Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02610

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02605 and A4249_RS02610 are separated by 83 nucleotidesA4249_RS02610 and A4249_RS02615 are separated by 190 nucleotides A4249_RS02605: A4249_RS02605 - hypothetical protein, at 558,041 to 559,171 _RS02605 A4249_RS02610: A4249_RS02610 - ribose-phosphate pyrophosphokinase, at 559,255 to 560,190 _RS02610 A4249_RS02615: A4249_RS02615 - outer membrane protein assembly factor BamD, at 560,381 to 561,235 _RS02615 Position (kb) 559 560 561Strain fitness (log2 ratio) -2 -1 0 1 2at 558.258 kb on + strand, within A4249_RS02605at 558.258 kb on + strand, within A4249_RS02605at 558.259 kb on - strand, within A4249_RS02605at 558.259 kb on - strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.307 kb on + strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.308 kb on - strand, within A4249_RS02605at 558.353 kb on - strand, within A4249_RS02605at 558.432 kb on + strand, within A4249_RS02605at 558.432 kb on + strand, within A4249_RS02605at 558.432 kb on + strand, within A4249_RS02605at 558.432 kb on + strand, within A4249_RS02605at 558.433 kb on - strand, within A4249_RS02605at 558.433 kb on - strand, within A4249_RS02605at 558.433 kb on - strand, within A4249_RS02605at 558.433 kb on - strand, within A4249_RS02605at 558.433 kb on - strand, within A4249_RS02605at 558.630 kb on + strand, within A4249_RS02605at 558.630 kb on + strand, within A4249_RS02605at 558.631 kb on - strand, within A4249_RS02605at 558.631 kb on - strand, within A4249_RS02605at 558.631 kb on - strand, within A4249_RS02605at 558.631 kb on - strand, within A4249_RS02605at 558.741 kb on + strand, within A4249_RS02605at 558.741 kb on + strand, within A4249_RS02605at 558.742 kb on - strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.801 kb on + strand, within A4249_RS02605at 558.802 kb on - strand, within A4249_RS02605at 558.802 kb on - strand, within A4249_RS02605at 558.802 kb on - strand, within A4249_RS02605at 558.809 kb on + strand, within A4249_RS02605at 558.809 kb on + strand, within A4249_RS02605at 558.810 kb on - strand, within A4249_RS02605at 558.810 kb on - strand, within A4249_RS02605at 558.855 kb on + strand, within A4249_RS02605at 558.856 kb on - strand, within A4249_RS02605at 558.891 kb on + strand, within A4249_RS02605at 558.891 kb on + strand, within A4249_RS02605at 558.892 kb on - strand, within A4249_RS02605at 558.892 kb on - strand, within A4249_RS02605at 558.984 kb on + strand, within A4249_RS02605at 558.984 kb on + strand, within A4249_RS02605at 558.984 kb on + strand, within A4249_RS02605at 558.984 kb on + strand, within A4249_RS02605at 558.985 kb on - strand, within A4249_RS02605at 558.985 kb on - strand, within A4249_RS02605at 558.985 kb on - strand, within A4249_RS02605at 558.985 kb on - strand, within A4249_RS02605at 559.157 kb on + strandat 559.157 kb on + strandat 559.191 kb on + strandat 559.191 kb on + strandat 559.212 kb on + strandat 559.212 kb on + strandat 559.212 kb on + strandat 559.213 kb on - strandat 559.213 kb on - strandat 559.213 kb on - strandat 559.225 kb on + strandat 559.225 kb on + strandat 559.225 kb on + strandat 559.225 kb on + strandat 559.225 kb on + strandat 559.225 kb on + strandat 559.225 kb on + strandat 559.226 kb on - strandat 559.226 kb on - strandat 559.226 kb on - strandat 559.227 kb on + strandat 559.228 kb on - strandat 559.228 kb on - strandat 559.228 kb on - strandat 560.253 kb on + strandat 560.254 kb on - strandat 560.254 kb on - strandat 560.254 kb on - strandat 560.254 kb on - strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.281 kb on + strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.282 kb on - strandat 560.325 kb on + strandat 560.325 kb on + strandat 560.325 kb on + strandat 560.325 kb on + strandat 560.325 kb on + strandat 560.326 kb on - strandat 560.326 kb on - strandat 560.326 kb on - strandat 560.404 kb on + strandat 561.134 kb on + strand, within A4249_RS02615

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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558,258 + A4249_RS02605 0.19 -0.3
558,258 + A4249_RS02605 0.19 -0.5
558,259 - A4249_RS02605 0.19 -0.1
558,259 - A4249_RS02605 0.19 +0.0
558,307 + A4249_RS02605 0.24 +0.3
558,307 + A4249_RS02605 0.24 -0.3
558,307 + A4249_RS02605 0.24 -0.2
558,307 + A4249_RS02605 0.24 -0.3
558,307 + A4249_RS02605 0.24 -0.5
558,307 + A4249_RS02605 0.24 -0.4
558,307 + A4249_RS02605 0.24 +0.2
558,307 + A4249_RS02605 0.24 +0.1
558,307 + A4249_RS02605 0.24 -0.4
558,307 + A4249_RS02605 0.24 -0.5
558,307 + A4249_RS02605 0.24 +0.1
558,307 + A4249_RS02605 0.24 +0.2
558,307 + A4249_RS02605 0.24 -0.2
558,307 + A4249_RS02605 0.24 -0.4
558,307 + A4249_RS02605 0.24 -0.3
558,308 - A4249_RS02605 0.24 -0.3
558,308 - A4249_RS02605 0.24 -0.0
558,308 - A4249_RS02605 0.24 -0.3
558,308 - A4249_RS02605 0.24 +0.2
558,308 - A4249_RS02605 0.24 -0.0
558,308 - A4249_RS02605 0.24 -0.2
558,308 - A4249_RS02605 0.24 +0.1
558,308 - A4249_RS02605 0.24 -0.1
558,308 - A4249_RS02605 0.24 -0.4
558,308 - A4249_RS02605 0.24 -0.6
558,308 - A4249_RS02605 0.24 -1.1
558,308 - A4249_RS02605 0.24 -0.1
558,308 - A4249_RS02605 0.24 -0.1
558,308 - A4249_RS02605 0.24 +0.2
558,308 - A4249_RS02605 0.24 +0.0
558,308 - A4249_RS02605 0.24 +0.4
558,308 - A4249_RS02605 0.24 +0.2
558,308 - A4249_RS02605 0.24 +0.0
558,308 - A4249_RS02605 0.24 -0.0
558,353 - A4249_RS02605 0.28 -0.9
558,432 + A4249_RS02605 0.35 -0.4
558,432 + A4249_RS02605 0.35 -0.0
558,432 + A4249_RS02605 0.35 -0.3
558,432 + A4249_RS02605 0.35 -1.2
558,433 - A4249_RS02605 0.35 +0.2
558,433 - A4249_RS02605 0.35 -0.9
558,433 - A4249_RS02605 0.35 +0.0
558,433 - A4249_RS02605 0.35 -0.3
558,433 - A4249_RS02605 0.35 -0.6
558,630 + A4249_RS02605 0.52 -0.4
558,630 + A4249_RS02605 0.52 -0.1
558,631 - A4249_RS02605 0.52 -0.3
558,631 - A4249_RS02605 0.52 -0.3
558,631 - A4249_RS02605 0.52 +0.0
558,631 - A4249_RS02605 0.52 -0.1
558,741 + A4249_RS02605 0.62 +0.1
558,741 + A4249_RS02605 0.62 +0.3
558,742 - A4249_RS02605 0.62 +0.3
558,801 + A4249_RS02605 0.67 -0.0
558,801 + A4249_RS02605 0.67 +0.4
558,801 + A4249_RS02605 0.67 +0.6
558,801 + A4249_RS02605 0.67 +0.2
558,801 + A4249_RS02605 0.67 +0.5
558,801 + A4249_RS02605 0.67 -0.1
558,801 + A4249_RS02605 0.67 -0.1
558,802 - A4249_RS02605 0.67 -0.1
558,802 - A4249_RS02605 0.67 -0.1
558,802 - A4249_RS02605 0.67 +0.1
558,809 + A4249_RS02605 0.68 -0.1
558,809 + A4249_RS02605 0.68 +0.5
558,810 - A4249_RS02605 0.68 -0.0
558,810 - A4249_RS02605 0.68 +0.2
558,855 + A4249_RS02605 0.72 -0.2
558,856 - A4249_RS02605 0.72 -0.1
558,891 + A4249_RS02605 0.75 -0.8
558,891 + A4249_RS02605 0.75 -0.1
558,892 - A4249_RS02605 0.75 +0.4
558,892 - A4249_RS02605 0.75 +0.4
558,984 + A4249_RS02605 0.83 -0.0
558,984 + A4249_RS02605 0.83 -0.2
558,984 + A4249_RS02605 0.83 -0.4
558,984 + A4249_RS02605 0.83 -0.1
558,985 - A4249_RS02605 0.83 -0.7
558,985 - A4249_RS02605 0.83 +0.3
558,985 - A4249_RS02605 0.83 -0.4
558,985 - A4249_RS02605 0.83 -2.0
559,157 + +0.1
559,157 + -0.2
559,191 + -0.0
559,191 + +1.1
559,212 + +0.0
559,212 + +0.2
559,212 + -0.8
559,213 - +0.8
559,213 - +0.0
559,213 - +0.2
559,225 + -0.0
559,225 + -0.2
559,225 + -0.4
559,225 + +0.4
559,225 + -0.3
559,225 + +0.3
559,225 + +0.1
559,226 - -0.3
559,226 - +0.6
559,226 - -0.4
559,227 + -0.1
559,228 - +0.5
559,228 - +0.3
559,228 - +0.2
560,253 + +0.4
560,254 - -0.8
560,254 - +0.4
560,254 - -0.6
560,254 - -0.5
560,281 + +0.1
560,281 + +0.4
560,281 + +1.7
560,281 + -0.2
560,281 + -0.1
560,281 + -0.2
560,281 + +0.1
560,281 + -0.2
560,281 + +0.1
560,281 + -0.2
560,282 - -0.7
560,282 - +0.2
560,282 - +0.4
560,282 - +0.0
560,282 - +0.5
560,282 - +0.2
560,282 - +2.6
560,282 - -0.5
560,282 - -0.3
560,282 - -0.2
560,282 - -0.3
560,325 + -0.8
560,325 + -0.1
560,325 + +0.1
560,325 + +1.3
560,325 + -0.5
560,326 - -0.7
560,326 - -0.4
560,326 - +0.4
560,404 + -1.1
561,134 + A4249_RS02615 0.88 +0.5

Or see this region's nucleotide sequence