Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4044 and GFF4045 are separated by 118 nucleotides GFF4045 and GFF4046 are separated by 66 nucleotides
GFF4044 - hypothetical protein, at 255,910 to 256,335
GFF4044
GFF4045 - no description, at 256,454 to 256,873
GFF4045
GFF4046 - Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA, at 256,940 to 260,188
GFF4046
Position (kb) 256
257 Strain fitness (log2 ratio) -2
-1
0
1
2 at 255.510 kb on + strand at 255.510 kb on + strand at 255.511 kb on - strand at 255.544 kb on - strand at 255.636 kb on - strand at 255.722 kb on + strand at 255.723 kb on - strand at 255.727 kb on - strand at 255.747 kb on - strand at 255.747 kb on - strand at 255.846 kb on + strand at 256.260 kb on + strand, within GFF4044 at 256.364 kb on + strand at 256.365 kb on - strand at 256.421 kb on + strand at 256.421 kb on + strand at 256.422 kb on - strand at 256.422 kb on - strand at 256.433 kb on + strand at 256.433 kb on + strand at 256.575 kb on - strand, within GFF4045 at 256.611 kb on - strand, within GFF4045 at 256.611 kb on - strand, within GFF4045 at 256.611 kb on - strand, within GFF4045 at 256.668 kb on + strand, within GFF4045 at 256.668 kb on + strand, within GFF4045 at 256.669 kb on - strand, within GFF4045 at 256.704 kb on + strand, within GFF4045 at 256.705 kb on - strand, within GFF4045 at 256.887 kb on + strand at 256.888 kb on - strand at 256.941 kb on + strand at 257.627 kb on + strand, within GFF4046
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 255,510 + +1.2 255,510 + +0.0 255,511 - -0.1 255,544 - -0.1 255,636 - -1.2 255,722 + -0.7 255,723 - -0.9 255,727 - +0.3 255,747 - +0.3 255,747 - +1.9 255,846 + -0.7 256,260 + GFF4044 0.82 +0.0 256,364 + +0.2 256,365 - -2.4 256,421 + -0.5 256,421 + -0.2 256,422 - -0.3 256,422 - -0.3 256,433 + -1.2 256,433 + +0.6 256,575 - GFF4045 0.29 -0.6 256,611 - GFF4045 0.37 -0.2 256,611 - GFF4045 0.37 -0.8 256,611 - GFF4045 0.37 -0.1 256,668 + GFF4045 0.51 +0.1 256,668 + GFF4045 0.51 -1.9 256,669 - GFF4045 0.51 -0.4 256,704 + GFF4045 0.60 -0.7 256,705 - GFF4045 0.60 -0.7 256,887 + -0.6 256,888 - -0.1 256,941 + +0.0 257,627 + GFF4046 0.21 -1.0
Or see this region's nucleotide sequence