Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07795

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07785 and A4249_RS07790 are separated by 111 nucleotidesA4249_RS07790 and A4249_RS07795 are separated by 113 nucleotidesA4249_RS07795 and A4249_RS07800 are separated by 173 nucleotides A4249_RS07785: A4249_RS07785 - efflux RND transporter periplasmic adaptor subunit, at 1,557,828 to 1,558,931 _RS07785 A4249_RS07790: A4249_RS07790 - hypothetical protein, at 1,559,043 to 1,559,699 _RS07790 A4249_RS07795: A4249_RS07795 - class II aldolase/adducin family protein, at 1,559,813 to 1,560,577 _RS07795 A4249_RS07800: A4249_RS07800 - DUF2336 domain-containing protein, at 1,560,751 to 1,561,875 _RS07800 Position (kb) 1559 1560 1561Strain fitness (log2 ratio) -2 -1 0 1 2at 1558.994 kb on + strandat 1558.994 kb on + strandat 1558.994 kb on + strandat 1558.994 kb on + strandat 1558.995 kb on - strandat 1558.995 kb on - strandat 1558.998 kb on + strandat 1558.998 kb on + strandat 1558.998 kb on + strandat 1558.998 kb on + strandat 1558.999 kb on - strandat 1558.999 kb on - strandat 1558.999 kb on - strandat 1558.999 kb on - strandat 1558.999 kb on - strandat 1559.004 kb on + strandat 1559.004 kb on + strandat 1559.004 kb on + strandat 1559.044 kb on + strandat 1559.044 kb on + strandat 1559.045 kb on - strandat 1559.045 kb on - strandat 1559.045 kb on - strandat 1559.419 kb on + strand, within A4249_RS07790at 1559.420 kb on - strand, within A4249_RS07790at 1559.420 kb on - strand, within A4249_RS07790at 1559.450 kb on + strand, within A4249_RS07790at 1559.451 kb on - strand, within A4249_RS07790at 1559.451 kb on - strand, within A4249_RS07790at 1559.452 kb on + strand, within A4249_RS07790at 1559.452 kb on + strand, within A4249_RS07790at 1559.453 kb on - strand, within A4249_RS07790at 1559.453 kb on - strand, within A4249_RS07790at 1559.453 kb on - strand, within A4249_RS07790at 1559.453 kb on - strand, within A4249_RS07790at 1559.536 kb on + strand, within A4249_RS07790at 1559.537 kb on - strand, within A4249_RS07790at 1559.537 kb on - strand, within A4249_RS07790at 1559.609 kb on - strand, within A4249_RS07790at 1559.609 kb on - strand, within A4249_RS07790at 1559.609 kb on - strand, within A4249_RS07790at 1559.619 kb on + strand, within A4249_RS07790at 1559.619 kb on + strand, within A4249_RS07790at 1559.619 kb on + strand, within A4249_RS07790at 1559.620 kb on - strand, within A4249_RS07790at 1559.620 kb on - strand, within A4249_RS07790at 1559.620 kb on - strand, within A4249_RS07790at 1559.708 kb on - strandat 1559.814 kb on + strandat 1559.815 kb on - strandat 1559.815 kb on - strandat 1559.815 kb on - strandat 1559.815 kb on - strandat 1559.824 kb on - strandat 1560.167 kb on + strand, within A4249_RS07795at 1560.167 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.235 kb on + strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.236 kb on - strand, within A4249_RS07795at 1560.318 kb on + strand, within A4249_RS07795at 1560.319 kb on - strand, within A4249_RS07795at 1560.319 kb on - strand, within A4249_RS07795at 1560.319 kb on - strand, within A4249_RS07795at 1560.319 kb on - strand, within A4249_RS07795at 1560.390 kb on + strand, within A4249_RS07795at 1560.390 kb on + strand, within A4249_RS07795at 1560.390 kb on + strand, within A4249_RS07795at 1560.391 kb on - strand, within A4249_RS07795at 1560.448 kb on + strand, within A4249_RS07795at 1560.448 kb on + strand, within A4249_RS07795at 1560.448 kb on + strand, within A4249_RS07795at 1560.449 kb on - strand, within A4249_RS07795at 1560.449 kb on - strand, within A4249_RS07795at 1560.449 kb on - strand, within A4249_RS07795at 1560.449 kb on - strand, within A4249_RS07795at 1560.715 kb on + strandat 1560.715 kb on + strandat 1560.715 kb on + strandat 1560.715 kb on + strandat 1560.715 kb on + strandat 1560.716 kb on - strandat 1560.716 kb on - strandat 1560.716 kb on - strandat 1560.716 kb on - strandat 1560.716 kb on - strandat 1560.813 kb on + strandat 1560.813 kb on + strandat 1560.813 kb on + strandat 1560.813 kb on + strandat 1560.813 kb on + strandat 1560.814 kb on - strandat 1560.814 kb on - strandat 1560.814 kb on - strandat 1560.814 kb on - strandat 1560.814 kb on - strandat 1560.814 kb on - strandat 1560.814 kb on - strandat 1560.864 kb on + strand, within A4249_RS07800at 1560.864 kb on + strand, within A4249_RS07800at 1560.864 kb on + strand, within A4249_RS07800at 1560.864 kb on + strand, within A4249_RS07800at 1560.865 kb on - strand, within A4249_RS07800at 1560.865 kb on - strand, within A4249_RS07800at 1560.865 kb on - strand, within A4249_RS07800at 1560.865 kb on - strand, within A4249_RS07800at 1561.026 kb on + strand, within A4249_RS07800at 1561.026 kb on + strand, within A4249_RS07800at 1561.026 kb on + strand, within A4249_RS07800at 1561.026 kb on + strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.027 kb on - strand, within A4249_RS07800at 1561.104 kb on - strand, within A4249_RS07800at 1561.104 kb on - strand, within A4249_RS07800at 1561.104 kb on - strand, within A4249_RS07800at 1561.236 kb on + strand, within A4249_RS07800at 1561.357 kb on + strand, within A4249_RS07800at 1561.357 kb on + strand, within A4249_RS07800at 1561.357 kb on + strand, within A4249_RS07800at 1561.357 kb on + strand, within A4249_RS07800at 1561.357 kb on + strand, within A4249_RS07800at 1561.358 kb on - strand, within A4249_RS07800at 1561.358 kb on - strand, within A4249_RS07800at 1561.358 kb on - strand, within A4249_RS07800at 1561.358 kb on - strand, within A4249_RS07800at 1561.358 kb on - strand, within A4249_RS07800at 1561.358 kb on - strand, within A4249_RS07800

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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1,558,994 + -0.0
1,558,994 + +0.6
1,558,994 + +0.4
1,558,994 + -0.4
1,558,995 - +1.1
1,558,995 - -1.1
1,558,998 + +1.6
1,558,998 + -0.9
1,558,998 + -0.6
1,558,998 + +0.5
1,558,999 - +0.6
1,558,999 - +0.5
1,558,999 - -0.4
1,558,999 - +0.1
1,558,999 - +0.2
1,559,004 + +0.4
1,559,004 + +0.3
1,559,004 + -0.6
1,559,044 + +0.9
1,559,044 + -0.6
1,559,045 - -0.4
1,559,045 - +0.6
1,559,045 - +0.0
1,559,419 + A4249_RS07790 0.57 -0.1
1,559,420 - A4249_RS07790 0.57 -1.2
1,559,420 - A4249_RS07790 0.57 -0.4
1,559,450 + A4249_RS07790 0.62 +0.5
1,559,451 - A4249_RS07790 0.62 -0.9
1,559,451 - A4249_RS07790 0.62 +0.7
1,559,452 + A4249_RS07790 0.62 -0.1
1,559,452 + A4249_RS07790 0.62 +0.6
1,559,453 - A4249_RS07790 0.62 +0.9
1,559,453 - A4249_RS07790 0.62 +0.3
1,559,453 - A4249_RS07790 0.62 +0.1
1,559,453 - A4249_RS07790 0.62 -0.3
1,559,536 + A4249_RS07790 0.75 +0.1
1,559,537 - A4249_RS07790 0.75 +0.1
1,559,537 - A4249_RS07790 0.75 -1.3
1,559,609 - A4249_RS07790 0.86 +0.0
1,559,609 - A4249_RS07790 0.86 -0.8
1,559,609 - A4249_RS07790 0.86 -0.3
1,559,619 + A4249_RS07790 0.88 +0.2
1,559,619 + A4249_RS07790 0.88 -0.1
1,559,619 + A4249_RS07790 0.88 +0.0
1,559,620 - A4249_RS07790 0.88 -0.5
1,559,620 - A4249_RS07790 0.88 +0.2
1,559,620 - A4249_RS07790 0.88 +0.4
1,559,708 - +0.8
1,559,814 + -0.1
1,559,815 - +0.1
1,559,815 - +0.9
1,559,815 - -0.3
1,559,815 - +1.2
1,559,824 - +0.6
1,560,167 + A4249_RS07795 0.46 +0.1
1,560,167 + A4249_RS07795 0.46 -0.0
1,560,235 + A4249_RS07795 0.55 -1.0
1,560,235 + A4249_RS07795 0.55 +0.2
1,560,235 + A4249_RS07795 0.55 +0.6
1,560,235 + A4249_RS07795 0.55 -0.1
1,560,235 + A4249_RS07795 0.55 -0.2
1,560,235 + A4249_RS07795 0.55 +0.8
1,560,235 + A4249_RS07795 0.55 -0.1
1,560,235 + A4249_RS07795 0.55 -0.7
1,560,235 + A4249_RS07795 0.55 -0.9
1,560,235 + A4249_RS07795 0.55 +1.5
1,560,235 + A4249_RS07795 0.55 +0.4
1,560,236 - A4249_RS07795 0.55 -0.1
1,560,236 - A4249_RS07795 0.55 +0.5
1,560,236 - A4249_RS07795 0.55 -0.4
1,560,236 - A4249_RS07795 0.55 -0.9
1,560,236 - A4249_RS07795 0.55 -0.5
1,560,236 - A4249_RS07795 0.55 +0.2
1,560,236 - A4249_RS07795 0.55 +1.5
1,560,236 - A4249_RS07795 0.55 -0.1
1,560,236 - A4249_RS07795 0.55 -1.1
1,560,236 - A4249_RS07795 0.55 -0.4
1,560,236 - A4249_RS07795 0.55 +0.6
1,560,236 - A4249_RS07795 0.55 -1.6
1,560,236 - A4249_RS07795 0.55 +1.4
1,560,236 - A4249_RS07795 0.55 +1.2
1,560,318 + A4249_RS07795 0.66 -0.8
1,560,319 - A4249_RS07795 0.66 +0.1
1,560,319 - A4249_RS07795 0.66 +0.1
1,560,319 - A4249_RS07795 0.66 +0.7
1,560,319 - A4249_RS07795 0.66 +0.2
1,560,390 + A4249_RS07795 0.75 -0.4
1,560,390 + A4249_RS07795 0.75 -0.4
1,560,390 + A4249_RS07795 0.75 +0.4
1,560,391 - A4249_RS07795 0.76 +0.3
1,560,448 + A4249_RS07795 0.83 -1.4
1,560,448 + A4249_RS07795 0.83 +0.5
1,560,448 + A4249_RS07795 0.83 +0.1
1,560,449 - A4249_RS07795 0.83 +0.3
1,560,449 - A4249_RS07795 0.83 +0.4
1,560,449 - A4249_RS07795 0.83 -0.5
1,560,449 - A4249_RS07795 0.83 +1.2
1,560,715 + +0.0
1,560,715 + +0.0
1,560,715 + -0.3
1,560,715 + +0.2
1,560,715 + -0.5
1,560,716 - +1.5
1,560,716 - +0.3
1,560,716 - +0.1
1,560,716 - -0.5
1,560,716 - -0.2
1,560,813 + +0.2
1,560,813 + +0.4
1,560,813 + -0.2
1,560,813 + -1.2
1,560,813 + +1.7
1,560,814 - +0.5
1,560,814 - -0.7
1,560,814 - -0.2
1,560,814 - -0.8
1,560,814 - +0.2
1,560,814 - -0.1
1,560,814 - -0.7
1,560,864 + A4249_RS07800 0.10 +0.5
1,560,864 + A4249_RS07800 0.10 -0.9
1,560,864 + A4249_RS07800 0.10 -0.7
1,560,864 + A4249_RS07800 0.10 -0.8
1,560,865 - A4249_RS07800 0.10 +0.6
1,560,865 - A4249_RS07800 0.10 -0.8
1,560,865 - A4249_RS07800 0.10 -0.1
1,560,865 - A4249_RS07800 0.10 +1.9
1,561,026 + A4249_RS07800 0.24 -1.2
1,561,026 + A4249_RS07800 0.24 -0.2
1,561,026 + A4249_RS07800 0.24 +0.0
1,561,026 + A4249_RS07800 0.24 -1.2
1,561,027 - A4249_RS07800 0.25 -0.4
1,561,027 - A4249_RS07800 0.25 +0.0
1,561,027 - A4249_RS07800 0.25 +0.5
1,561,027 - A4249_RS07800 0.25 -0.8
1,561,027 - A4249_RS07800 0.25 -0.1
1,561,027 - A4249_RS07800 0.25 +1.0
1,561,027 - A4249_RS07800 0.25 -0.2
1,561,027 - A4249_RS07800 0.25 +0.9
1,561,104 - A4249_RS07800 0.31 +0.6
1,561,104 - A4249_RS07800 0.31 +0.7
1,561,104 - A4249_RS07800 0.31 -0.4
1,561,236 + A4249_RS07800 0.43 -0.7
1,561,357 + A4249_RS07800 0.54 +0.6
1,561,357 + A4249_RS07800 0.54 -1.1
1,561,357 + A4249_RS07800 0.54 -0.7
1,561,357 + A4249_RS07800 0.54 -0.5
1,561,357 + A4249_RS07800 0.54 -0.3
1,561,358 - A4249_RS07800 0.54 -0.4
1,561,358 - A4249_RS07800 0.54 -2.3
1,561,358 - A4249_RS07800 0.54 +0.4
1,561,358 - A4249_RS07800 0.54 -0.1
1,561,358 - A4249_RS07800 0.54 +0.1
1,561,358 - A4249_RS07800 0.54 +0.1

Or see this region's nucleotide sequence