Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08965 and A4249_RS08970 are separated by 37 nucleotides A4249_RS08970 and A4249_RS08975 are separated by 20 nucleotides A4249_RS08975 and A4249_RS08980 are separated by 4 nucleotides A4249_RS08980 and A4249_RS08985 are separated by 4 nucleotides
A4249_RS08965: A4249_RS08965 - Hsp33 family molecular chaperone, at 1,795,173 to 1,796,096
_RS08965
A4249_RS08970: A4249_RS08970 - phosphate regulon transcriptional regulator PhoB, at 1,796,134 to 1,796,826
_RS08970
A4249_RS08975: A4249_RS08975 - phosphate signaling complex protein PhoU, at 1,796,847 to 1,797,572
_RS08975
A4249_RS08980: A4249_RS08980 - phosphate ABC transporter ATP-binding protein PstB, at 1,797,577 to 1,798,524
_RS08980
A4249_RS08985: A4249_RS08985 - phosphate ABC transporter permease PstA, at 1,798,529 to 1,799,833
_RS08985
Position (kb)
1796
1797
1798 Strain fitness (log2 ratio)
-2
-1
0
1 at 1796.055 kb on + strand at 1796.055 kb on + strand at 1796.055 kb on + strand at 1796.135 kb on + strand at 1796.135 kb on + strand at 1796.135 kb on + strand at 1796.136 kb on - strand at 1796.136 kb on - strand at 1796.136 kb on - strand at 1796.136 kb on - strand at 1797.547 kb on + strand at 1797.578 kb on + strand at 1797.599 kb on + strand at 1797.599 kb on + strand at 1797.599 kb on + strand at 1797.599 kb on + strand at 1797.600 kb on - strand at 1797.600 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 1,796,055 + +0.3 1,796,055 + -0.6 1,796,055 + +0.3 1,796,135 + -2.1 1,796,135 + +0.6 1,796,135 + -0.7 1,796,136 - +0.3 1,796,136 - -2.0 1,796,136 - -1.0 1,796,136 - -0.5 1,797,547 + +0.1 1,797,578 + -0.8 1,797,599 + +0.5 1,797,599 + -0.5 1,797,599 + +0.5 1,797,599 + -0.3 1,797,600 - -0.0 1,797,600 - -0.6
Or see this region's nucleotide sequence