Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02955

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02945 and A4249_RS02950 are separated by 95 nucleotidesA4249_RS02950 and A4249_RS02955 overlap by 14 nucleotidesA4249_RS02955 and A4249_RS02960 are separated by 2 nucleotides A4249_RS02945: A4249_RS02945 - hypothetical protein, at 625,338 to 626,105 _RS02945 A4249_RS02950: A4249_RS02950 - hypothetical protein, at 626,201 to 626,788 _RS02950 A4249_RS02955: A4249_RS02955 - 3-oxoacid CoA-transferase subunit B, at 626,775 to 627,431 _RS02955 A4249_RS02960: A4249_RS02960 - CoA transferase subunit A, at 627,434 to 628,159 _RS02960 Position (kb) 626 627 628Strain fitness (log2 ratio) -2 -1 0 1 2at 626.096 kb on - strandat 626.103 kb on + strandat 626.103 kb on + strandat 626.104 kb on - strandat 626.104 kb on - strandat 626.104 kb on - strandat 626.104 kb on - strandat 626.141 kb on + strandat 626.223 kb on + strandat 626.224 kb on - strandat 626.224 kb on - strandat 626.343 kb on + strand, within A4249_RS02950at 626.384 kb on + strand, within A4249_RS02950at 626.384 kb on + strand, within A4249_RS02950at 626.384 kb on + strand, within A4249_RS02950at 626.384 kb on + strand, within A4249_RS02950at 626.384 kb on + strand, within A4249_RS02950at 626.385 kb on - strand, within A4249_RS02950at 626.385 kb on - strand, within A4249_RS02950at 626.385 kb on - strand, within A4249_RS02950at 626.536 kb on + strand, within A4249_RS02950at 626.536 kb on + strand, within A4249_RS02950at 626.537 kb on - strand, within A4249_RS02950at 626.558 kb on + strand, within A4249_RS02950at 626.558 kb on + strand, within A4249_RS02950at 626.558 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.579 kb on + strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.580 kb on - strand, within A4249_RS02950at 626.648 kb on + strand, within A4249_RS02950at 626.648 kb on + strand, within A4249_RS02950at 626.648 kb on + strand, within A4249_RS02950at 626.648 kb on + strand, within A4249_RS02950at 626.649 kb on - strand, within A4249_RS02950at 626.649 kb on - strand, within A4249_RS02950at 626.649 kb on - strand, within A4249_RS02950at 626.683 kb on - strand, within A4249_RS02950at 626.683 kb on - strand, within A4249_RS02950at 626.806 kb on + strandat 626.806 kb on + strandat 626.806 kb on + strandat 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.957 kb on + strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 626.958 kb on - strand, within A4249_RS02955at 627.143 kb on + strand, within A4249_RS02955at 627.144 kb on - strand, within A4249_RS02955at 627.144 kb on - strand, within A4249_RS02955at 627.144 kb on - strand, within A4249_RS02955at 627.144 kb on - strand, within A4249_RS02955at 627.187 kb on + strand, within A4249_RS02955at 627.187 kb on + strand, within A4249_RS02955at 627.187 kb on + strand, within A4249_RS02955at 627.187 kb on + strand, within A4249_RS02955at 627.187 kb on + strand, within A4249_RS02955at 627.188 kb on - strand, within A4249_RS02955at 627.188 kb on - strand, within A4249_RS02955at 627.188 kb on - strand, within A4249_RS02955at 627.188 kb on - strand, within A4249_RS02955at 627.188 kb on - strand, within A4249_RS02955at 627.259 kb on + strand, within A4249_RS02955at 627.259 kb on + strand, within A4249_RS02955at 627.259 kb on + strand, within A4249_RS02955at 627.259 kb on + strand, within A4249_RS02955at 627.260 kb on - strand, within A4249_RS02955at 627.328 kb on + strand, within A4249_RS02955at 627.328 kb on + strand, within A4249_RS02955at 627.328 kb on + strand, within A4249_RS02955at 627.328 kb on + strand, within A4249_RS02955at 627.328 kb on + strand, within A4249_RS02955at 627.328 kb on + strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.329 kb on - strand, within A4249_RS02955at 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.370 kb on + strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.371 kb on - strandat 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.531 kb on + strand, within A4249_RS02960at 627.532 kb on - strand, within A4249_RS02960at 627.532 kb on - strand, within A4249_RS02960at 627.532 kb on - strand, within A4249_RS02960at 627.532 kb on - strand, within A4249_RS02960at 627.532 kb on - strand, within A4249_RS02960at 627.532 kb on - strand, within A4249_RS02960at 627.735 kb on + strand, within A4249_RS02960at 627.735 kb on + strand, within A4249_RS02960at 627.735 kb on + strand, within A4249_RS02960at 627.736 kb on - strand, within A4249_RS02960at 627.736 kb on - strand, within A4249_RS02960at 627.736 kb on - strand, within A4249_RS02960at 627.736 kb on - strand, within A4249_RS02960at 627.736 kb on - strand, within A4249_RS02960at 627.736 kb on - strand, within A4249_RS02960at 627.894 kb on + strand, within A4249_RS02960at 627.894 kb on + strand, within A4249_RS02960at 627.894 kb on + strand, within A4249_RS02960at 627.894 kb on + strand, within A4249_RS02960at 627.895 kb on - strand, within A4249_RS02960at 627.895 kb on - strand, within A4249_RS02960at 627.927 kb on + strand, within A4249_RS02960at 627.927 kb on + strand, within A4249_RS02960at 627.928 kb on - strand, within A4249_RS02960at 627.928 kb on - strand, within A4249_RS02960at 627.928 kb on - strand, within A4249_RS02960at 627.928 kb on - strand, within A4249_RS02960at 628.146 kb on + strandat 628.146 kb on + strandat 628.146 kb on + strandat 628.147 kb on - strandat 628.147 kb on - strandat 628.147 kb on - strandat 628.147 kb on - strandat 628.290 kb on + strandat 628.290 kb on + strandat 628.290 kb on + strandat 628.290 kb on + strandat 628.291 kb on - strandat 628.291 kb on - strandat 628.291 kb on - strandat 628.291 kb on - strandat 628.331 kb on + strandat 628.332 kb on - strandat 628.332 kb on - strandat 628.332 kb on - strandat 628.332 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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626,096 - -0.2
626,103 + -0.5
626,103 + -0.4
626,104 - -0.2
626,104 - -0.3
626,104 - +0.5
626,104 - +0.1
626,141 + -0.6
626,223 + +1.3
626,224 - +1.0
626,224 - -0.5
626,343 + A4249_RS02950 0.24 +0.7
626,384 + A4249_RS02950 0.31 -1.0
626,384 + A4249_RS02950 0.31 +0.3
626,384 + A4249_RS02950 0.31 +0.5
626,384 + A4249_RS02950 0.31 -1.0
626,384 + A4249_RS02950 0.31 +0.3
626,385 - A4249_RS02950 0.31 -0.6
626,385 - A4249_RS02950 0.31 +1.0
626,385 - A4249_RS02950 0.31 -0.0
626,536 + A4249_RS02950 0.57 -1.0
626,536 + A4249_RS02950 0.57 +0.2
626,537 - A4249_RS02950 0.57 -0.0
626,558 + A4249_RS02950 0.61 -0.5
626,558 + A4249_RS02950 0.61 +1.1
626,558 + A4249_RS02950 0.61 -0.7
626,579 + A4249_RS02950 0.64 -0.3
626,579 + A4249_RS02950 0.64 +0.1
626,579 + A4249_RS02950 0.64 +0.6
626,579 + A4249_RS02950 0.64 -0.4
626,579 + A4249_RS02950 0.64 -0.6
626,579 + A4249_RS02950 0.64 -1.0
626,579 + A4249_RS02950 0.64 -0.3
626,579 + A4249_RS02950 0.64 +0.0
626,579 + A4249_RS02950 0.64 +0.3
626,579 + A4249_RS02950 0.64 -1.5
626,579 + A4249_RS02950 0.64 -1.0
626,579 + A4249_RS02950 0.64 +1.9
626,579 + A4249_RS02950 0.64 -0.0
626,579 + A4249_RS02950 0.64 +0.6
626,579 + A4249_RS02950 0.64 -0.0
626,579 + A4249_RS02950 0.64 -0.3
626,579 + A4249_RS02950 0.64 -0.4
626,579 + A4249_RS02950 0.64 -0.3
626,580 - A4249_RS02950 0.64 -0.3
626,580 - A4249_RS02950 0.64 -0.4
626,580 - A4249_RS02950 0.64 -0.5
626,580 - A4249_RS02950 0.64 -0.2
626,580 - A4249_RS02950 0.64 +0.1
626,580 - A4249_RS02950 0.64 +0.1
626,580 - A4249_RS02950 0.64 -0.0
626,580 - A4249_RS02950 0.64 -0.2
626,580 - A4249_RS02950 0.64 -0.5
626,580 - A4249_RS02950 0.64 +0.5
626,580 - A4249_RS02950 0.64 +0.1
626,580 - A4249_RS02950 0.64 -0.5
626,648 + A4249_RS02950 0.76 -0.1
626,648 + A4249_RS02950 0.76 -0.5
626,648 + A4249_RS02950 0.76 -0.4
626,648 + A4249_RS02950 0.76 -0.1
626,649 - A4249_RS02950 0.76 +0.6
626,649 - A4249_RS02950 0.76 +0.8
626,649 - A4249_RS02950 0.76 -0.7
626,683 - A4249_RS02950 0.82 +0.4
626,683 - A4249_RS02950 0.82 -0.1
626,806 + +0.2
626,806 + -0.4
626,806 + -0.5
626,957 + A4249_RS02955 0.28 +1.3
626,957 + A4249_RS02955 0.28 -0.9
626,957 + A4249_RS02955 0.28 +0.2
626,957 + A4249_RS02955 0.28 -0.0
626,957 + A4249_RS02955 0.28 -0.8
626,957 + A4249_RS02955 0.28 -0.3
626,957 + A4249_RS02955 0.28 +0.8
626,957 + A4249_RS02955 0.28 -0.1
626,957 + A4249_RS02955 0.28 -0.4
626,957 + A4249_RS02955 0.28 -1.8
626,957 + A4249_RS02955 0.28 -1.7
626,957 + A4249_RS02955 0.28 +0.6
626,958 - A4249_RS02955 0.28 -0.2
626,958 - A4249_RS02955 0.28 +0.2
626,958 - A4249_RS02955 0.28 -0.7
626,958 - A4249_RS02955 0.28 -0.4
626,958 - A4249_RS02955 0.28 -0.4
626,958 - A4249_RS02955 0.28 +0.1
626,958 - A4249_RS02955 0.28 -0.6
626,958 - A4249_RS02955 0.28 +0.2
626,958 - A4249_RS02955 0.28 +0.1
626,958 - A4249_RS02955 0.28 +0.7
626,958 - A4249_RS02955 0.28 -0.1
626,958 - A4249_RS02955 0.28 -0.2
627,143 + A4249_RS02955 0.56 -0.3
627,144 - A4249_RS02955 0.56 +0.5
627,144 - A4249_RS02955 0.56 +0.6
627,144 - A4249_RS02955 0.56 +0.1
627,144 - A4249_RS02955 0.56 -0.1
627,187 + A4249_RS02955 0.63 +0.3
627,187 + A4249_RS02955 0.63 +0.5
627,187 + A4249_RS02955 0.63 -0.3
627,187 + A4249_RS02955 0.63 -0.8
627,187 + A4249_RS02955 0.63 +0.9
627,188 - A4249_RS02955 0.63 -0.1
627,188 - A4249_RS02955 0.63 -0.1
627,188 - A4249_RS02955 0.63 -0.0
627,188 - A4249_RS02955 0.63 -0.1
627,188 - A4249_RS02955 0.63 +0.0
627,259 + A4249_RS02955 0.74 +0.2
627,259 + A4249_RS02955 0.74 +0.6
627,259 + A4249_RS02955 0.74 -0.2
627,259 + A4249_RS02955 0.74 +0.4
627,260 - A4249_RS02955 0.74 +0.1
627,328 + A4249_RS02955 0.84 -0.2
627,328 + A4249_RS02955 0.84 +1.4
627,328 + A4249_RS02955 0.84 -0.6
627,328 + A4249_RS02955 0.84 +0.2
627,328 + A4249_RS02955 0.84 -0.2
627,328 + A4249_RS02955 0.84 +0.6
627,329 - A4249_RS02955 0.84 +1.0
627,329 - A4249_RS02955 0.84 +0.3
627,329 - A4249_RS02955 0.84 -0.3
627,329 - A4249_RS02955 0.84 +0.2
627,329 - A4249_RS02955 0.84 -0.2
627,329 - A4249_RS02955 0.84 -0.8
627,329 - A4249_RS02955 0.84 -0.2
627,370 + -0.5
627,370 + -0.1
627,370 + +0.1
627,370 + -1.8
627,370 + -0.1
627,370 + -0.2
627,370 + +0.1
627,370 + +0.2
627,370 + +0.5
627,370 + +0.0
627,370 + +0.2
627,370 + -0.2
627,371 - -1.1
627,371 - +0.5
627,371 - -0.6
627,371 - -0.6
627,371 - +0.2
627,371 - -0.1
627,371 - +0.5
627,371 - -0.5
627,371 - -0.5
627,371 - -0.9
627,371 - -1.0
627,371 - +0.6
627,371 - +0.1
627,371 - +0.9
627,531 + A4249_RS02960 0.13 +0.4
627,531 + A4249_RS02960 0.13 +0.3
627,531 + A4249_RS02960 0.13 +0.0
627,531 + A4249_RS02960 0.13 +0.0
627,531 + A4249_RS02960 0.13 +0.5
627,531 + A4249_RS02960 0.13 -0.7
627,531 + A4249_RS02960 0.13 -0.3
627,531 + A4249_RS02960 0.13 +0.2
627,531 + A4249_RS02960 0.13 +0.4
627,531 + A4249_RS02960 0.13 -0.8
627,531 + A4249_RS02960 0.13 +0.8
627,531 + A4249_RS02960 0.13 -0.2
627,531 + A4249_RS02960 0.13 -0.5
627,532 - A4249_RS02960 0.13 -0.1
627,532 - A4249_RS02960 0.13 -0.3
627,532 - A4249_RS02960 0.13 -1.7
627,532 - A4249_RS02960 0.13 -0.2
627,532 - A4249_RS02960 0.13 +1.4
627,532 - A4249_RS02960 0.13 +0.0
627,735 + A4249_RS02960 0.41 +0.0
627,735 + A4249_RS02960 0.41 -0.3
627,735 + A4249_RS02960 0.41 +0.1
627,736 - A4249_RS02960 0.42 -0.0
627,736 - A4249_RS02960 0.42 +0.1
627,736 - A4249_RS02960 0.42 -1.2
627,736 - A4249_RS02960 0.42 +0.2
627,736 - A4249_RS02960 0.42 +1.0
627,736 - A4249_RS02960 0.42 +0.9
627,894 + A4249_RS02960 0.63 -0.1
627,894 + A4249_RS02960 0.63 -1.3
627,894 + A4249_RS02960 0.63 -0.7
627,894 + A4249_RS02960 0.63 -0.0
627,895 - A4249_RS02960 0.63 -0.9
627,895 - A4249_RS02960 0.63 -0.6
627,927 + A4249_RS02960 0.68 +0.4
627,927 + A4249_RS02960 0.68 +0.6
627,928 - A4249_RS02960 0.68 -0.9
627,928 - A4249_RS02960 0.68 -0.2
627,928 - A4249_RS02960 0.68 -0.8
627,928 - A4249_RS02960 0.68 -2.0
628,146 + -1.5
628,146 + +1.0
628,146 + -0.9
628,147 - -1.6
628,147 - -0.3
628,147 - -1.8
628,147 - -0.5
628,290 + +0.6
628,290 + -1.0
628,290 + -0.3
628,290 + -0.2
628,291 - -0.0
628,291 - -1.2
628,291 - +0.2
628,291 - +0.8
628,331 + -2.2
628,332 - -1.1
628,332 - -0.7
628,332 - +0.3
628,332 - +0.1

Or see this region's nucleotide sequence