Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1270 and GFF1271 are separated by 95 nucleotides GFF1271 and GFF1272 overlap by 38 nucleotides GFF1272 and GFF1273 are separated by 719 nucleotides
GFF1270 - Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA, at 586,128 to 601,286
GFF1270
GFF1271 - no description, at 601,382 to 602,296
GFF1271
GFF1272 - no description, at 602,259 to 603,113
GFF1272
GFF1273 - no description, at 603,833 to 604,066
GFF1273
Position (kb) 602
603
604 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 601.285 kb on - strand at 601.323 kb on + strand at 601.323 kb on + strand at 601.323 kb on + strand at 601.323 kb on + strand at 601.323 kb on + strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.324 kb on - strand at 601.614 kb on + strand, within GFF1271 at 601.614 kb on + strand, within GFF1271 at 601.614 kb on + strand, within GFF1271 at 601.614 kb on + strand, within GFF1271 at 601.614 kb on + strand, within GFF1271 at 601.615 kb on - strand, within GFF1271 at 601.615 kb on - strand, within GFF1271 at 601.615 kb on - strand, within GFF1271 at 601.615 kb on - strand, within GFF1271 at 601.615 kb on - strand, within GFF1271 at 601.768 kb on + strand, within GFF1271 at 601.768 kb on + strand, within GFF1271 at 601.768 kb on + strand, within GFF1271 at 601.769 kb on - strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.872 kb on + strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.873 kb on - strand, within GFF1271 at 601.921 kb on + strand, within GFF1271 at 601.922 kb on - strand, within GFF1271 at 601.922 kb on - strand, within GFF1271 at 601.922 kb on - strand, within GFF1271 at 601.922 kb on - strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.939 kb on + strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.940 kb on - strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.958 kb on + strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 601.959 kb on - strand, within GFF1271 at 602.027 kb on - strand, within GFF1271 at 602.086 kb on + strand, within GFF1271 at 602.086 kb on + strand, within GFF1271 at 602.086 kb on + strand, within GFF1271 at 602.086 kb on + strand, within GFF1271 at 602.086 kb on + strand, within GFF1271 at 602.086 kb on + strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.087 kb on - strand, within GFF1271 at 602.149 kb on + strand, within GFF1271 at 602.149 kb on + strand, within GFF1271 at 602.149 kb on + strand, within GFF1271 at 602.149 kb on + strand, within GFF1271 at 602.149 kb on + strand, within GFF1271 at 602.150 kb on - strand, within GFF1271 at 602.150 kb on - strand, within GFF1271 at 602.150 kb on - strand, within GFF1271 at 602.150 kb on - strand, within GFF1271 at 602.161 kb on + strand, within GFF1271 at 602.199 kb on + strand, within GFF1271 at 602.199 kb on + strand, within GFF1271 at 602.199 kb on + strand, within GFF1271 at 602.200 kb on - strand, within GFF1271 at 602.200 kb on - strand, within GFF1271 at 602.200 kb on - strand, within GFF1271 at 602.200 kb on - strand, within GFF1271 at 602.203 kb on + strand, within GFF1271 at 602.324 kb on + strand at 602.339 kb on + strand at 602.340 kb on - strand at 602.429 kb on - strand, within GFF1272 at 602.429 kb on - strand, within GFF1272 at 602.429 kb on - strand, within GFF1272 at 602.456 kb on + strand, within GFF1272 at 602.573 kb on - strand, within GFF1272 at 602.585 kb on - strand, within GFF1272 at 602.604 kb on - strand, within GFF1272 at 602.607 kb on + strand, within GFF1272 at 602.662 kb on - strand, within GFF1272 at 602.662 kb on - strand, within GFF1272 at 602.716 kb on - strand, within GFF1272 at 602.798 kb on + strand, within GFF1272 at 602.882 kb on - strand, within GFF1272 at 602.923 kb on - strand, within GFF1272 at 602.934 kb on + strand, within GFF1272 at 602.935 kb on - strand, within GFF1272 at 602.936 kb on + strand, within GFF1272 at 602.936 kb on + strand, within GFF1272 at 602.960 kb on + strand, within GFF1272 at 602.961 kb on - strand, within GFF1272 at 603.009 kb on - strand, within GFF1272 at 603.037 kb on + strand at 603.038 kb on - strand at 603.040 kb on + strand at 603.043 kb on + strand at 603.184 kb on - strand at 603.186 kb on - strand at 603.320 kb on + strand at 603.321 kb on - strand at 603.321 kb on - strand at 603.366 kb on + strand at 603.376 kb on - strand at 603.377 kb on - strand at 603.410 kb on + strand at 603.452 kb on + strand at 603.478 kb on - strand at 603.478 kb on - strand at 603.482 kb on + strand at 603.482 kb on + strand at 603.482 kb on + strand at 603.482 kb on + strand at 603.482 kb on + strand at 603.483 kb on - strand at 603.483 kb on - strand at 603.483 kb on - strand at 603.483 kb on - strand at 603.508 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.645 kb on + strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.646 kb on - strand at 603.663 kb on + strand at 603.663 kb on + strand at 603.663 kb on + strand at 603.663 kb on + strand at 603.663 kb on + strand at 603.663 kb on + strand at 603.664 kb on - strand at 603.664 kb on - strand at 603.664 kb on - strand at 603.699 kb on + strand at 603.699 kb on + strand at 603.699 kb on + strand at 603.700 kb on - strand at 603.700 kb on - strand at 603.700 kb on - strand at 603.750 kb on - strand at 603.750 kb on - strand at 603.750 kb on - strand at 603.750 kb on - strand at 603.750 kb on - strand at 603.815 kb on + strand at 603.815 kb on + strand at 603.815 kb on + strand at 603.815 kb on + strand at 603.816 kb on - strand at 603.816 kb on - strand at 603.816 kb on - strand at 603.816 kb on - strand at 603.816 kb on - strand at 603.875 kb on + strand, within GFF1273 at 603.875 kb on + strand, within GFF1273 at 603.876 kb on - strand, within GFF1273 at 603.876 kb on - strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.954 kb on + strand, within GFF1273 at 603.955 kb on - strand, within GFF1273 at 603.955 kb on - strand, within GFF1273 at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.069 kb on + strand at 604.070 kb on - strand at 604.070 kb on - strand at 604.070 kb on - strand at 604.070 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 601,285 - -0.2 601,323 + +0.1 601,323 + -0.0 601,323 + -0.1 601,323 + +0.1 601,323 + +0.1 601,324 - -0.6 601,324 - -0.5 601,324 - -0.1 601,324 - +0.7 601,324 - -0.2 601,324 - -1.2 601,324 - -0.8 601,324 - +0.0 601,324 - -0.4 601,324 - -0.4 601,324 - -1.1 601,614 + GFF1271 0.25 -0.3 601,614 + GFF1271 0.25 +0.3 601,614 + GFF1271 0.25 +0.2 601,614 + GFF1271 0.25 +0.7 601,614 + GFF1271 0.25 -0.1 601,615 - GFF1271 0.25 -0.4 601,615 - GFF1271 0.25 -0.2 601,615 - GFF1271 0.25 +0.1 601,615 - GFF1271 0.25 +0.4 601,615 - GFF1271 0.25 -0.8 601,768 + GFF1271 0.42 -0.4 601,768 + GFF1271 0.42 +0.1 601,768 + GFF1271 0.42 -0.6 601,769 - GFF1271 0.42 -0.5 601,872 + GFF1271 0.54 -0.1 601,872 + GFF1271 0.54 -0.6 601,872 + GFF1271 0.54 +0.7 601,872 + GFF1271 0.54 -1.2 601,872 + GFF1271 0.54 +0.4 601,872 + GFF1271 0.54 +0.4 601,872 + GFF1271 0.54 -1.4 601,872 + GFF1271 0.54 -0.3 601,873 - GFF1271 0.54 -0.2 601,873 - GFF1271 0.54 -0.8 601,873 - GFF1271 0.54 -0.3 601,873 - GFF1271 0.54 -0.0 601,873 - GFF1271 0.54 -0.4 601,873 - GFF1271 0.54 -0.7 601,873 - GFF1271 0.54 +0.1 601,873 - GFF1271 0.54 +1.0 601,921 + GFF1271 0.59 +0.1 601,922 - GFF1271 0.59 -0.1 601,922 - GFF1271 0.59 -0.7 601,922 - GFF1271 0.59 +0.2 601,922 - GFF1271 0.59 +0.4 601,939 + GFF1271 0.61 +0.5 601,939 + GFF1271 0.61 +0.0 601,939 + GFF1271 0.61 +0.1 601,939 + GFF1271 0.61 -0.6 601,939 + GFF1271 0.61 +1.1 601,939 + GFF1271 0.61 +0.8 601,939 + GFF1271 0.61 -0.3 601,939 + GFF1271 0.61 -0.9 601,940 - GFF1271 0.61 -0.1 601,940 - GFF1271 0.61 -0.9 601,940 - GFF1271 0.61 +0.2 601,940 - GFF1271 0.61 -0.6 601,940 - GFF1271 0.61 -1.6 601,940 - GFF1271 0.61 +1.1 601,940 - GFF1271 0.61 +0.3 601,940 - GFF1271 0.61 -0.3 601,940 - GFF1271 0.61 -1.1 601,958 + GFF1271 0.63 -0.2 601,958 + GFF1271 0.63 -0.3 601,958 + GFF1271 0.63 +0.2 601,958 + GFF1271 0.63 +0.6 601,958 + GFF1271 0.63 -0.5 601,958 + GFF1271 0.63 +0.1 601,958 + GFF1271 0.63 -0.7 601,958 + GFF1271 0.63 +0.8 601,958 + GFF1271 0.63 +0.4 601,958 + GFF1271 0.63 -0.3 601,958 + GFF1271 0.63 -0.8 601,958 + GFF1271 0.63 -0.9 601,958 + GFF1271 0.63 -0.9 601,959 - GFF1271 0.63 -0.7 601,959 - GFF1271 0.63 -0.4 601,959 - GFF1271 0.63 -0.2 601,959 - GFF1271 0.63 -1.3 601,959 - GFF1271 0.63 -0.9 601,959 - GFF1271 0.63 -1.1 601,959 - GFF1271 0.63 -0.4 601,959 - GFF1271 0.63 -1.9 601,959 - GFF1271 0.63 +1.0 601,959 - GFF1271 0.63 +0.2 601,959 - GFF1271 0.63 -0.0 601,959 - GFF1271 0.63 +1.1 601,959 - GFF1271 0.63 -0.1 601,959 - GFF1271 0.63 -0.7 601,959 - GFF1271 0.63 -1.1 601,959 - GFF1271 0.63 -1.1 601,959 - GFF1271 0.63 -1.8 601,959 - GFF1271 0.63 -1.6 601,959 - GFF1271 0.63 +1.1 601,959 - GFF1271 0.63 -0.0 601,959 - GFF1271 0.63 -0.3 602,027 - GFF1271 0.70 -0.8 602,086 + GFF1271 0.77 +0.6 602,086 + GFF1271 0.77 -1.0 602,086 + GFF1271 0.77 -2.8 602,086 + GFF1271 0.77 +0.3 602,086 + GFF1271 0.77 -1.5 602,086 + GFF1271 0.77 +0.7 602,087 - GFF1271 0.77 +0.1 602,087 - GFF1271 0.77 +0.0 602,087 - GFF1271 0.77 +0.2 602,087 - GFF1271 0.77 +0.7 602,087 - GFF1271 0.77 +0.1 602,087 - GFF1271 0.77 -0.2 602,087 - GFF1271 0.77 -0.5 602,149 + GFF1271 0.84 -0.1 602,149 + GFF1271 0.84 +0.7 602,149 + GFF1271 0.84 -0.2 602,149 + GFF1271 0.84 +1.0 602,149 + GFF1271 0.84 -1.4 602,150 - GFF1271 0.84 -0.3 602,150 - GFF1271 0.84 -0.3 602,150 - GFF1271 0.84 +0.7 602,150 - GFF1271 0.84 -0.8 602,161 + GFF1271 0.85 -0.2 602,199 + GFF1271 0.89 -0.2 602,199 + GFF1271 0.89 -0.4 602,199 + GFF1271 0.89 -0.5 602,200 - GFF1271 0.89 +0.1 602,200 - GFF1271 0.89 -0.1 602,200 - GFF1271 0.89 -1.2 602,200 - GFF1271 0.89 -0.1 602,203 + GFF1271 0.90 -1.8 602,324 + +0.6 602,339 + -0.7 602,340 - +0.1 602,429 - GFF1272 0.20 -0.4 602,429 - GFF1272 0.20 -0.7 602,429 - GFF1272 0.20 -0.9 602,456 + GFF1272 0.23 -1.1 602,573 - GFF1272 0.37 -0.7 602,585 - GFF1272 0.38 +0.3 602,604 - GFF1272 0.40 -0.6 602,607 + GFF1272 0.41 -0.3 602,662 - GFF1272 0.47 -0.5 602,662 - GFF1272 0.47 -0.6 602,716 - GFF1272 0.53 +0.8 602,798 + GFF1272 0.63 -0.5 602,882 - GFF1272 0.73 -0.5 602,923 - GFF1272 0.78 -0.6 602,934 + GFF1272 0.79 -0.0 602,935 - GFF1272 0.79 -1.1 602,936 + GFF1272 0.79 -0.1 602,936 + GFF1272 0.79 -0.5 602,960 + GFF1272 0.82 -1.1 602,961 - GFF1272 0.82 -0.2 603,009 - GFF1272 0.88 -0.8 603,037 + -0.4 603,038 - +1.4 603,040 + +0.1 603,043 + -0.3 603,184 - -1.1 603,186 - -0.2 603,320 + +0.4 603,321 - -0.4 603,321 - -0.9 603,366 + +1.2 603,376 - -0.2 603,377 - -0.6 603,410 + -0.2 603,452 + -0.4 603,478 - -0.9 603,478 - -0.3 603,482 + -2.9 603,482 + -0.7 603,482 + +0.0 603,482 + +0.7 603,482 + -0.8 603,483 - -0.4 603,483 - +0.9 603,483 - -0.0 603,483 - -0.7 603,508 + +0.2 603,645 + +0.1 603,645 + -0.3 603,645 + +1.4 603,645 + +0.4 603,645 + -0.5 603,645 + +0.3 603,645 + +1.4 603,645 + -0.8 603,645 + -0.9 603,645 + +0.5 603,645 + +0.2 603,645 + +0.2 603,645 + +0.7 603,645 + -0.7 603,646 - +0.2 603,646 - -0.0 603,646 - +0.3 603,646 - -0.2 603,646 - -0.2 603,646 - -0.9 603,646 - -1.8 603,646 - -0.6 603,646 - -0.7 603,646 - +0.8 603,663 + -0.8 603,663 + +0.7 603,663 + +1.4 603,663 + -0.6 603,663 + -0.4 603,663 + -0.3 603,664 - +0.6 603,664 - -0.9 603,664 - -0.6 603,699 + -0.9 603,699 + +1.1 603,699 + +0.4 603,700 - +1.0 603,700 - +0.4 603,700 - -0.2 603,750 - -1.2 603,750 - +0.2 603,750 - -0.4 603,750 - -1.4 603,750 - -0.9 603,815 + -0.4 603,815 + -0.2 603,815 + +0.2 603,815 + -0.4 603,816 - +0.2 603,816 - +0.1 603,816 - -0.2 603,816 - -0.8 603,816 - -0.2 603,875 + GFF1273 0.18 +0.2 603,875 + GFF1273 0.18 +0.1 603,876 - GFF1273 0.18 +0.1 603,876 - GFF1273 0.18 -0.5 603,954 + GFF1273 0.52 +0.3 603,954 + GFF1273 0.52 +0.3 603,954 + GFF1273 0.52 +0.1 603,954 + GFF1273 0.52 -0.6 603,954 + GFF1273 0.52 +0.4 603,954 + GFF1273 0.52 -1.2 603,954 + GFF1273 0.52 -1.4 603,954 + GFF1273 0.52 +1.0 603,955 - GFF1273 0.52 +0.6 603,955 - GFF1273 0.52 -0.2 604,069 + +1.7 604,069 + +0.1 604,069 + +0.4 604,069 + -0.6 604,069 + +0.6 604,069 + -0.0 604,069 + +0.2 604,069 + +0.1 604,069 + +0.1 604,069 + -0.4 604,070 - +0.6 604,070 - -1.2 604,070 - +0.5 604,070 - +0.6
Or see this region's nucleotide sequence