 - -0.1 15,148 - -1.9 15,148 - +0.1 15,148 - +0.3 15,148 - +0.8 15,148 - -0.4 15,148 - -1.0 15,370 + GFF4923 0.29 +0.2 15,370 + GFF4923 0.29 -0.0 15,370 + GFF4923 0.29 -1.4 15,371 - GFF4923 0.29 -0.4 15,371 - GFF4923 0.29 -0.2 15,371 - GFF4923 0.29 +1.2 15,371 - GFF4923 0.29 +0.2 15,371 - GFF4923 0.29 -0.1 15,371 - GFF4923 0.29 -0.9 15,371 - GFF4923 0.29 -0.9 15,748 + +0.8 15,748 + +0.5 15,748 + -1.3 15,748 + +0.4 15,748 + +0.5 15,748 + -1.2 15,748 + -0.3 15,748 + -0.1 15,748 + -0.4 15,748 + +1.0 15,748 + -1.0 15,749 - +0.8 15,749 - -0.2 15,749 - +0.1 15,749 - -0.7 15,749 - -0.6 15,749 - -0.5 15,749 - -0.2 15,749 - -0.5 15,749 - -0.7 15,749 - -0.5 15,749 - -0.2 15,749 - +1.0 15,947 + GFF4924 0.19 +0.3 15,947 + GFF4924 0.19 +0.2 15,947 + GFF4924 0.19 +0.2 15,977 + GFF4924 0.24 +0.4 15,978 - GFF4924 0.25 -2.6 16,412 + -0.2 16,413 - -0.3 16,413 - +1.5 16,419 + +0.2 16,470 + +0.2 16,548 + GFF4925 0.18 -0.5 16,548 + GFF4925 0.18 +0.6 16,549 - GFF4925 0.18 -0.5 17,179 - -0.2 17,415 + GFF4926 0.25 -0.1 17,415 + GFF4926 0.25 +1.2 17,416 - GFF4926 0.25 +0.2 17,416 - GFF4926 0.25 -0.6
Or see this region's nucleotide sequence