Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13300 and A4249_RS13305 overlap by 4 nucleotides A4249_RS13305 and A4249_RS13310 are separated by 12 nucleotides A4249_RS13310 and A4249_RS13315 overlap by 4 nucleotides
A4249_RS13300: A4249_RS13300 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 2,685,748 to 2,686,620
_RS13300
A4249_RS13305: A4249_RS13305 - YraN family protein, at 2,686,617 to 2,687,027
_RS13305
A4249_RS13310: A4249_RS13310 - transglutaminase family protein, at 2,687,040 to 2,687,855
_RS13310
A4249_RS13315: A4249_RS13315 - UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase, at 2,687,852 to 2,689,108
_RS13315
Position (kb)
2687
2688 Strain fitness (log2 ratio)
-2
-1
0
1 at 2686.369 kb on + strand, within A4249_RS13300 at 2686.370 kb on - strand, within A4249_RS13300 at 2686.553 kb on + strand at 2686.554 kb on - strand at 2686.554 kb on - strand at 2686.627 kb on + strand at 2686.627 kb on + strand at 2686.627 kb on + strand at 2686.628 kb on - strand at 2686.628 kb on - strand at 2686.628 kb on - strand at 2686.628 kb on - strand at 2686.890 kb on + strand, within A4249_RS13305 at 2686.891 kb on - strand, within A4249_RS13305 at 2686.954 kb on - strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.967 kb on + strand, within A4249_RS13305 at 2686.968 kb on - strand, within A4249_RS13305 at 2687.289 kb on + strand, within A4249_RS13310 at 2687.289 kb on + strand, within A4249_RS13310 at 2687.367 kb on + strand, within A4249_RS13310 at 2687.367 kb on + strand, within A4249_RS13310 at 2687.367 kb on + strand, within A4249_RS13310 at 2687.367 kb on + strand, within A4249_RS13310 at 2687.368 kb on - strand, within A4249_RS13310 at 2687.368 kb on - strand, within A4249_RS13310 at 2687.368 kb on - strand, within A4249_RS13310 at 2687.649 kb on + strand, within A4249_RS13310 at 2687.649 kb on + strand, within A4249_RS13310 at 2687.650 kb on - strand, within A4249_RS13310 at 2687.853 kb on + strand at 2687.853 kb on + strand at 2687.853 kb on + strand at 2687.854 kb on - strand at 2687.854 kb on - strand at 2687.854 kb on - strand at 2687.854 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,686,369 + A4249_RS13300 0.71 +0.7 2,686,370 - A4249_RS13300 0.71 -0.2 2,686,553 + -0.9 2,686,554 - -1.2 2,686,554 - +0.7 2,686,627 + -0.2 2,686,627 + +1.0 2,686,627 + -0.3 2,686,628 - -0.2 2,686,628 - -0.2 2,686,628 - +0.8 2,686,628 - -0.7 2,686,890 + A4249_RS13305 0.66 -0.1 2,686,891 - A4249_RS13305 0.67 +0.9 2,686,954 - A4249_RS13305 0.82 -0.7 2,686,967 + A4249_RS13305 0.85 -0.5 2,686,967 + A4249_RS13305 0.85 -0.6 2,686,967 + A4249_RS13305 0.85 +0.1 2,686,967 + A4249_RS13305 0.85 +0.3 2,686,967 + A4249_RS13305 0.85 +0.9 2,686,967 + A4249_RS13305 0.85 -1.0 2,686,967 + A4249_RS13305 0.85 +0.2 2,686,968 - A4249_RS13305 0.85 -0.3 2,687,289 + A4249_RS13310 0.31 -0.5 2,687,289 + A4249_RS13310 0.31 -1.0 2,687,367 + A4249_RS13310 0.40 -0.2 2,687,367 + A4249_RS13310 0.40 -0.4 2,687,367 + A4249_RS13310 0.40 -0.1 2,687,367 + A4249_RS13310 0.40 -0.6 2,687,368 - A4249_RS13310 0.40 -0.1 2,687,368 - A4249_RS13310 0.40 +0.3 2,687,368 - A4249_RS13310 0.40 +0.8 2,687,649 + A4249_RS13310 0.75 -0.6 2,687,649 + A4249_RS13310 0.75 +0.4 2,687,650 - A4249_RS13310 0.75 -2.1 2,687,853 + -0.6 2,687,853 + -0.8 2,687,853 + +0.1 2,687,854 - -0.7 2,687,854 - -1.3 2,687,854 - -0.4 2,687,854 - -0.2
Or see this region's nucleotide sequence