Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10320

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10310 and A4249_RS10315 are separated by 195 nucleotidesA4249_RS10315 and A4249_RS10320 overlap by 13 nucleotidesA4249_RS10320 and A4249_RS10325 are separated by 86 nucleotides A4249_RS10310: A4249_RS10310 - hypothetical protein, at 2,070,018 to 2,070,212 _RS10310 A4249_RS10315: A4249_RS10315 - response regulator transcription factor, at 2,070,408 to 2,071,124 _RS10315 A4249_RS10320: A4249_RS10320 - HAMP domain-containing sensor histidine kinase, at 2,071,112 to 2,072,425 _RS10320 A4249_RS10325: A4249_RS10325 - serine hydrolase, at 2,072,512 to 2,073,891 _RS10325 Position (kb) 2071 2072 2073Strain fitness (log2 ratio) -1 0 1at 2070.343 kb on - strandat 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.717 kb on + strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.718 kb on - strand, within A4249_RS10315at 2070.719 kb on + strand, within A4249_RS10315at 2070.719 kb on + strand, within A4249_RS10315at 2070.719 kb on + strand, within A4249_RS10315at 2070.719 kb on + strand, within A4249_RS10315at 2070.720 kb on - strand, within A4249_RS10315at 2070.720 kb on - strand, within A4249_RS10315at 2070.720 kb on - strand, within A4249_RS10315at 2070.720 kb on - strand, within A4249_RS10315at 2070.720 kb on - strand, within A4249_RS10315at 2070.720 kb on - strand, within A4249_RS10315at 2071.089 kb on + strandat 2071.089 kb on + strandat 2071.089 kb on + strandat 2071.089 kb on + strandat 2071.089 kb on + strandat 2071.089 kb on + strandat 2071.090 kb on - strandat 2071.090 kb on - strandat 2071.090 kb on - strandat 2071.090 kb on - strandat 2071.090 kb on - strandat 2071.091 kb on + strandat 2071.091 kb on + strandat 2071.091 kb on + strandat 2071.091 kb on + strandat 2071.091 kb on + strandat 2071.091 kb on + strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.092 kb on - strandat 2071.111 kb on + strandat 2071.111 kb on + strandat 2071.111 kb on + strandat 2071.111 kb on + strandat 2071.111 kb on + strandat 2071.112 kb on - strandat 2071.122 kb on + strandat 2071.122 kb on + strandat 2071.122 kb on + strandat 2071.123 kb on - strandat 2071.123 kb on - strandat 2071.123 kb on - strandat 2072.270 kb on + strand, within A4249_RS10320at 2072.270 kb on + strand, within A4249_RS10320at 2072.271 kb on - strand, within A4249_RS10320at 2072.271 kb on - strand, within A4249_RS10320at 2072.271 kb on - strand, within A4249_RS10320at 2073.079 kb on + strand, within A4249_RS10325at 2073.079 kb on + strand, within A4249_RS10325at 2073.079 kb on + strand, within A4249_RS10325at 2073.079 kb on + strand, within A4249_RS10325at 2073.079 kb on + strand, within A4249_RS10325at 2073.079 kb on + strand, within A4249_RS10325at 2073.080 kb on - strand, within A4249_RS10325at 2073.080 kb on - strand, within A4249_RS10325at 2073.080 kb on - strand, within A4249_RS10325at 2073.080 kb on - strand, within A4249_RS10325at 2073.124 kb on + strand, within A4249_RS10325at 2073.125 kb on - strand, within A4249_RS10325at 2073.125 kb on - strand, within A4249_RS10325at 2073.125 kb on - strand, within A4249_RS10325at 2073.182 kb on - strand, within A4249_RS10325at 2073.182 kb on - strand, within A4249_RS10325at 2073.224 kb on - strand, within A4249_RS10325at 2073.224 kb on - strand, within A4249_RS10325at 2073.259 kb on + strand, within A4249_RS10325at 2073.259 kb on + strand, within A4249_RS10325at 2073.259 kb on + strand, within A4249_RS10325at 2073.259 kb on + strand, within A4249_RS10325at 2073.260 kb on - strand, within A4249_RS10325at 2073.260 kb on - strand, within A4249_RS10325at 2073.260 kb on - strand, within A4249_RS10325at 2073.298 kb on + strand, within A4249_RS10325at 2073.298 kb on + strand, within A4249_RS10325at 2073.298 kb on + strand, within A4249_RS10325at 2073.298 kb on + strand, within A4249_RS10325at 2073.298 kb on + strand, within A4249_RS10325at 2073.299 kb on - strand, within A4249_RS10325at 2073.299 kb on - strand, within A4249_RS10325at 2073.299 kb on - strand, within A4249_RS10325at 2073.299 kb on - strand, within A4249_RS10325at 2073.404 kb on - strand, within A4249_RS10325

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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2,070,343 - -0.7
2,070,717 + A4249_RS10315 0.43 +0.9
2,070,717 + A4249_RS10315 0.43 +0.0
2,070,717 + A4249_RS10315 0.43 +0.1
2,070,717 + A4249_RS10315 0.43 -0.2
2,070,717 + A4249_RS10315 0.43 -0.6
2,070,717 + A4249_RS10315 0.43 +0.5
2,070,717 + A4249_RS10315 0.43 +0.2
2,070,717 + A4249_RS10315 0.43 +0.4
2,070,717 + A4249_RS10315 0.43 +0.8
2,070,717 + A4249_RS10315 0.43 +0.2
2,070,718 - A4249_RS10315 0.43 +0.1
2,070,718 - A4249_RS10315 0.43 -0.6
2,070,718 - A4249_RS10315 0.43 -0.0
2,070,718 - A4249_RS10315 0.43 -1.2
2,070,718 - A4249_RS10315 0.43 +0.2
2,070,718 - A4249_RS10315 0.43 +0.7
2,070,718 - A4249_RS10315 0.43 +0.1
2,070,718 - A4249_RS10315 0.43 -0.2
2,070,718 - A4249_RS10315 0.43 -0.1
2,070,719 + A4249_RS10315 0.43 +0.2
2,070,719 + A4249_RS10315 0.43 +0.4
2,070,719 + A4249_RS10315 0.43 +0.7
2,070,719 + A4249_RS10315 0.43 +0.8
2,070,720 - A4249_RS10315 0.44 -1.2
2,070,720 - A4249_RS10315 0.44 -0.3
2,070,720 - A4249_RS10315 0.44 -0.6
2,070,720 - A4249_RS10315 0.44 +0.1
2,070,720 - A4249_RS10315 0.44 +0.8
2,070,720 - A4249_RS10315 0.44 +0.5
2,071,089 + -1.2
2,071,089 + -0.7
2,071,089 + -0.6
2,071,089 + -0.8
2,071,089 + -0.0
2,071,089 + -0.2
2,071,090 - +0.3
2,071,090 - -0.2
2,071,090 - +0.1
2,071,090 - -1.3
2,071,090 - -0.5
2,071,091 + -1.2
2,071,091 + -0.1
2,071,091 + -0.2
2,071,091 + +0.4
2,071,091 + -0.8
2,071,091 + -0.0
2,071,092 - +0.2
2,071,092 - +0.4
2,071,092 - -0.2
2,071,092 - -0.4
2,071,092 - -0.9
2,071,092 - -0.2
2,071,092 - +0.7
2,071,092 - +0.3
2,071,092 - -1.3
2,071,092 - -0.2
2,071,111 + -0.3
2,071,111 + +0.6
2,071,111 + -1.0
2,071,111 + -0.4
2,071,111 + -0.2
2,071,112 - -0.3
2,071,122 + +0.4
2,071,122 + -0.7
2,071,122 + -0.2
2,071,123 - +0.5
2,071,123 - +0.5
2,071,123 - +0.5
2,072,270 + A4249_RS10320 0.88 +0.1
2,072,270 + A4249_RS10320 0.88 +0.1
2,072,271 - A4249_RS10320 0.88 +0.3
2,072,271 - A4249_RS10320 0.88 +0.2
2,072,271 - A4249_RS10320 0.88 -0.4
2,073,079 + A4249_RS10325 0.41 -0.1
2,073,079 + A4249_RS10325 0.41 -0.4
2,073,079 + A4249_RS10325 0.41 +0.7
2,073,079 + A4249_RS10325 0.41 +0.8
2,073,079 + A4249_RS10325 0.41 -0.8
2,073,079 + A4249_RS10325 0.41 +0.1
2,073,080 - A4249_RS10325 0.41 -0.8
2,073,080 - A4249_RS10325 0.41 +0.3
2,073,080 - A4249_RS10325 0.41 +0.4
2,073,080 - A4249_RS10325 0.41 +0.5
2,073,124 + A4249_RS10325 0.44 +0.1
2,073,125 - A4249_RS10325 0.44 +0.4
2,073,125 - A4249_RS10325 0.44 -0.8
2,073,125 - A4249_RS10325 0.44 -0.8
2,073,182 - A4249_RS10325 0.49 +0.2
2,073,182 - A4249_RS10325 0.49 +0.7
2,073,224 - A4249_RS10325 0.52 +0.2
2,073,224 - A4249_RS10325 0.52 -0.2
2,073,259 + A4249_RS10325 0.54 +0.6
2,073,259 + A4249_RS10325 0.54 -0.0
2,073,259 + A4249_RS10325 0.54 +0.4
2,073,259 + A4249_RS10325 0.54 +0.3
2,073,260 - A4249_RS10325 0.54 +1.7
2,073,260 - A4249_RS10325 0.54 -0.1
2,073,260 - A4249_RS10325 0.54 +0.2
2,073,298 + A4249_RS10325 0.57 -0.2
2,073,298 + A4249_RS10325 0.57 -0.5
2,073,298 + A4249_RS10325 0.57 +0.2
2,073,298 + A4249_RS10325 0.57 +0.4
2,073,298 + A4249_RS10325 0.57 +1.1
2,073,299 - A4249_RS10325 0.57 +0.2
2,073,299 - A4249_RS10325 0.57 +0.9
2,073,299 - A4249_RS10325 0.57 +0.7
2,073,299 - A4249_RS10325 0.57 +0.1
2,073,404 - A4249_RS10325 0.65 -0.1

Or see this region's nucleotide sequence