Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13615 and A4249_RS13620 are separated by 57 nucleotides A4249_RS13620 and A4249_RS13625 are separated by 52 nucleotides A4249_RS13625 and A4249_RS13630 overlap by 38 nucleotides A4249_RS13630 and A4249_RS13635 are separated by 290 nucleotides
A4249_RS13615: A4249_RS13615 - Rrf2 family transcriptional regulator, at 2,752,325 to 2,752,804
_RS13615
A4249_RS13620: A4249_RS13620 - dienelactone hydrolase family protein, at 2,752,862 to 2,753,611
_RS13620
A4249_RS13625: A4249_RS13625 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 2,753,664 to 2,754,302
_RS13625
A4249_RS13630: A4249_RS13630 - hypothetical protein, at 2,754,265 to 2,754,633
_RS13630
A4249_RS13635: A4249_RS13635 - molecular chaperone DnaK, at 2,754,924 to 2,756,831
_RS13635
Position (kb)
2753
2754
2755 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2753.047 kb on + strand, within A4249_RS13620 at 2753.143 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.145 kb on + strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.146 kb on - strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.151 kb on + strand, within A4249_RS13620 at 2753.152 kb on - strand, within A4249_RS13620 at 2753.152 kb on - strand, within A4249_RS13620 at 2753.152 kb on - strand, within A4249_RS13620 at 2753.152 kb on - strand, within A4249_RS13620 at 2753.358 kb on + strand, within A4249_RS13620 at 2753.358 kb on + strand, within A4249_RS13620 at 2753.358 kb on + strand, within A4249_RS13620 at 2753.358 kb on + strand, within A4249_RS13620 at 2753.478 kb on + strand, within A4249_RS13620 at 2753.620 kb on + strand at 2753.621 kb on - strand at 2753.786 kb on + strand, within A4249_RS13625 at 2753.786 kb on + strand, within A4249_RS13625 at 2753.787 kb on - strand, within A4249_RS13625 at 2753.787 kb on - strand, within A4249_RS13625 at 2753.941 kb on + strand, within A4249_RS13625 at 2753.941 kb on + strand, within A4249_RS13625 at 2754.061 kb on + strand, within A4249_RS13625 at 2754.061 kb on + strand, within A4249_RS13625 at 2754.062 kb on - strand, within A4249_RS13625 at 2754.154 kb on + strand, within A4249_RS13625 at 2754.273 kb on + strand at 2754.274 kb on - strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.275 kb on + strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.276 kb on - strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.281 kb on + strand at 2754.282 kb on - strand at 2754.282 kb on - strand at 2754.356 kb on + strand, within A4249_RS13630 at 2754.356 kb on + strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.357 kb on - strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.360 kb on + strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.361 kb on - strand, within A4249_RS13630 at 2754.470 kb on + strand, within A4249_RS13630 at 2754.470 kb on + strand, within A4249_RS13630 at 2754.471 kb on - strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.524 kb on + strand, within A4249_RS13630 at 2754.685 kb on + strand at 2754.685 kb on + strand at 2754.686 kb on - strand at 2754.686 kb on - strand at 2754.686 kb on - strand at 2754.750 kb on + strand at 2754.782 kb on + strand at 2754.782 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,753,047 + A4249_RS13620 0.25 -0.1 2,753,143 + A4249_RS13620 0.37 +0.3 2,753,145 + A4249_RS13620 0.38 +0.3 2,753,145 + A4249_RS13620 0.38 +1.8 2,753,145 + A4249_RS13620 0.38 -0.3 2,753,145 + A4249_RS13620 0.38 -2.6 2,753,145 + A4249_RS13620 0.38 +0.5 2,753,145 + A4249_RS13620 0.38 -2.0 2,753,145 + A4249_RS13620 0.38 -0.0 2,753,145 + A4249_RS13620 0.38 +1.0 2,753,145 + A4249_RS13620 0.38 -0.2 2,753,145 + A4249_RS13620 0.38 +0.4 2,753,146 - A4249_RS13620 0.38 +0.5 2,753,146 - A4249_RS13620 0.38 -1.5 2,753,146 - A4249_RS13620 0.38 +0.6 2,753,146 - A4249_RS13620 0.38 +0.2 2,753,146 - A4249_RS13620 0.38 -0.1 2,753,146 - A4249_RS13620 0.38 +0.1 2,753,146 - A4249_RS13620 0.38 -0.6 2,753,151 + A4249_RS13620 0.39 -1.3 2,753,151 + A4249_RS13620 0.39 -0.2 2,753,151 + A4249_RS13620 0.39 -1.0 2,753,151 + A4249_RS13620 0.39 +0.4 2,753,151 + A4249_RS13620 0.39 +0.3 2,753,151 + A4249_RS13620 0.39 -1.1 2,753,151 + A4249_RS13620 0.39 -0.2 2,753,151 + A4249_RS13620 0.39 -0.1 2,753,151 + A4249_RS13620 0.39 -1.3 2,753,152 - A4249_RS13620 0.39 -0.2 2,753,152 - A4249_RS13620 0.39 +0.5 2,753,152 - A4249_RS13620 0.39 -1.6 2,753,152 - A4249_RS13620 0.39 +0.5 2,753,358 + A4249_RS13620 0.66 -0.6 2,753,358 + A4249_RS13620 0.66 +0.8 2,753,358 + A4249_RS13620 0.66 -0.4 2,753,358 + A4249_RS13620 0.66 +0.7 2,753,478 + A4249_RS13620 0.82 +0.3 2,753,620 + -0.3 2,753,621 - -1.0 2,753,786 + A4249_RS13625 0.19 -0.8 2,753,786 + A4249_RS13625 0.19 -0.2 2,753,787 - A4249_RS13625 0.19 -0.1 2,753,787 - A4249_RS13625 0.19 +0.7 2,753,941 + A4249_RS13625 0.43 -2.1 2,753,941 + A4249_RS13625 0.43 -0.5 2,754,061 + A4249_RS13625 0.62 +0.3 2,754,061 + A4249_RS13625 0.62 -0.2 2,754,062 - A4249_RS13625 0.62 +0.9 2,754,154 + A4249_RS13625 0.77 +0.1 2,754,273 + -0.2 2,754,274 - -0.9 2,754,275 + +0.1 2,754,275 + -1.5 2,754,275 + -0.3 2,754,275 + -1.0 2,754,275 + +0.1 2,754,275 + +0.7 2,754,275 + +0.1 2,754,275 + -0.0 2,754,275 + +0.5 2,754,275 + -0.2 2,754,275 + +0.1 2,754,275 + -0.2 2,754,275 + -0.4 2,754,276 - -0.4 2,754,276 - -0.0 2,754,276 - +0.2 2,754,276 - -0.3 2,754,276 - +0.4 2,754,276 - +0.7 2,754,276 - -1.2 2,754,276 - +0.1 2,754,276 - +1.0 2,754,276 - -0.3 2,754,276 - -0.5 2,754,276 - +0.7 2,754,281 + +1.1 2,754,281 + -0.2 2,754,281 + -0.5 2,754,281 + +0.7 2,754,281 + -1.2 2,754,281 + -0.3 2,754,281 + +0.6 2,754,281 + -0.2 2,754,282 - -0.2 2,754,282 - +0.0 2,754,356 + A4249_RS13630 0.25 -0.8 2,754,356 + A4249_RS13630 0.25 +0.1 2,754,357 - A4249_RS13630 0.25 -0.5 2,754,357 - A4249_RS13630 0.25 -0.4 2,754,357 - A4249_RS13630 0.25 +0.5 2,754,357 - A4249_RS13630 0.25 -0.2 2,754,360 + A4249_RS13630 0.26 +0.8 2,754,360 + A4249_RS13630 0.26 +0.6 2,754,360 + A4249_RS13630 0.26 -0.2 2,754,360 + A4249_RS13630 0.26 +0.4 2,754,360 + A4249_RS13630 0.26 -0.6 2,754,360 + A4249_RS13630 0.26 -0.2 2,754,360 + A4249_RS13630 0.26 -1.2 2,754,360 + A4249_RS13630 0.26 -1.1 2,754,360 + A4249_RS13630 0.26 +0.0 2,754,360 + A4249_RS13630 0.26 +0.1 2,754,360 + A4249_RS13630 0.26 +0.4 2,754,360 + A4249_RS13630 0.26 -0.1 2,754,361 - A4249_RS13630 0.26 -0.4 2,754,361 - A4249_RS13630 0.26 +0.0 2,754,361 - A4249_RS13630 0.26 -1.0 2,754,361 - A4249_RS13630 0.26 -0.1 2,754,361 - A4249_RS13630 0.26 -0.2 2,754,361 - A4249_RS13630 0.26 +1.8 2,754,361 - A4249_RS13630 0.26 -0.1 2,754,470 + A4249_RS13630 0.56 -2.2 2,754,470 + A4249_RS13630 0.56 -0.6 2,754,471 - A4249_RS13630 0.56 +0.4 2,754,524 + A4249_RS13630 0.70 -0.6 2,754,524 + A4249_RS13630 0.70 +0.4 2,754,524 + A4249_RS13630 0.70 -0.8 2,754,524 + A4249_RS13630 0.70 -0.0 2,754,685 + -1.1 2,754,685 + +0.8 2,754,686 - -0.3 2,754,686 - -1.1 2,754,686 - +1.1 2,754,750 + -0.8 2,754,782 + +1.0 2,754,782 + -0.7
Or see this region's nucleotide sequence