Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12160 and A4249_RS12165 overlap by 32 nucleotides A4249_RS12165 and A4249_RS12170 are separated by 255 nucleotides A4249_RS12170 and A4249_RS12175 are separated by 6 nucleotides A4249_RS12175 and A4249_RS12180 are separated by 456 nucleotides
A4249_RS12160: A4249_RS12160 - ATP-binding protein, at 2,441,039 to 2,442,649
_RS12160
A4249_RS12165: A4249_RS12165 - response regulator transcription factor, at 2,442,618 to 2,443,322
_RS12165
A4249_RS12170: A4249_RS12170 - hypothetical protein, at 2,443,578 to 2,445,296
_RS12170
A4249_RS12175: A4249_RS12175 - zf-TFIIB domain-containing protein, at 2,445,303 to 2,445,680
_RS12175
A4249_RS12180: A4249_RS12180 - NAD(P)/FAD-dependent oxidoreductase, at 2,446,137 to 2,447,294
_RS12180
Position (kb)
2443
2444
2445
2446 Strain fitness (log2 ratio)
-2
-1
0
1 at 2443.344 kb on - strand at 2443.344 kb on - strand at 2443.344 kb on - strand at 2443.377 kb on - strand at 2443.405 kb on + strand at 2443.406 kb on - strand at 2443.406 kb on - strand at 2443.523 kb on - strand at 2443.552 kb on - strand at 2443.552 kb on - strand at 2443.552 kb on - strand at 2443.596 kb on + strand at 2443.596 kb on + strand at 2443.597 kb on - strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.605 kb on + strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.606 kb on - strand at 2443.860 kb on + strand, within A4249_RS12170 at 2443.860 kb on + strand, within A4249_RS12170 at 2443.860 kb on + strand, within A4249_RS12170 at 2443.861 kb on - strand, within A4249_RS12170 at 2443.861 kb on - strand, within A4249_RS12170 at 2444.067 kb on + strand, within A4249_RS12170 at 2444.067 kb on + strand, within A4249_RS12170 at 2444.767 kb on - strand, within A4249_RS12170 at 2445.031 kb on + strand, within A4249_RS12170 at 2445.032 kb on - strand, within A4249_RS12170 at 2445.032 kb on - strand, within A4249_RS12170 at 2445.295 kb on - strand at 2445.347 kb on - strand, within A4249_RS12175 at 2445.347 kb on - strand, within A4249_RS12175 at 2445.353 kb on - strand, within A4249_RS12175 at 2445.382 kb on + strand, within A4249_RS12175 at 2445.466 kb on + strand, within A4249_RS12175 at 2445.467 kb on - strand, within A4249_RS12175 at 2445.467 kb on - strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.493 kb on + strand, within A4249_RS12175 at 2445.494 kb on - strand, within A4249_RS12175 at 2445.853 kb on - strand at 2445.853 kb on - strand at 2445.947 kb on - strand at 2445.956 kb on + strand at 2445.956 kb on + strand at 2446.002 kb on + strand at 2446.002 kb on + strand at 2446.003 kb on - strand at 2446.003 kb on - strand at 2446.003 kb on - strand at 2446.003 kb on - strand at 2446.003 kb on - strand at 2446.067 kb on + strand at 2446.068 kb on - strand at 2446.068 kb on - strand at 2446.068 kb on - strand at 2446.068 kb on - strand at 2446.068 kb on - strand at 2446.068 kb on - strand at 2446.076 kb on + strand at 2446.077 kb on - strand at 2446.077 kb on - strand at 2446.187 kb on + strand at 2446.188 kb on - strand at 2446.188 kb on - strand at 2446.188 kb on - strand at 2446.189 kb on + strand at 2446.234 kb on + strand at 2446.234 kb on + strand at 2446.234 kb on + strand at 2446.235 kb on - strand at 2446.235 kb on - strand at 2446.235 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 2,443,344 - -0.0 2,443,344 - -0.2 2,443,344 - +0.5 2,443,377 - -0.3 2,443,405 + +1.0 2,443,406 - +0.3 2,443,406 - -0.3 2,443,523 - +0.8 2,443,552 - +0.1 2,443,552 - -0.1 2,443,552 - +0.2 2,443,596 + +1.2 2,443,596 + -1.2 2,443,597 - -0.8 2,443,605 + -0.3 2,443,605 + -0.9 2,443,605 + -0.3 2,443,605 + -1.1 2,443,605 + +1.5 2,443,605 + -0.9 2,443,606 - -0.1 2,443,606 - -1.4 2,443,606 - -1.5 2,443,606 - -0.3 2,443,606 - +1.2 2,443,606 - -0.3 2,443,860 + A4249_RS12170 0.16 +1.5 2,443,860 + A4249_RS12170 0.16 +0.0 2,443,860 + A4249_RS12170 0.16 -1.8 2,443,861 - A4249_RS12170 0.16 -0.1 2,443,861 - A4249_RS12170 0.16 +0.5 2,444,067 + A4249_RS12170 0.28 +1.1 2,444,067 + A4249_RS12170 0.28 -0.3 2,444,767 - A4249_RS12170 0.69 +0.3 2,445,031 + A4249_RS12170 0.85 -0.7 2,445,032 - A4249_RS12170 0.85 -0.8 2,445,032 - A4249_RS12170 0.85 -1.1 2,445,295 - -0.1 2,445,347 - A4249_RS12175 0.12 -0.5 2,445,347 - A4249_RS12175 0.12 -0.2 2,445,353 - A4249_RS12175 0.13 +0.9 2,445,382 + A4249_RS12175 0.21 -0.5 2,445,466 + A4249_RS12175 0.43 +0.3 2,445,467 - A4249_RS12175 0.43 -1.2 2,445,467 - A4249_RS12175 0.43 +0.2 2,445,493 + A4249_RS12175 0.50 +0.4 2,445,493 + A4249_RS12175 0.50 -0.3 2,445,493 + A4249_RS12175 0.50 -0.2 2,445,493 + A4249_RS12175 0.50 -0.1 2,445,493 + A4249_RS12175 0.50 +0.5 2,445,493 + A4249_RS12175 0.50 -0.0 2,445,493 + A4249_RS12175 0.50 -0.1 2,445,493 + A4249_RS12175 0.50 -0.2 2,445,493 + A4249_RS12175 0.50 +0.0 2,445,494 - A4249_RS12175 0.51 -0.2 2,445,853 - +0.3 2,445,853 - +0.1 2,445,947 - +0.3 2,445,956 + +0.1 2,445,956 + -0.5 2,446,002 + -0.3 2,446,002 + +0.5 2,446,003 - +0.7 2,446,003 - +0.5 2,446,003 - -0.3 2,446,003 - -0.5 2,446,003 - -0.0 2,446,067 + +0.3 2,446,068 - +1.0 2,446,068 - -0.8 2,446,068 - +0.9 2,446,068 - -0.1 2,446,068 - +0.4 2,446,068 - -0.0 2,446,076 + +0.6 2,446,077 - +1.0 2,446,077 - -0.1 2,446,187 + +0.9 2,446,188 - +0.5 2,446,188 - +0.0 2,446,188 - -0.4 2,446,189 + +0.6 2,446,234 + +0.8 2,446,234 + -0.0 2,446,234 + -0.6 2,446,235 - +0.5 2,446,235 - +0.8 2,446,235 - -0.2
Or see this region's nucleotide sequence