Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6736 and GFF6737 are separated by 212 nucleotides GFF6737 and GFF6738 overlap by 4 nucleotides
GFF6736 - Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter, at 47,669 to 49,354
GFF6736
GFF6737 - Uncharacterized aldehyde oxidase, 2Fe-2S subunit, at 49,567 to 50,070
GFF6737
GFF6738 - Uncharacterized aldehyde oxidase, molybdopterin-binding subunit, at 50,067 to 52,316
GFF6738
Position (kb) 49
50
51 Strain fitness (log2 ratio) -1
0
1 at 49.179 kb on + strand, within GFF6736 at 49.179 kb on + strand, within GFF6736 at 49.179 kb on + strand, within GFF6736 at 49.245 kb on + strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.246 kb on - strand at 49.520 kb on - strand at 49.575 kb on + strand at 49.576 kb on - strand at 49.576 kb on - strand at 49.576 kb on - strand at 49.582 kb on - strand at 49.902 kb on - strand, within GFF6737 at 49.902 kb on - strand, within GFF6737 at 49.935 kb on - strand, within GFF6737 at 49.971 kb on + strand, within GFF6737 at 49.971 kb on + strand, within GFF6737 at 49.972 kb on - strand, within GFF6737 at 49.975 kb on + strand, within GFF6737 at 49.975 kb on + strand, within GFF6737 at 49.975 kb on + strand, within GFF6737 at 49.976 kb on - strand, within GFF6737 at 50.310 kb on + strand, within GFF6738 at 50.310 kb on + strand, within GFF6738 at 50.310 kb on + strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.311 kb on - strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.460 kb on + strand, within GFF6738 at 50.461 kb on - strand, within GFF6738
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 49,179 + GFF6736 0.90 -1.1 49,179 + GFF6736 0.90 -0.0 49,179 + GFF6736 0.90 +0.4 49,245 + -0.3 49,246 - -0.3 49,246 - +0.2 49,246 - -0.2 49,246 - -0.5 49,246 - +0.6 49,520 - +0.6 49,575 + -0.4 49,576 - +0.3 49,576 - -0.0 49,576 - +0.9 49,582 - -1.3 49,902 - GFF6737 0.66 +0.3 49,902 - GFF6737 0.66 +0.6 49,935 - GFF6737 0.73 +0.7 49,971 + GFF6737 0.80 +1.0 49,971 + GFF6737 0.80 +0.6 49,972 - GFF6737 0.80 +0.3 49,975 + GFF6737 0.81 +0.7 49,975 + GFF6737 0.81 -0.0 49,975 + GFF6737 0.81 +0.7 49,976 - GFF6737 0.81 -0.1 50,310 + GFF6738 0.11 -0.3 50,310 + GFF6738 0.11 -1.4 50,310 + GFF6738 0.11 -0.4 50,311 - GFF6738 0.11 -0.0 50,311 - GFF6738 0.11 -0.6 50,311 - GFF6738 0.11 -1.2 50,311 - GFF6738 0.11 -1.2 50,460 + GFF6738 0.17 +0.3 50,460 + GFF6738 0.17 -0.3 50,460 + GFF6738 0.17 +0.3 50,460 + GFF6738 0.17 -0.3 50,461 - GFF6738 0.18 +0.7
Or see this region's nucleotide sequence