Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13165 and A4249_RS13170 are separated by 47 nucleotides A4249_RS13170 and A4249_RS13175 are separated by 168 nucleotides A4249_RS13175 and A4249_RS13180 are separated by 7 nucleotides
A4249_RS13165: A4249_RS13165 - RsmB/NOP family class I SAM-dependent RNA methyltransferase, at 2,650,543 to 2,651,880
_RS13165
A4249_RS13170: A4249_RS13170 - potassium transporter Kup, at 2,651,928 to 2,653,904
_RS13170
A4249_RS13175: A4249_RS13175 - Rrf2 family transcriptional regulator, at 2,654,073 to 2,654,543
_RS13175
A4249_RS13180: A4249_RS13180 - SDR family oxidoreductase, at 2,654,551 to 2,655,348
_RS13180
Position (kb)
2651
2652
2653
2654 Strain fitness (log2 ratio)
-2
-1
0
1 at 2651.372 kb on + strand, within A4249_RS13165 at 2651.372 kb on + strand, within A4249_RS13165 at 2651.372 kb on + strand, within A4249_RS13165 at 2651.373 kb on - strand, within A4249_RS13165 at 2651.373 kb on - strand, within A4249_RS13165 at 2651.373 kb on - strand, within A4249_RS13165 at 2651.483 kb on + strand, within A4249_RS13165 at 2651.483 kb on + strand, within A4249_RS13165 at 2651.484 kb on - strand, within A4249_RS13165 at 2651.484 kb on - strand, within A4249_RS13165 at 2651.484 kb on - strand, within A4249_RS13165 at 2651.932 kb on - strand at 2653.908 kb on + strand at 2653.908 kb on + strand at 2653.909 kb on - strand at 2653.959 kb on + strand at 2653.960 kb on - strand at 2654.050 kb on - strand at 2654.050 kb on - strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.118 kb on + strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.119 kb on - strand at 2654.120 kb on + strand, within A4249_RS13175 at 2654.121 kb on - strand, within A4249_RS13175 at 2654.121 kb on - strand, within A4249_RS13175 at 2654.393 kb on + strand, within A4249_RS13175 at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.610 kb on + strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.611 kb on - strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.614 kb on + strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand at 2654.615 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,651,372 + A4249_RS13165 0.62 +0.4 2,651,372 + A4249_RS13165 0.62 -0.6 2,651,372 + A4249_RS13165 0.62 +0.7 2,651,373 - A4249_RS13165 0.62 -0.8 2,651,373 - A4249_RS13165 0.62 +0.5 2,651,373 - A4249_RS13165 0.62 -0.7 2,651,483 + A4249_RS13165 0.70 +0.2 2,651,483 + A4249_RS13165 0.70 -1.5 2,651,484 - A4249_RS13165 0.70 -0.1 2,651,484 - A4249_RS13165 0.70 +0.3 2,651,484 - A4249_RS13165 0.70 -0.5 2,651,932 - +0.2 2,653,908 + -0.5 2,653,908 + +0.0 2,653,909 - +0.2 2,653,959 + -0.3 2,653,960 - +1.5 2,654,050 - +0.5 2,654,050 - -1.1 2,654,118 + +0.8 2,654,118 + -0.3 2,654,118 + -0.3 2,654,118 + -0.1 2,654,118 + -1.9 2,654,118 + -0.1 2,654,118 + +0.4 2,654,118 + -1.8 2,654,119 - +0.2 2,654,119 - +0.8 2,654,119 - +0.7 2,654,119 - -0.2 2,654,119 - +0.9 2,654,119 - -0.1 2,654,119 - -0.9 2,654,119 - -0.4 2,654,119 - +0.2 2,654,119 - +0.8 2,654,119 - +0.7 2,654,119 - -0.1 2,654,119 - +0.3 2,654,120 + A4249_RS13175 0.10 +0.8 2,654,121 - A4249_RS13175 0.10 -0.3 2,654,121 - A4249_RS13175 0.10 -0.1 2,654,393 + A4249_RS13175 0.68 -0.9 2,654,610 + +1.0 2,654,610 + +0.2 2,654,610 + -0.5 2,654,610 + +0.0 2,654,611 - -2.3 2,654,611 - +1.2 2,654,611 - -0.1 2,654,611 - -1.6 2,654,611 - +0.8 2,654,611 - -0.0 2,654,611 - +0.7 2,654,611 - -0.6 2,654,611 - +1.2 2,654,614 + +0.3 2,654,614 + +0.9 2,654,614 + -0.1 2,654,614 + -0.1 2,654,614 + +0.1 2,654,615 - -0.3 2,654,615 - +0.0 2,654,615 - +1.0 2,654,615 - +0.3 2,654,615 - +0.5 2,654,615 - +0.5 2,654,615 - -0.5
Or see this region's nucleotide sequence