Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07370

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07365 and A4249_RS07370 are separated by 43 nucleotidesA4249_RS07370 and A4249_RS07375 are separated by 29 nucleotidesA4249_RS07375 and A4249_RS07380 are separated by 99 nucleotides A4249_RS07365: A4249_RS07365 - lysozyme, at 1,468,659 to 1,469,813 _RS07365 A4249_RS07370: A4249_RS07370 - isovaleryl-CoA dehydrogenase, at 1,469,857 to 1,471,026 _RS07370 A4249_RS07375: A4249_RS07375 - DUF3008 family protein, at 1,471,056 to 1,471,241 _RS07375 A4249_RS07380: A4249_RS07380 - exopolysaccharide biosynthesis protein, at 1,471,341 to 1,472,105 _RS07380 Position (kb) 1469 1470 1471 1472Strain fitness (log2 ratio) -2 -1 0 1 2at 1468.941 kb on + strand, within A4249_RS07365at 1469.118 kb on - strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.644 kb on + strand, within A4249_RS07365at 1469.772 kb on + strandat 1469.772 kb on + strandat 1469.782 kb on - strandat 1469.844 kb on + strandat 1469.844 kb on + strandat 1469.844 kb on + strandat 1469.844 kb on + strandat 1469.845 kb on - strandat 1470.143 kb on - strand, within A4249_RS07370at 1470.168 kb on + strand, within A4249_RS07370at 1470.211 kb on + strand, within A4249_RS07370at 1470.211 kb on + strand, within A4249_RS07370at 1470.211 kb on + strand, within A4249_RS07370at 1470.211 kb on + strand, within A4249_RS07370at 1470.212 kb on - strand, within A4249_RS07370at 1470.212 kb on - strand, within A4249_RS07370at 1470.212 kb on - strand, within A4249_RS07370at 1470.212 kb on - strand, within A4249_RS07370at 1470.212 kb on - strand, within A4249_RS07370at 1470.212 kb on - strand, within A4249_RS07370at 1470.325 kb on + strand, within A4249_RS07370at 1470.325 kb on + strand, within A4249_RS07370at 1470.325 kb on + strand, within A4249_RS07370at 1470.326 kb on - strand, within A4249_RS07370at 1470.326 kb on - strand, within A4249_RS07370at 1470.326 kb on - strand, within A4249_RS07370at 1470.326 kb on - strand, within A4249_RS07370at 1470.326 kb on - strand, within A4249_RS07370at 1470.326 kb on - strand, within A4249_RS07370at 1470.388 kb on + strand, within A4249_RS07370at 1470.388 kb on + strand, within A4249_RS07370at 1470.388 kb on + strand, within A4249_RS07370at 1470.389 kb on - strand, within A4249_RS07370at 1470.389 kb on - strand, within A4249_RS07370at 1470.604 kb on + strand, within A4249_RS07370at 1470.604 kb on + strand, within A4249_RS07370at 1470.604 kb on + strand, within A4249_RS07370at 1470.605 kb on - strand, within A4249_RS07370at 1470.673 kb on + strand, within A4249_RS07370at 1470.673 kb on + strand, within A4249_RS07370at 1470.674 kb on - strand, within A4249_RS07370at 1470.674 kb on - strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.748 kb on + strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.749 kb on - strand, within A4249_RS07370at 1470.775 kb on + strand, within A4249_RS07370at 1470.775 kb on + strand, within A4249_RS07370at 1470.775 kb on + strand, within A4249_RS07370at 1470.776 kb on - strand, within A4249_RS07370at 1470.776 kb on - strand, within A4249_RS07370at 1470.776 kb on - strand, within A4249_RS07370at 1470.781 kb on + strand, within A4249_RS07370at 1470.781 kb on + strand, within A4249_RS07370at 1470.781 kb on + strand, within A4249_RS07370at 1470.782 kb on - strand, within A4249_RS07370at 1470.782 kb on - strand, within A4249_RS07370at 1470.824 kb on - strand, within A4249_RS07370at 1470.910 kb on + strandat 1470.910 kb on + strandat 1470.958 kb on + strandat 1470.958 kb on + strandat 1470.958 kb on + strandat 1470.958 kb on + strandat 1470.959 kb on - strandat 1470.959 kb on - strandat 1470.959 kb on - strandat 1470.959 kb on - strandat 1471.255 kb on + strandat 1471.255 kb on + strandat 1471.256 kb on - strandat 1471.256 kb on - strandat 1471.256 kb on - strandat 1471.278 kb on + strandat 1471.278 kb on + strandat 1471.279 kb on - strandat 1471.279 kb on - strandat 1471.279 kb on - strandat 1471.279 kb on - strandat 1471.279 kb on - strandat 1471.305 kb on + strandat 1471.305 kb on + strandat 1471.305 kb on + strandat 1471.305 kb on + strandat 1471.305 kb on + strandat 1471.306 kb on - strandat 1471.306 kb on - strandat 1471.306 kb on - strandat 1471.306 kb on - strandat 1471.306 kb on - strandat 1471.728 kb on + strand, within A4249_RS07380at 1471.729 kb on - strand, within A4249_RS07380at 1471.729 kb on - strand, within A4249_RS07380

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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1,468,941 + A4249_RS07365 0.24 +0.6
1,469,118 - A4249_RS07365 0.40 +0.8
1,469,292 + A4249_RS07365 0.55 +0.0
1,469,292 + A4249_RS07365 0.55 +0.2
1,469,292 + A4249_RS07365 0.55 +0.9
1,469,292 + A4249_RS07365 0.55 -0.8
1,469,292 + A4249_RS07365 0.55 -0.5
1,469,292 + A4249_RS07365 0.55 -0.4
1,469,292 + A4249_RS07365 0.55 -0.3
1,469,292 + A4249_RS07365 0.55 -0.1
1,469,293 - A4249_RS07365 0.55 -0.4
1,469,293 - A4249_RS07365 0.55 +0.2
1,469,293 - A4249_RS07365 0.55 +0.2
1,469,293 - A4249_RS07365 0.55 +0.8
1,469,293 - A4249_RS07365 0.55 -0.2
1,469,293 - A4249_RS07365 0.55 -0.1
1,469,293 - A4249_RS07365 0.55 +0.3
1,469,293 - A4249_RS07365 0.55 -1.1
1,469,293 - A4249_RS07365 0.55 -0.9
1,469,293 - A4249_RS07365 0.55 +0.1
1,469,293 - A4249_RS07365 0.55 +0.1
1,469,293 - A4249_RS07365 0.55 +1.1
1,469,293 - A4249_RS07365 0.55 -0.2
1,469,293 - A4249_RS07365 0.55 +0.9
1,469,293 - A4249_RS07365 0.55 +0.2
1,469,644 + A4249_RS07365 0.85 -0.5
1,469,772 + -0.2
1,469,772 + +0.4
1,469,782 - +0.2
1,469,844 + +0.4
1,469,844 + -0.3
1,469,844 + +0.7
1,469,844 + -0.2
1,469,845 - -0.8
1,470,143 - A4249_RS07370 0.24 -0.2
1,470,168 + A4249_RS07370 0.27 +0.8
1,470,211 + A4249_RS07370 0.30 -0.4
1,470,211 + A4249_RS07370 0.30 +0.2
1,470,211 + A4249_RS07370 0.30 +0.1
1,470,211 + A4249_RS07370 0.30 -1.4
1,470,212 - A4249_RS07370 0.30 -0.4
1,470,212 - A4249_RS07370 0.30 +0.3
1,470,212 - A4249_RS07370 0.30 -0.1
1,470,212 - A4249_RS07370 0.30 -0.4
1,470,212 - A4249_RS07370 0.30 +0.5
1,470,212 - A4249_RS07370 0.30 -0.6
1,470,325 + A4249_RS07370 0.40 -0.1
1,470,325 + A4249_RS07370 0.40 +0.1
1,470,325 + A4249_RS07370 0.40 -0.4
1,470,326 - A4249_RS07370 0.40 -0.1
1,470,326 - A4249_RS07370 0.40 -0.2
1,470,326 - A4249_RS07370 0.40 -1.6
1,470,326 - A4249_RS07370 0.40 -0.1
1,470,326 - A4249_RS07370 0.40 +0.6
1,470,326 - A4249_RS07370 0.40 +0.2
1,470,388 + A4249_RS07370 0.45 -0.3
1,470,388 + A4249_RS07370 0.45 -0.7
1,470,388 + A4249_RS07370 0.45 -0.0
1,470,389 - A4249_RS07370 0.45 +0.3
1,470,389 - A4249_RS07370 0.45 -0.5
1,470,604 + A4249_RS07370 0.64 +0.0
1,470,604 + A4249_RS07370 0.64 -0.1
1,470,604 + A4249_RS07370 0.64 +1.1
1,470,605 - A4249_RS07370 0.64 +0.3
1,470,673 + A4249_RS07370 0.70 +0.0
1,470,673 + A4249_RS07370 0.70 -0.2
1,470,674 - A4249_RS07370 0.70 -0.1
1,470,674 - A4249_RS07370 0.70 -0.2
1,470,748 + A4249_RS07370 0.76 -0.3
1,470,748 + A4249_RS07370 0.76 -0.0
1,470,748 + A4249_RS07370 0.76 -0.5
1,470,748 + A4249_RS07370 0.76 -0.5
1,470,748 + A4249_RS07370 0.76 +0.5
1,470,748 + A4249_RS07370 0.76 -0.8
1,470,748 + A4249_RS07370 0.76 +0.0
1,470,748 + A4249_RS07370 0.76 +0.1
1,470,748 + A4249_RS07370 0.76 -0.5
1,470,748 + A4249_RS07370 0.76 +0.4
1,470,748 + A4249_RS07370 0.76 -0.3
1,470,748 + A4249_RS07370 0.76 -0.8
1,470,748 + A4249_RS07370 0.76 -0.3
1,470,748 + A4249_RS07370 0.76 -0.4
1,470,748 + A4249_RS07370 0.76 -0.9
1,470,748 + A4249_RS07370 0.76 -0.3
1,470,748 + A4249_RS07370 0.76 +0.3
1,470,748 + A4249_RS07370 0.76 -0.3
1,470,748 + A4249_RS07370 0.76 +0.1
1,470,748 + A4249_RS07370 0.76 -0.3
1,470,748 + A4249_RS07370 0.76 +0.6
1,470,748 + A4249_RS07370 0.76 -0.0
1,470,748 + A4249_RS07370 0.76 +0.9
1,470,749 - A4249_RS07370 0.76 -0.3
1,470,749 - A4249_RS07370 0.76 -0.0
1,470,749 - A4249_RS07370 0.76 +0.1
1,470,749 - A4249_RS07370 0.76 +0.1
1,470,749 - A4249_RS07370 0.76 +0.6
1,470,749 - A4249_RS07370 0.76 -1.9
1,470,749 - A4249_RS07370 0.76 -0.8
1,470,749 - A4249_RS07370 0.76 +0.2
1,470,749 - A4249_RS07370 0.76 +0.0
1,470,749 - A4249_RS07370 0.76 -0.0
1,470,749 - A4249_RS07370 0.76 -0.4
1,470,749 - A4249_RS07370 0.76 -0.1
1,470,749 - A4249_RS07370 0.76 -0.7
1,470,749 - A4249_RS07370 0.76 +0.8
1,470,749 - A4249_RS07370 0.76 -0.3
1,470,749 - A4249_RS07370 0.76 +0.2
1,470,749 - A4249_RS07370 0.76 +0.2
1,470,749 - A4249_RS07370 0.76 +0.1
1,470,749 - A4249_RS07370 0.76 +0.6
1,470,749 - A4249_RS07370 0.76 +0.1
1,470,749 - A4249_RS07370 0.76 +0.2
1,470,775 + A4249_RS07370 0.78 +0.2
1,470,775 + A4249_RS07370 0.78 -1.3
1,470,775 + A4249_RS07370 0.78 -0.8
1,470,776 - A4249_RS07370 0.79 -0.2
1,470,776 - A4249_RS07370 0.79 +0.9
1,470,776 - A4249_RS07370 0.79 -1.2
1,470,781 + A4249_RS07370 0.79 +0.3
1,470,781 + A4249_RS07370 0.79 -0.3
1,470,781 + A4249_RS07370 0.79 -0.1
1,470,782 - A4249_RS07370 0.79 -0.1
1,470,782 - A4249_RS07370 0.79 +0.6
1,470,824 - A4249_RS07370 0.83 +0.3
1,470,910 + -1.5
1,470,910 + +0.6
1,470,958 + -0.0
1,470,958 + -0.1
1,470,958 + +0.1
1,470,958 + -0.3
1,470,959 - -0.7
1,470,959 - -0.2
1,470,959 - +0.4
1,470,959 - +0.1
1,471,255 + -0.1
1,471,255 + +0.1
1,471,256 - -0.4
1,471,256 - -0.6
1,471,256 - -0.3
1,471,278 + -0.2
1,471,278 + -0.5
1,471,279 - +0.3
1,471,279 - -0.6
1,471,279 - +0.2
1,471,279 - -0.3
1,471,279 - -1.2
1,471,305 + +0.4
1,471,305 + -1.0
1,471,305 + -0.8
1,471,305 + +0.1
1,471,305 + +0.4
1,471,306 - -1.0
1,471,306 - +0.5
1,471,306 - +2.0
1,471,306 - +0.5
1,471,306 - +0.6
1,471,728 + A4249_RS07380 0.51 +0.7
1,471,729 - A4249_RS07380 0.51 +0.2
1,471,729 - A4249_RS07380 0.51 +0.0

Or see this region's nucleotide sequence