Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02445

Experiment: Xanthine 0.6574 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02440 and A4249_RS02445 overlap by 4 nucleotidesA4249_RS02445 and A4249_RS02450 are separated by 7 nucleotides A4249_RS02440: A4249_RS02440 - pyruvate kinase, at 523,207 to 524,652 _RS02440 A4249_RS02445: A4249_RS02445 - oxidoreductase, at 524,649 to 525,686 _RS02445 A4249_RS02450: A4249_RS02450 - short-chain fatty acyl-CoA regulator family protein, at 525,694 to 527,118 _RS02450 Position (kb) 524 525 526Strain fitness (log2 ratio) -1 0 1at 524.650 kb on + strandat 524.650 kb on + strandat 524.650 kb on + strandat 524.650 kb on + strandat 524.650 kb on + strandat 524.650 kb on + strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.651 kb on - strandat 524.779 kb on + strand, within A4249_RS02445at 524.780 kb on - strand, within A4249_RS02445at 524.792 kb on - strand, within A4249_RS02445at 524.792 kb on - strand, within A4249_RS02445at 524.838 kb on + strand, within A4249_RS02445at 524.838 kb on + strand, within A4249_RS02445at 524.838 kb on + strand, within A4249_RS02445at 524.838 kb on + strand, within A4249_RS02445at 524.838 kb on + strand, within A4249_RS02445at 524.838 kb on + strand, within A4249_RS02445at 524.839 kb on - strand, within A4249_RS02445at 524.839 kb on - strand, within A4249_RS02445at 524.839 kb on - strand, within A4249_RS02445at 524.839 kb on - strand, within A4249_RS02445at 524.974 kb on + strand, within A4249_RS02445at 525.034 kb on + strand, within A4249_RS02445at 525.034 kb on + strand, within A4249_RS02445at 525.034 kb on + strand, within A4249_RS02445at 525.034 kb on + strand, within A4249_RS02445at 525.034 kb on + strand, within A4249_RS02445at 525.035 kb on - strand, within A4249_RS02445at 525.035 kb on - strand, within A4249_RS02445at 525.035 kb on - strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.100 kb on + strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.101 kb on - strand, within A4249_RS02445at 525.226 kb on + strand, within A4249_RS02445at 525.226 kb on + strand, within A4249_RS02445at 525.226 kb on + strand, within A4249_RS02445at 525.226 kb on + strand, within A4249_RS02445at 525.226 kb on + strand, within A4249_RS02445at 525.227 kb on - strand, within A4249_RS02445at 525.227 kb on - strand, within A4249_RS02445at 525.227 kb on - strand, within A4249_RS02445at 525.227 kb on - strand, within A4249_RS02445at 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.728 kb on + strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.729 kb on - strandat 525.875 kb on + strand, within A4249_RS02450at 525.875 kb on + strand, within A4249_RS02450at 525.876 kb on - strand, within A4249_RS02450at 525.876 kb on - strand, within A4249_RS02450at 525.876 kb on - strand, within A4249_RS02450at 525.944 kb on + strand, within A4249_RS02450at 525.944 kb on + strand, within A4249_RS02450at 525.944 kb on + strand, within A4249_RS02450at 525.944 kb on + strand, within A4249_RS02450at 525.945 kb on - strand, within A4249_RS02450at 525.945 kb on - strand, within A4249_RS02450at 525.945 kb on - strand, within A4249_RS02450at 525.945 kb on - strand, within A4249_RS02450at 525.945 kb on - strand, within A4249_RS02450at 525.945 kb on - strand, within A4249_RS02450at 525.986 kb on + strand, within A4249_RS02450at 525.986 kb on + strand, within A4249_RS02450at 525.986 kb on + strand, within A4249_RS02450at 525.986 kb on + strand, within A4249_RS02450at 525.986 kb on + strand, within A4249_RS02450at 525.987 kb on - strand, within A4249_RS02450at 525.987 kb on - strand, within A4249_RS02450at 525.987 kb on - strand, within A4249_RS02450at 525.987 kb on - strand, within A4249_RS02450at 526.154 kb on + strand, within A4249_RS02450at 526.154 kb on + strand, within A4249_RS02450at 526.154 kb on + strand, within A4249_RS02450at 526.155 kb on - strand, within A4249_RS02450at 526.155 kb on - strand, within A4249_RS02450at 526.155 kb on - strand, within A4249_RS02450at 526.319 kb on + strand, within A4249_RS02450at 526.319 kb on + strand, within A4249_RS02450at 526.319 kb on + strand, within A4249_RS02450at 526.319 kb on + strand, within A4249_RS02450at 526.319 kb on + strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.320 kb on - strand, within A4249_RS02450at 526.499 kb on + strand, within A4249_RS02450at 526.499 kb on + strand, within A4249_RS02450at 526.500 kb on - strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.529 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.646 kb on + strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.647 kb on - strand, within A4249_RS02450at 526.685 kb on + strand, within A4249_RS02450

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Per-strain Table

Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C)
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524,650 + +0.5
524,650 + -0.3
524,650 + +0.8
524,650 + -0.4
524,650 + +0.1
524,650 + +0.4
524,651 - +0.4
524,651 - -1.6
524,651 - -0.8
524,651 - -1.4
524,651 - -0.2
524,651 - -0.2
524,651 - +0.0
524,651 - -0.1
524,651 - -1.4
524,779 + A4249_RS02445 0.13 -0.3
524,780 - A4249_RS02445 0.13 -0.1
524,792 - A4249_RS02445 0.14 -0.0
524,792 - A4249_RS02445 0.14 +0.5
524,838 + A4249_RS02445 0.18 +1.0
524,838 + A4249_RS02445 0.18 +0.6
524,838 + A4249_RS02445 0.18 +0.1
524,838 + A4249_RS02445 0.18 -0.8
524,838 + A4249_RS02445 0.18 +0.3
524,838 + A4249_RS02445 0.18 +1.5
524,839 - A4249_RS02445 0.18 +0.6
524,839 - A4249_RS02445 0.18 -0.9
524,839 - A4249_RS02445 0.18 -0.5
524,839 - A4249_RS02445 0.18 +1.4
524,974 + A4249_RS02445 0.31 -0.5
525,034 + A4249_RS02445 0.37 +0.1
525,034 + A4249_RS02445 0.37 -0.2
525,034 + A4249_RS02445 0.37 -0.0
525,034 + A4249_RS02445 0.37 +0.1
525,034 + A4249_RS02445 0.37 -1.2
525,035 - A4249_RS02445 0.37 +0.0
525,035 - A4249_RS02445 0.37 -0.2
525,035 - A4249_RS02445 0.37 +0.2
525,100 + A4249_RS02445 0.43 -0.7
525,100 + A4249_RS02445 0.43 +0.4
525,100 + A4249_RS02445 0.43 +1.0
525,100 + A4249_RS02445 0.43 +0.0
525,100 + A4249_RS02445 0.43 +0.4
525,100 + A4249_RS02445 0.43 +0.4
525,100 + A4249_RS02445 0.43 -1.4
525,100 + A4249_RS02445 0.43 +0.1
525,100 + A4249_RS02445 0.43 -0.4
525,100 + A4249_RS02445 0.43 +0.0
525,100 + A4249_RS02445 0.43 -0.6
525,100 + A4249_RS02445 0.43 +0.3
525,100 + A4249_RS02445 0.43 -0.0
525,100 + A4249_RS02445 0.43 +0.5
525,100 + A4249_RS02445 0.43 +0.1
525,100 + A4249_RS02445 0.43 +0.3
525,100 + A4249_RS02445 0.43 +0.2
525,100 + A4249_RS02445 0.43 +0.6
525,100 + A4249_RS02445 0.43 -0.9
525,100 + A4249_RS02445 0.43 -0.4
525,101 - A4249_RS02445 0.44 -0.4
525,101 - A4249_RS02445 0.44 -0.3
525,101 - A4249_RS02445 0.44 -0.4
525,101 - A4249_RS02445 0.44 +0.6
525,101 - A4249_RS02445 0.44 -0.5
525,101 - A4249_RS02445 0.44 -0.3
525,101 - A4249_RS02445 0.44 -0.1
525,101 - A4249_RS02445 0.44 -0.0
525,101 - A4249_RS02445 0.44 +0.5
525,101 - A4249_RS02445 0.44 +0.1
525,101 - A4249_RS02445 0.44 -0.8
525,101 - A4249_RS02445 0.44 -0.3
525,101 - A4249_RS02445 0.44 -0.3
525,101 - A4249_RS02445 0.44 -0.8
525,101 - A4249_RS02445 0.44 -0.7
525,101 - A4249_RS02445 0.44 -0.2
525,101 - A4249_RS02445 0.44 +0.4
525,226 + A4249_RS02445 0.56 +0.2
525,226 + A4249_RS02445 0.56 -0.4
525,226 + A4249_RS02445 0.56 -0.6
525,226 + A4249_RS02445 0.56 -0.2
525,226 + A4249_RS02445 0.56 +0.1
525,227 - A4249_RS02445 0.56 -0.3
525,227 - A4249_RS02445 0.56 -0.0
525,227 - A4249_RS02445 0.56 -0.5
525,227 - A4249_RS02445 0.56 -0.3
525,728 + -0.0
525,728 + -0.4
525,728 + -0.1
525,728 + +0.1
525,728 + -0.5
525,728 + -0.3
525,728 + +0.3
525,728 + -0.0
525,728 + -0.7
525,728 + -0.5
525,728 + +0.7
525,729 - -0.2
525,729 - -0.2
525,729 - +0.0
525,729 - -0.2
525,729 - -0.7
525,729 - -0.2
525,729 - +0.1
525,729 - +0.4
525,875 + A4249_RS02450 0.13 -0.6
525,875 + A4249_RS02450 0.13 -0.6
525,876 - A4249_RS02450 0.13 -1.2
525,876 - A4249_RS02450 0.13 -0.3
525,876 - A4249_RS02450 0.13 -0.2
525,944 + A4249_RS02450 0.18 +1.0
525,944 + A4249_RS02450 0.18 +0.6
525,944 + A4249_RS02450 0.18 +0.1
525,944 + A4249_RS02450 0.18 +0.1
525,945 - A4249_RS02450 0.18 -0.3
525,945 - A4249_RS02450 0.18 +0.1
525,945 - A4249_RS02450 0.18 -0.5
525,945 - A4249_RS02450 0.18 -1.6
525,945 - A4249_RS02450 0.18 -1.5
525,945 - A4249_RS02450 0.18 -0.2
525,986 + A4249_RS02450 0.20 -0.3
525,986 + A4249_RS02450 0.20 -0.0
525,986 + A4249_RS02450 0.20 +0.1
525,986 + A4249_RS02450 0.20 -0.3
525,986 + A4249_RS02450 0.20 -0.5
525,987 - A4249_RS02450 0.21 +0.7
525,987 - A4249_RS02450 0.21 +0.0
525,987 - A4249_RS02450 0.21 +1.6
525,987 - A4249_RS02450 0.21 -0.1
526,154 + A4249_RS02450 0.32 +0.9
526,154 + A4249_RS02450 0.32 -0.5
526,154 + A4249_RS02450 0.32 -1.7
526,155 - A4249_RS02450 0.32 +0.1
526,155 - A4249_RS02450 0.32 +1.4
526,155 - A4249_RS02450 0.32 +0.3
526,319 + A4249_RS02450 0.44 -0.6
526,319 + A4249_RS02450 0.44 -0.5
526,319 + A4249_RS02450 0.44 +0.6
526,319 + A4249_RS02450 0.44 +0.7
526,319 + A4249_RS02450 0.44 +0.7
526,320 - A4249_RS02450 0.44 +0.3
526,320 - A4249_RS02450 0.44 -0.8
526,320 - A4249_RS02450 0.44 +0.1
526,320 - A4249_RS02450 0.44 +0.6
526,320 - A4249_RS02450 0.44 -0.8
526,320 - A4249_RS02450 0.44 -0.3
526,320 - A4249_RS02450 0.44 +0.7
526,320 - A4249_RS02450 0.44 -0.1
526,499 + A4249_RS02450 0.56 -1.1
526,499 + A4249_RS02450 0.56 +0.4
526,500 - A4249_RS02450 0.57 -0.7
526,529 + A4249_RS02450 0.59 +1.2
526,529 + A4249_RS02450 0.59 -0.5
526,529 + A4249_RS02450 0.59 -0.5
526,529 + A4249_RS02450 0.59 -1.0
526,529 + A4249_RS02450 0.59 +1.4
526,529 + A4249_RS02450 0.59 -0.4
526,529 + A4249_RS02450 0.59 +1.2
526,646 + A4249_RS02450 0.67 -0.6
526,646 + A4249_RS02450 0.67 +0.0
526,646 + A4249_RS02450 0.67 -0.3
526,646 + A4249_RS02450 0.67 -0.8
526,646 + A4249_RS02450 0.67 +0.6
526,646 + A4249_RS02450 0.67 -0.2
526,646 + A4249_RS02450 0.67 +0.7
526,646 + A4249_RS02450 0.67 -0.4
526,646 + A4249_RS02450 0.67 +1.2
526,646 + A4249_RS02450 0.67 +0.0
526,646 + A4249_RS02450 0.67 -1.2
526,647 - A4249_RS02450 0.67 -0.2
526,647 - A4249_RS02450 0.67 -0.0
526,647 - A4249_RS02450 0.67 -0.6
526,647 - A4249_RS02450 0.67 -0.4
526,647 - A4249_RS02450 0.67 -0.3
526,647 - A4249_RS02450 0.67 +0.0
526,647 - A4249_RS02450 0.67 +0.1
526,647 - A4249_RS02450 0.67 -0.1
526,647 - A4249_RS02450 0.67 -0.3
526,647 - A4249_RS02450 0.67 +0.1
526,647 - A4249_RS02450 0.67 +0.4
526,647 - A4249_RS02450 0.67 +1.4
526,685 + A4249_RS02450 0.70 -0.3

Or see this region's nucleotide sequence