Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00920 and A4249_RS00925 are separated by 162 nucleotides A4249_RS00925 and A4249_RS00930 are separated by 22 nucleotides A4249_RS00930 and A4249_RS17015 are separated by 35 nucleotides A4249_RS17015 and A4249_RS00935 are separated by 4 nucleotides
A4249_RS00920: A4249_RS00920 - adenylosuccinate lyase, at 168,846 to 170,147
_RS00920
A4249_RS00925: A4249_RS00925 - multidrug efflux SMR transporter, at 170,310 to 170,630
_RS00925
A4249_RS00930: A4249_RS00930 - glutathione S-transferase family protein, at 170,653 to 171,321
_RS00930
A4249_RS17015: A4249_RS17015 - hypothetical protein, at 171,357 to 171,488
_RS17015
A4249_RS00935: A4249_RS00935 - lytic transglycosylase domain-containing protein, at 171,493 to 173,178
_RS00935
Position (kb) 170
171 Strain fitness (log2 ratio) -2
-1
0
1 at 170.320 kb on + strand at 170.321 kb on - strand at 170.321 kb on - strand at 170.485 kb on - strand, within A4249_RS00925 at 170.485 kb on - strand, within A4249_RS00925 at 170.680 kb on + strand at 170.680 kb on + strand at 170.681 kb on - strand at 170.681 kb on - strand at 171.092 kb on + strand, within A4249_RS00930 at 171.092 kb on + strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.122 kb on - strand, within A4249_RS00930 at 171.122 kb on - strand, within A4249_RS00930 at 171.236 kb on - strand, within A4249_RS00930 at 171.236 kb on - strand, within A4249_RS00930 at 171.236 kb on - strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.330 kb on + strand at 171.330 kb on + strand at 171.330 kb on + strand at 171.331 kb on - strand at 171.344 kb on + strand at 171.344 kb on + strand at 171.344 kb on + strand at 171.427 kb on - strand, within A4249_RS17015 at 171.486 kb on + strand at 171.487 kb on - strand at 171.487 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 170,320 + +0.2 170,321 - +1.3 170,321 - +1.5 170,485 - A4249_RS00925 0.55 -0.9 170,485 - A4249_RS00925 0.55 -0.5 170,680 + -0.0 170,680 + -0.9 170,681 - -0.0 170,681 - +0.9 171,092 + A4249_RS00930 0.66 +0.8 171,092 + A4249_RS00930 0.66 -1.5 171,093 - A4249_RS00930 0.66 +0.3 171,093 - A4249_RS00930 0.66 +1.1 171,093 - A4249_RS00930 0.66 +0.1 171,093 - A4249_RS00930 0.66 +0.3 171,121 + A4249_RS00930 0.70 -0.6 171,121 + A4249_RS00930 0.70 +0.8 171,121 + A4249_RS00930 0.70 +0.7 171,121 + A4249_RS00930 0.70 +0.3 171,121 + A4249_RS00930 0.70 -0.4 171,121 + A4249_RS00930 0.70 -0.2 171,122 - A4249_RS00930 0.70 -0.3 171,122 - A4249_RS00930 0.70 -0.0 171,236 - A4249_RS00930 0.87 -0.2 171,236 - A4249_RS00930 0.87 -0.8 171,236 - A4249_RS00930 0.87 -0.5 171,248 + A4249_RS00930 0.89 +0.1 171,248 + A4249_RS00930 0.89 -0.8 171,248 + A4249_RS00930 0.89 -0.6 171,248 + A4249_RS00930 0.89 +0.2 171,249 - A4249_RS00930 0.89 -0.1 171,249 - A4249_RS00930 0.89 +0.3 171,249 - A4249_RS00930 0.89 -1.5 171,249 - A4249_RS00930 0.89 -0.2 171,249 - A4249_RS00930 0.89 +1.0 171,330 + -0.5 171,330 + +0.2 171,330 + -0.2 171,331 - +0.1 171,344 + +0.5 171,344 + +0.5 171,344 + -0.4 171,427 - A4249_RS17015 0.53 +0.9 171,486 + -0.1 171,487 - -0.6 171,487 - -1.8 171,564 - +0.2 171,564 - -0.4 171,564 - +0.9 171,564 - +0.1 171,564 - -0.7
Or see this region's nucleotide sequence