Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04555 and A4249_RS04560 are separated by 85 nucleotides A4249_RS04560 and A4249_RS04565 are separated by 158 nucleotides A4249_RS04565 and A4249_RS04570 overlap by 4 nucleotides
A4249_RS04555: A4249_RS04555 - transporter, at 945,593 to 946,405
_RS04555
A4249_RS04560: A4249_RS04560 - alpha/beta hydrolase, at 946,491 to 947,141
_RS04560
A4249_RS04565: A4249_RS04565 - Rrf2 family transcriptional regulator, at 947,300 to 947,779
_RS04565
A4249_RS04570: A4249_RS04570 - cysteine desulfurase family protein, at 947,776 to 948,915
_RS04570
Position (kb) 947
948 Strain fitness (log2 ratio) -2
-1
0
1 at 946.477 kb on + strand at 947.184 kb on - strand at 947.256 kb on + strand at 947.256 kb on + strand at 947.257 kb on - strand at 947.257 kb on - strand at 947.435 kb on + strand, within A4249_RS04565 at 947.435 kb on + strand, within A4249_RS04565 at 947.435 kb on + strand, within A4249_RS04565 at 947.435 kb on + strand, within A4249_RS04565 at 947.435 kb on + strand, within A4249_RS04565 at 947.684 kb on + strand, within A4249_RS04565 at 947.684 kb on + strand, within A4249_RS04565
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 946,477 + -0.8 947,184 - -0.1 947,256 + +1.0 947,256 + +0.7 947,257 - +0.2 947,257 - -0.0 947,435 + A4249_RS04565 0.28 -0.6 947,435 + A4249_RS04565 0.28 -0.9 947,435 + A4249_RS04565 0.28 -0.4 947,435 + A4249_RS04565 0.28 +0.3 947,435 + A4249_RS04565 0.28 +0.0 947,684 + A4249_RS04565 0.80 -1.9 947,684 + A4249_RS04565 0.80 -1.5
Or see this region's nucleotide sequence