Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07100

Experiment: Xanthine 0.6574 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xanthine 0.6574 mM (C)
1,424,292	-		A4249_RS16785	0.27	+0.5
1,424,437	-		A4249_RS16785	0.37	+1.8
1,424,520	+		A4249_RS16785	0.43	-0.4
1,424,520	+		A4249_RS16785	0.43	-0.2
1,424,520	+		A4249_RS16785	0.43	-1.3
1,424,520	+		A4249_RS16785	0.43	-0.6
1,424,520	+		A4249_RS16785	0.43	-0.7
1,424,520	+		A4249_RS16785	0.43	+0.2
1,424,521	-		A4249_RS16785	0.44	-0.7
1,424,576	+		A4249_RS16785	0.48	-0.9
1,424,576	+		A4249_RS16785	0.48	-0.4
1,424,577	-		A4249_RS16785	0.48	-0.1
1,424,790	+		A4249_RS16785	0.63	+0.1
1,424,790	+		A4249_RS16785	0.63	+0.4
1,424,790	+		A4249_RS16785	0.63	-1.0
1,424,791	-		A4249_RS16785	0.63	-0.8
1,424,791	-		A4249_RS16785	0.63	-0.1
1,424,791	-		A4249_RS16785	0.63	+1.0
1,424,791	-		A4249_RS16785	0.63	-0.1
1,424,827	+		A4249_RS16785	0.66	+0.3
1,424,924	+		A4249_RS16785	0.73	+1.8
1,424,949	+		A4249_RS16785	0.75	-0.7
1,424,949	+		A4249_RS16785	0.75	-0.2
1,424,949	+		A4249_RS16785	0.75	-1.4
1,424,949	+		A4249_RS16785	0.75	-0.6
1,424,950	-		A4249_RS16785	0.75	-1.0
1,424,950	-		A4249_RS16785	0.75	-0.7
1,424,950	-		A4249_RS16785	0.75	+0.5
1,424,950	-		A4249_RS16785	0.75	-0.9
1,424,950	-		A4249_RS16785	0.75	+0.2
1,424,950	-		A4249_RS16785	0.75	-0.4
1,424,950	-		A4249_RS16785	0.75	+0.1
1,425,026	+		A4249_RS16785	0.81	+0.7
1,425,027	-		A4249_RS16785	0.81	+0.4
1,425,027	-		A4249_RS16785	0.81	-0.6
1,425,027	-		A4249_RS16785	0.81	+1.0
1,425,027	-		A4249_RS16785	0.81	+0.0
1,425,033	+		A4249_RS16785	0.81	+0.0
1,425,033	+		A4249_RS16785	0.81	+0.5
1,425,033	+		A4249_RS16785	0.81	+0.6
1,425,033	+		A4249_RS16785	0.81	+0.3
1,425,033	+		A4249_RS16785	0.81	-0.8
1,425,034	-		A4249_RS16785	0.81	+0.2
1,425,034	-		A4249_RS16785	0.81	-0.7
1,425,034	-		A4249_RS16785	0.81	+0.5
1,425,034	-		A4249_RS16785	0.81	-1.0
1,425,034	-		A4249_RS16785	0.81	-0.1
1,425,034	-		A4249_RS16785	0.81	+0.5
1,425,087	+		A4249_RS16785	0.85	+0.1
1,425,087	+		A4249_RS16785	0.85	-0.8
1,425,088	-		A4249_RS16785	0.85	-0.9
1,425,172	-				-0.4
1,425,380	+				-1.3
1,425,380	+				+1.2
1,425,380	+				+0.1
1,425,380	+				-0.9
1,425,381	-				+0.0
1,425,383	+				-0.6
1,425,383	+				+0.9
1,425,383	+				-0.8
1,425,384	-				-0.9
1,425,384	-				-0.1
1,425,384	-				-0.2
1,425,408	+				+0.2
1,425,409	-				+1.4
1,425,521	+		A4249_RS07100	0.14	+0.2
1,425,522	-		A4249_RS07100	0.14	+0.2
1,425,522	-		A4249_RS07100	0.14	+0.5
1,425,578	+		A4249_RS07100	0.17	+0.3
1,425,578	+		A4249_RS07100	0.17	-0.6
1,425,579	-		A4249_RS07100	0.17	+0.7
1,425,579	-		A4249_RS07100	0.17	-0.2
1,425,579	-		A4249_RS07100	0.17	-1.5
1,425,579	-		A4249_RS07100	0.17	-0.1
1,425,579	-		A4249_RS07100	0.17	-0.1
1,425,579	-		A4249_RS07100	0.17	-0.2
1,425,682	-		A4249_RS07100	0.23	-1.0
1,425,682	-		A4249_RS07100	0.23	-0.3
1,425,708	-		A4249_RS07100	0.24	-0.5
1,425,722	+		A4249_RS07100	0.25	+0.4
1,425,722	+		A4249_RS07100	0.25	+0.6
1,425,722	+		A4249_RS07100	0.25	-1.8
1,425,722	+		A4249_RS07100	0.25	-0.4
1,425,722	+		A4249_RS07100	0.25	-0.2
1,425,722	+		A4249_RS07100	0.25	-1.0
1,425,723	-		A4249_RS07100	0.25	-1.5
1,425,723	-		A4249_RS07100	0.25	-0.3
1,425,723	-		A4249_RS07100	0.25	-0.4
1,425,731	+		A4249_RS07100	0.25	-0.6
1,425,731	+		A4249_RS07100	0.25	-0.5
1,425,732	-		A4249_RS07100	0.25	-0.7
1,425,732	-		A4249_RS07100	0.25	+0.4
1,425,764	+		A4249_RS07100	0.27	+0.6
1,425,764	+		A4249_RS07100	0.27	-0.1
1,425,764	+		A4249_RS07100	0.27	-0.0
1,425,764	+		A4249_RS07100	0.27	-0.5
1,425,764	+		A4249_RS07100	0.27	-1.4
1,425,764	+		A4249_RS07100	0.27	+0.2
1,425,764	+		A4249_RS07100	0.27	-1.5
1,425,764	+		A4249_RS07100	0.27	-0.1
1,425,764	+		A4249_RS07100	0.27	-0.2
1,425,764	+		A4249_RS07100	0.27	-1.1
1,425,764	+		A4249_RS07100	0.27	+0.0
1,425,764	+		A4249_RS07100	0.27	-1.7
1,425,764	+		A4249_RS07100	0.27	+0.6
1,425,764	+		A4249_RS07100	0.27	+1.0
1,425,765	-		A4249_RS07100	0.27	-0.5
1,425,765	-		A4249_RS07100	0.27	+1.1
1,425,765	-		A4249_RS07100	0.27	-0.5
1,425,765	-		A4249_RS07100	0.27	+0.8
1,425,765	-		A4249_RS07100	0.27	+0.2
1,425,765	-		A4249_RS07100	0.27	-0.7
1,425,765	-		A4249_RS07100	0.27	-0.4
1,425,765	-		A4249_RS07100	0.27	-0.7
1,425,765	-		A4249_RS07100	0.27	+0.8
1,425,765	-		A4249_RS07100	0.27	-0.2
1,425,765	-		A4249_RS07100	0.27	+0.1
1,425,765	-		A4249_RS07100	0.27	-0.6
1,425,765	-		A4249_RS07100	0.27	+1.2
1,425,765	-		A4249_RS07100	0.27	+0.4
1,425,765	-		A4249_RS07100	0.27	-1.0
1,425,788	+		A4249_RS07100	0.28	+0.7
1,425,788	+		A4249_RS07100	0.28	-0.5
1,425,789	-		A4249_RS07100	0.29	-1.8
1,425,789	-		A4249_RS07100	0.29	-0.6
1,425,789	-		A4249_RS07100	0.29	-0.3
1,425,847	-		A4249_RS07100	0.32	+1.0
1,425,847	-		A4249_RS07100	0.32	+0.6
1,425,950	+		A4249_RS07100	0.37	+0.7
1,425,950	+		A4249_RS07100	0.37	-0.3
1,425,950	+		A4249_RS07100	0.37	+1.0
1,425,951	-		A4249_RS07100	0.37	-0.2
1,425,951	-		A4249_RS07100	0.37	-0.5
1,425,951	-		A4249_RS07100	0.37	+0.3
1,425,984	+		A4249_RS07100	0.39	-1.1
1,425,984	+		A4249_RS07100	0.39	+0.4
1,425,984	+		A4249_RS07100	0.39	-1.3
1,425,984	+		A4249_RS07100	0.39	+0.4
1,425,985	-		A4249_RS07100	0.39	+0.2
1,425,985	-		A4249_RS07100	0.39	-0.1
1,426,025	+		A4249_RS07100	0.42	-0.1
1,426,026	-		A4249_RS07100	0.42	-0.7
1,426,076	+		A4249_RS07100	0.44	-1.0
1,426,076	+		A4249_RS07100	0.44	+0.5
1,426,077	-		A4249_RS07100	0.44	-0.2
1,426,077	-		A4249_RS07100	0.44	-0.5
1,426,100	+		A4249_RS07100	0.46	+0.0
1,426,148	+		A4249_RS07100	0.48	-0.4
1,426,148	+		A4249_RS07100	0.48	-0.7
1,426,149	-		A4249_RS07100	0.48	-0.1
1,426,149	-		A4249_RS07100	0.48	-0.3
1,426,149	-		A4249_RS07100	0.48	-1.3
1,426,149	-		A4249_RS07100	0.48	-0.5
1,426,282	+		A4249_RS07100	0.56	-0.0
1,426,283	-		A4249_RS07100	0.56	-1.2
1,426,283	-		A4249_RS07100	0.56	+0.6
1,426,576	+		A4249_RS07100	0.72	+0.8
1,426,576	+		A4249_RS07100	0.72	-0.3
1,426,598	+		A4249_RS07100	0.73	-1.7
1,426,598	+		A4249_RS07100	0.73	+0.1
1,426,598	+		A4249_RS07100	0.73	+0.4
1,426,599	-		A4249_RS07100	0.73	-0.1
1,426,599	-		A4249_RS07100	0.73	+0.5
1,426,599	-		A4249_RS07100	0.73	-1.4
1,426,599	-		A4249_RS07100	0.73	-1.5
1,426,599	-		A4249_RS07100	0.73	-0.9
1,426,599	-		A4249_RS07100	0.73	+0.3
1,426,599	-		A4249_RS07100	0.73	+0.5
1,426,646	+		A4249_RS07100	0.76	-0.4
1,426,646	+		A4249_RS07100	0.76	-0.1
1,426,646	+		A4249_RS07100	0.76	-0.4
1,426,646	+		A4249_RS07100	0.76	-0.7
1,426,646	+		A4249_RS07100	0.76	+1.2
1,426,646	+		A4249_RS07100	0.76	-0.5
1,426,646	+		A4249_RS07100	0.76	-1.4
1,426,801	+		A4249_RS07100	0.84	-1.0
1,426,801	+		A4249_RS07100	0.84	-0.4
1,426,801	+		A4249_RS07100	0.84	+0.2
1,426,805	+		A4249_RS07100	0.85	+0.4
1,426,805	+		A4249_RS07100	0.85	-1.6
1,426,805	+		A4249_RS07100	0.85	+0.2
1,426,805	+		A4249_RS07100	0.85	-2.8
1,426,805	+		A4249_RS07100	0.85	-1.0
1,426,805	+		A4249_RS07100	0.85	+1.0
1,426,805	+		A4249_RS07100	0.85	+0.4
1,426,805	+		A4249_RS07100	0.85	-0.0
1,426,805	+		A4249_RS07100	0.85	-1.2
1,426,805	+		A4249_RS07100	0.85	+0.4
1,426,805	+		A4249_RS07100	0.85	-1.5
1,426,805	+		A4249_RS07100	0.85	-1.0
1,426,805	+		A4249_RS07100	0.85	-0.7
1,426,805	+		A4249_RS07100	0.85	-2.1
1,426,806	-		A4249_RS07100	0.85	+0.4
1,426,806	-		A4249_RS07100	0.85	+0.5
1,426,806	-		A4249_RS07100	0.85	+1.2
1,426,806	-		A4249_RS07100	0.85	-0.9
1,426,806	-		A4249_RS07100	0.85	+0.5
1,426,806	-		A4249_RS07100	0.85	-0.6
1,426,806	-		A4249_RS07100	0.85	-0.4
1,426,806	-		A4249_RS07100	0.85	+0.6
1,426,806	-		A4249_RS07100	0.85	+0.3
1,426,806	-		A4249_RS07100	0.85	-1.1
1,426,806	-		A4249_RS07100	0.85	-0.8
1,426,806	-		A4249_RS07100	0.85	-0.9
1,426,806	-		A4249_RS07100	0.85	-1.1
1,426,806	-		A4249_RS07100	0.85	-0.2
1,427,079	-				-0.9
1,427,095	+				-0.8
1,427,159	+				-1.9
1,427,160	-				-0.6
1,427,160	-				-1.5
1,427,160	-				-0.4
1,427,620	+		A4249_RS07105	0.57	-0.8
1,427,621	-		A4249_RS07105	0.57	-0.8
1,427,621	-		A4249_RS07105	0.57	-0.7
1,427,941	+				-0.7
1,427,942	-				+0.6
1,427,959	+				-1.0
1,427,959	+				+0.3
1,427,960	-				-0.7
1,427,960	-				-0.2
1,428,007	+				-2.2
1,428,007	+				-0.8
1,428,007	+				+0.6
1,428,008	-				-0.7
1,428,008	-				+0.8
1,428,019	+				+1.1
1,428,019	+				-2.4
1,428,020	-				-0.6
1,428,020	-				-0.1
1,428,020	-				-0.4
1,428,020	-				-0.1
1,428,037	+				+0.6
1,428,046	+				-0.7
1,428,046	+				-0.3
1,428,046	+				-0.2
1,428,046	+				+0.2
1,428,046	+				-0.4
1,428,046	+				-1.0
1,428,046	+				-0.8
1,428,047	-				+0.2
1,428,047	-				-1.4
1,428,047	-				-1.0
1,428,047	-				+0.8
1,428,047	-				+0.3