Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6929 and GFF6930 are separated by 2 nucleotides GFF6930 and GFF6931 are separated by 428 nucleotides GFF6931 and GFF6932 are separated by 42 nucleotides GFF6932 and GFF6933 are separated by 31 nucleotides
GFF6929 - GENE II AND X PROTEINS, at 7,503 to 7,925
GFF6929
GFF6930 - no description, at 7,928 to 8,383
GFF6930
GFF6931 - no description, at 8,812 to 9,273
GFF6931
GFF6932 - no description, at 9,316 to 9,939
GFF6932
GFF6933 - no description, at 9,971 to 10,192
GFF6933
Position (kb) 8
9
10 Strain fitness (log2 ratio) -2
-1
0
1 at 8.134 kb on - strand, within GFF6930 at 8.239 kb on - strand, within GFF6930 at 8.821 kb on + strand at 8.960 kb on + strand, within GFF6931 at 8.960 kb on + strand, within GFF6931 at 8.961 kb on - strand, within GFF6931 at 8.961 kb on - strand, within GFF6931 at 9.146 kb on + strand, within GFF6931 at 9.147 kb on - strand, within GFF6931 at 9.391 kb on + strand, within GFF6932 at 9.391 kb on + strand, within GFF6932 at 9.391 kb on + strand, within GFF6932 at 9.392 kb on - strand, within GFF6932 at 9.644 kb on + strand, within GFF6932
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 8,134 - GFF6930 0.45 +1.4 8,239 - GFF6930 0.68 -0.8 8,821 + -0.7 8,960 + GFF6931 0.32 -1.8 8,960 + GFF6931 0.32 -0.8 8,961 - GFF6931 0.32 +0.1 8,961 - GFF6931 0.32 -0.9 9,146 + GFF6931 0.72 -0.1 9,147 - GFF6931 0.73 -0.6 9,391 + GFF6932 0.12 -1.1 9,391 + GFF6932 0.12 +0.6 9,391 + GFF6932 0.12 -0.1 9,392 - GFF6932 0.12 -0.1 9,644 + GFF6932 0.53 -0.6
Or see this region's nucleotide sequence