Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07785 and A4249_RS07790 are separated by 111 nucleotides A4249_RS07790 and A4249_RS07795 are separated by 113 nucleotides A4249_RS07795 and A4249_RS07800 are separated by 173 nucleotides
A4249_RS07785: A4249_RS07785 - efflux RND transporter periplasmic adaptor subunit, at 1,557,828 to 1,558,931
_RS07785
A4249_RS07790: A4249_RS07790 - hypothetical protein, at 1,559,043 to 1,559,699
_RS07790
A4249_RS07795: A4249_RS07795 - class II aldolase/adducin family protein, at 1,559,813 to 1,560,577
_RS07795
A4249_RS07800: A4249_RS07800 - DUF2336 domain-containing protein, at 1,560,751 to 1,561,875
_RS07800
Position (kb)
1559
1560
1561 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1558.994 kb on + strand at 1558.994 kb on + strand at 1558.994 kb on + strand at 1558.994 kb on + strand at 1558.995 kb on - strand at 1558.995 kb on - strand at 1558.998 kb on + strand at 1558.998 kb on + strand at 1558.998 kb on + strand at 1558.998 kb on + strand at 1558.999 kb on - strand at 1558.999 kb on - strand at 1558.999 kb on - strand at 1558.999 kb on - strand at 1558.999 kb on - strand at 1559.004 kb on + strand at 1559.004 kb on + strand at 1559.004 kb on + strand at 1559.044 kb on + strand at 1559.044 kb on + strand at 1559.045 kb on - strand at 1559.045 kb on - strand at 1559.045 kb on - strand at 1559.419 kb on + strand, within A4249_RS07790 at 1559.420 kb on - strand, within A4249_RS07790 at 1559.420 kb on - strand, within A4249_RS07790 at 1559.450 kb on + strand, within A4249_RS07790 at 1559.451 kb on - strand, within A4249_RS07790 at 1559.451 kb on - strand, within A4249_RS07790 at 1559.452 kb on + strand, within A4249_RS07790 at 1559.452 kb on + strand, within A4249_RS07790 at 1559.453 kb on - strand, within A4249_RS07790 at 1559.453 kb on - strand, within A4249_RS07790 at 1559.453 kb on - strand, within A4249_RS07790 at 1559.453 kb on - strand, within A4249_RS07790 at 1559.536 kb on + strand, within A4249_RS07790 at 1559.537 kb on - strand, within A4249_RS07790 at 1559.537 kb on - strand, within A4249_RS07790 at 1559.609 kb on - strand, within A4249_RS07790 at 1559.609 kb on - strand, within A4249_RS07790 at 1559.609 kb on - strand, within A4249_RS07790 at 1559.619 kb on + strand, within A4249_RS07790 at 1559.619 kb on + strand, within A4249_RS07790 at 1559.619 kb on + strand, within A4249_RS07790 at 1559.620 kb on - strand, within A4249_RS07790 at 1559.620 kb on - strand, within A4249_RS07790 at 1559.620 kb on - strand, within A4249_RS07790 at 1559.708 kb on - strand at 1559.814 kb on + strand at 1559.815 kb on - strand at 1559.815 kb on - strand at 1559.815 kb on - strand at 1559.815 kb on - strand at 1559.824 kb on - strand at 1560.167 kb on + strand, within A4249_RS07795 at 1560.167 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.235 kb on + strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.236 kb on - strand, within A4249_RS07795 at 1560.318 kb on + strand, within A4249_RS07795 at 1560.319 kb on - strand, within A4249_RS07795 at 1560.319 kb on - strand, within A4249_RS07795 at 1560.319 kb on - strand, within A4249_RS07795 at 1560.319 kb on - strand, within A4249_RS07795 at 1560.390 kb on + strand, within A4249_RS07795 at 1560.390 kb on + strand, within A4249_RS07795 at 1560.390 kb on + strand, within A4249_RS07795 at 1560.391 kb on - strand, within A4249_RS07795 at 1560.448 kb on + strand, within A4249_RS07795 at 1560.448 kb on + strand, within A4249_RS07795 at 1560.448 kb on + strand, within A4249_RS07795 at 1560.449 kb on - strand, within A4249_RS07795 at 1560.449 kb on - strand, within A4249_RS07795 at 1560.449 kb on - strand, within A4249_RS07795 at 1560.449 kb on - strand, within A4249_RS07795 at 1560.715 kb on + strand at 1560.715 kb on + strand at 1560.715 kb on + strand at 1560.715 kb on + strand at 1560.715 kb on + strand at 1560.716 kb on - strand at 1560.716 kb on - strand at 1560.716 kb on - strand at 1560.716 kb on - strand at 1560.716 kb on - strand at 1560.813 kb on + strand at 1560.813 kb on + strand at 1560.813 kb on + strand at 1560.813 kb on + strand at 1560.813 kb on + strand at 1560.814 kb on - strand at 1560.814 kb on - strand at 1560.814 kb on - strand at 1560.814 kb on - strand at 1560.814 kb on - strand at 1560.814 kb on - strand at 1560.814 kb on - strand at 1560.864 kb on + strand, within A4249_RS07800 at 1560.864 kb on + strand, within A4249_RS07800 at 1560.864 kb on + strand, within A4249_RS07800 at 1560.864 kb on + strand, within A4249_RS07800 at 1560.865 kb on - strand, within A4249_RS07800 at 1560.865 kb on - strand, within A4249_RS07800 at 1560.865 kb on - strand, within A4249_RS07800 at 1560.865 kb on - strand, within A4249_RS07800 at 1561.026 kb on + strand, within A4249_RS07800 at 1561.026 kb on + strand, within A4249_RS07800 at 1561.026 kb on + strand, within A4249_RS07800 at 1561.026 kb on + strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.027 kb on - strand, within A4249_RS07800 at 1561.104 kb on - strand, within A4249_RS07800 at 1561.104 kb on - strand, within A4249_RS07800 at 1561.104 kb on - strand, within A4249_RS07800 at 1561.236 kb on + strand, within A4249_RS07800 at 1561.357 kb on + strand, within A4249_RS07800 at 1561.357 kb on + strand, within A4249_RS07800 at 1561.357 kb on + strand, within A4249_RS07800 at 1561.357 kb on + strand, within A4249_RS07800 at 1561.357 kb on + strand, within A4249_RS07800 at 1561.358 kb on - strand, within A4249_RS07800 at 1561.358 kb on - strand, within A4249_RS07800 at 1561.358 kb on - strand, within A4249_RS07800 at 1561.358 kb on - strand, within A4249_RS07800 at 1561.358 kb on - strand, within A4249_RS07800 at 1561.358 kb on - strand, within A4249_RS07800
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 1,558,994 + -0.0 1,558,994 + +0.6 1,558,994 + +0.4 1,558,994 + -0.4 1,558,995 - +1.1 1,558,995 - -1.1 1,558,998 + +1.6 1,558,998 + -0.9 1,558,998 + -0.6 1,558,998 + +0.5 1,558,999 - +0.6 1,558,999 - +0.5 1,558,999 - -0.4 1,558,999 - +0.1 1,558,999 - +0.2 1,559,004 + +0.4 1,559,004 + +0.3 1,559,004 + -0.6 1,559,044 + +0.9 1,559,044 + -0.6 1,559,045 - -0.4 1,559,045 - +0.6 1,559,045 - +0.0 1,559,419 + A4249_RS07790 0.57 -0.1 1,559,420 - A4249_RS07790 0.57 -1.2 1,559,420 - A4249_RS07790 0.57 -0.4 1,559,450 + A4249_RS07790 0.62 +0.5 1,559,451 - A4249_RS07790 0.62 -0.9 1,559,451 - A4249_RS07790 0.62 +0.7 1,559,452 + A4249_RS07790 0.62 -0.1 1,559,452 + A4249_RS07790 0.62 +0.6 1,559,453 - A4249_RS07790 0.62 +0.9 1,559,453 - A4249_RS07790 0.62 +0.3 1,559,453 - A4249_RS07790 0.62 +0.1 1,559,453 - A4249_RS07790 0.62 -0.3 1,559,536 + A4249_RS07790 0.75 +0.1 1,559,537 - A4249_RS07790 0.75 +0.1 1,559,537 - A4249_RS07790 0.75 -1.3 1,559,609 - A4249_RS07790 0.86 +0.0 1,559,609 - A4249_RS07790 0.86 -0.8 1,559,609 - A4249_RS07790 0.86 -0.3 1,559,619 + A4249_RS07790 0.88 +0.2 1,559,619 + A4249_RS07790 0.88 -0.1 1,559,619 + A4249_RS07790 0.88 +0.0 1,559,620 - A4249_RS07790 0.88 -0.5 1,559,620 - A4249_RS07790 0.88 +0.2 1,559,620 - A4249_RS07790 0.88 +0.4 1,559,708 - +0.8 1,559,814 + -0.1 1,559,815 - +0.1 1,559,815 - +0.9 1,559,815 - -0.3 1,559,815 - +1.2 1,559,824 - +0.6 1,560,167 + A4249_RS07795 0.46 +0.1 1,560,167 + A4249_RS07795 0.46 -0.0 1,560,235 + A4249_RS07795 0.55 -1.0 1,560,235 + A4249_RS07795 0.55 +0.2 1,560,235 + A4249_RS07795 0.55 +0.6 1,560,235 + A4249_RS07795 0.55 -0.1 1,560,235 + A4249_RS07795 0.55 -0.2 1,560,235 + A4249_RS07795 0.55 +0.8 1,560,235 + A4249_RS07795 0.55 -0.1 1,560,235 + A4249_RS07795 0.55 -0.7 1,560,235 + A4249_RS07795 0.55 -0.9 1,560,235 + A4249_RS07795 0.55 +1.5 1,560,235 + A4249_RS07795 0.55 +0.4 1,560,236 - A4249_RS07795 0.55 -0.1 1,560,236 - A4249_RS07795 0.55 +0.5 1,560,236 - A4249_RS07795 0.55 -0.4 1,560,236 - A4249_RS07795 0.55 -0.9 1,560,236 - A4249_RS07795 0.55 -0.5 1,560,236 - A4249_RS07795 0.55 +0.2 1,560,236 - A4249_RS07795 0.55 +1.5 1,560,236 - A4249_RS07795 0.55 -0.1 1,560,236 - A4249_RS07795 0.55 -1.1 1,560,236 - A4249_RS07795 0.55 -0.4 1,560,236 - A4249_RS07795 0.55 +0.6 1,560,236 - A4249_RS07795 0.55 -1.6 1,560,236 - A4249_RS07795 0.55 +1.4 1,560,236 - A4249_RS07795 0.55 +1.2 1,560,318 + A4249_RS07795 0.66 -0.8 1,560,319 - A4249_RS07795 0.66 +0.1 1,560,319 - A4249_RS07795 0.66 +0.1 1,560,319 - A4249_RS07795 0.66 +0.7 1,560,319 - A4249_RS07795 0.66 +0.2 1,560,390 + A4249_RS07795 0.75 -0.4 1,560,390 + A4249_RS07795 0.75 -0.4 1,560,390 + A4249_RS07795 0.75 +0.4 1,560,391 - A4249_RS07795 0.76 +0.3 1,560,448 + A4249_RS07795 0.83 -1.4 1,560,448 + A4249_RS07795 0.83 +0.5 1,560,448 + A4249_RS07795 0.83 +0.1 1,560,449 - A4249_RS07795 0.83 +0.3 1,560,449 - A4249_RS07795 0.83 +0.4 1,560,449 - A4249_RS07795 0.83 -0.5 1,560,449 - A4249_RS07795 0.83 +1.2 1,560,715 + +0.0 1,560,715 + +0.0 1,560,715 + -0.3 1,560,715 + +0.2 1,560,715 + -0.5 1,560,716 - +1.5 1,560,716 - +0.3 1,560,716 - +0.1 1,560,716 - -0.5 1,560,716 - -0.2 1,560,813 + +0.2 1,560,813 + +0.4 1,560,813 + -0.2 1,560,813 + -1.2 1,560,813 + +1.7 1,560,814 - +0.5 1,560,814 - -0.7 1,560,814 - -0.2 1,560,814 - -0.8 1,560,814 - +0.2 1,560,814 - -0.1 1,560,814 - -0.7 1,560,864 + A4249_RS07800 0.10 +0.5 1,560,864 + A4249_RS07800 0.10 -0.9 1,560,864 + A4249_RS07800 0.10 -0.7 1,560,864 + A4249_RS07800 0.10 -0.8 1,560,865 - A4249_RS07800 0.10 +0.6 1,560,865 - A4249_RS07800 0.10 -0.8 1,560,865 - A4249_RS07800 0.10 -0.1 1,560,865 - A4249_RS07800 0.10 +1.9 1,561,026 + A4249_RS07800 0.24 -1.2 1,561,026 + A4249_RS07800 0.24 -0.2 1,561,026 + A4249_RS07800 0.24 +0.0 1,561,026 + A4249_RS07800 0.24 -1.2 1,561,027 - A4249_RS07800 0.25 -0.4 1,561,027 - A4249_RS07800 0.25 +0.0 1,561,027 - A4249_RS07800 0.25 +0.5 1,561,027 - A4249_RS07800 0.25 -0.8 1,561,027 - A4249_RS07800 0.25 -0.1 1,561,027 - A4249_RS07800 0.25 +1.0 1,561,027 - A4249_RS07800 0.25 -0.2 1,561,027 - A4249_RS07800 0.25 +0.9 1,561,104 - A4249_RS07800 0.31 +0.6 1,561,104 - A4249_RS07800 0.31 +0.7 1,561,104 - A4249_RS07800 0.31 -0.4 1,561,236 + A4249_RS07800 0.43 -0.7 1,561,357 + A4249_RS07800 0.54 +0.6 1,561,357 + A4249_RS07800 0.54 -1.1 1,561,357 + A4249_RS07800 0.54 -0.7 1,561,357 + A4249_RS07800 0.54 -0.5 1,561,357 + A4249_RS07800 0.54 -0.3 1,561,358 - A4249_RS07800 0.54 -0.4 1,561,358 - A4249_RS07800 0.54 -2.3 1,561,358 - A4249_RS07800 0.54 +0.4 1,561,358 - A4249_RS07800 0.54 -0.1 1,561,358 - A4249_RS07800 0.54 +0.1 1,561,358 - A4249_RS07800 0.54 +0.1
Or see this region's nucleotide sequence