Experiment: Xanthine 0.6574 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00800 and A4249_RS00805 are separated by 10 nucleotides A4249_RS00805 and A4249_RS00810 overlap by 22 nucleotides A4249_RS00810 and A4249_RS00815 are separated by 65 nucleotides A4249_RS00815 and A4249_RS00820 are separated by 26 nucleotides
A4249_RS00800: A4249_RS00800 - 5-formyltetrahydrofolate cyclo-ligase, at 150,660 to 151,232
_RS00800
A4249_RS00805: A4249_RS00805 - TIGR00282 family metallophosphoesterase, at 151,243 to 152,064
_RS00805
A4249_RS00810: A4249_RS00810 - glycosyltransferase family 4 protein, at 152,043 to 153,134
_RS00810
A4249_RS00815: A4249_RS00815 - tyrosine-protein phosphatase, at 153,200 to 153,742
_RS00815
A4249_RS00820: A4249_RS00820 - hypothetical protein, at 153,769 to 154,557
_RS00820
Position (kb) 152
153
154 Strain fitness (log2 ratio) -2
-1
0
1
2 at 151.083 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.137 kb on + strand, within A4249_RS00800 at 151.216 kb on - strand at 151.217 kb on + strand at 151.217 kb on + strand at 151.217 kb on + strand at 151.217 kb on + strand at 151.218 kb on - strand at 151.218 kb on - strand at 151.474 kb on + strand, within A4249_RS00805 at 151.474 kb on + strand, within A4249_RS00805 at 152.133 kb on - strand at 152.149 kb on + strand at 152.149 kb on + strand at 152.149 kb on + strand at 152.149 kb on + strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.220 kb on + strand, within A4249_RS00810 at 152.221 kb on - strand, within A4249_RS00810 at 152.246 kb on + strand, within A4249_RS00810 at 152.247 kb on - strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.248 kb on + strand, within A4249_RS00810 at 152.249 kb on - strand, within A4249_RS00810 at 152.249 kb on - strand, within A4249_RS00810 at 152.249 kb on - strand, within A4249_RS00810 at 152.767 kb on + strand, within A4249_RS00810 at 152.768 kb on - strand, within A4249_RS00810 at 152.830 kb on + strand, within A4249_RS00810 at 152.830 kb on + strand, within A4249_RS00810 at 152.831 kb on - strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.883 kb on + strand, within A4249_RS00810 at 152.884 kb on - strand, within A4249_RS00810 at 152.884 kb on - strand, within A4249_RS00810 at 152.884 kb on - strand, within A4249_RS00810 at 152.936 kb on + strand, within A4249_RS00810 at 152.936 kb on + strand, within A4249_RS00810 at 152.936 kb on + strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 152.937 kb on - strand, within A4249_RS00810 at 153.147 kb on + strand at 153.148 kb on - strand at 153.148 kb on - strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.166 kb on + strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.167 kb on - strand at 153.168 kb on + strand at 153.168 kb on + strand at 153.168 kb on + strand at 153.169 kb on - strand at 153.169 kb on - strand at 153.169 kb on - strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.201 kb on + strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.202 kb on - strand at 153.258 kb on + strand, within A4249_RS00815 at 153.259 kb on - strand, within A4249_RS00815 at 153.351 kb on + strand, within A4249_RS00815 at 153.351 kb on + strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.352 kb on - strand, within A4249_RS00815 at 153.537 kb on + strand, within A4249_RS00815 at 153.538 kb on - strand, within A4249_RS00815 at 153.642 kb on + strand, within A4249_RS00815 at 153.642 kb on + strand, within A4249_RS00815 at 153.643 kb on - strand, within A4249_RS00815 at 153.643 kb on - strand, within A4249_RS00815 at 153.699 kb on + strand at 153.699 kb on + strand at 153.699 kb on + strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.700 kb on - strand at 153.789 kb on + strand at 153.789 kb on + strand at 153.803 kb on + strand at 153.803 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.844 kb on + strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 153.845 kb on - strand at 154.049 kb on + strand, within A4249_RS00820 at 154.050 kb on - strand, within A4249_RS00820 at 154.050 kb on - strand, within A4249_RS00820 at 154.127 kb on + strand, within A4249_RS00820 at 154.127 kb on + strand, within A4249_RS00820 at 154.127 kb on + strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820 at 154.128 kb on - strand, within A4249_RS00820
Per-strain Table
Position Strand Gene LocusTag Fraction Xanthine 0.6574 mM (C) remove 151,083 + A4249_RS00800 0.74 -0.2 151,086 + A4249_RS00800 0.74 +0.0 151,086 + A4249_RS00800 0.74 -1.6 151,086 + A4249_RS00800 0.74 +0.6 151,086 + A4249_RS00800 0.74 -1.3 151,086 + A4249_RS00800 0.74 -0.4 151,087 - A4249_RS00800 0.75 -1.3 151,087 - A4249_RS00800 0.75 -0.8 151,087 - A4249_RS00800 0.75 +0.5 151,087 - A4249_RS00800 0.75 -1.1 151,137 + A4249_RS00800 0.83 +0.6 151,216 - +1.2 151,217 + +0.3 151,217 + +0.2 151,217 + -0.9 151,217 + +0.0 151,218 - -0.0 151,218 - +0.4 151,474 + A4249_RS00805 0.28 +0.2 151,474 + A4249_RS00805 0.28 -0.1 152,133 - +0.0 152,149 + -1.1 152,149 + +0.2 152,149 + +0.1 152,149 + +0.2 152,150 - -0.2 152,150 - -2.0 152,150 - -0.7 152,150 - +0.9 152,150 - -1.9 152,150 - -0.5 152,150 - +0.4 152,150 - -1.9 152,150 - -0.6 152,150 - -0.6 152,150 - -0.3 152,220 + A4249_RS00810 0.16 -0.2 152,221 - A4249_RS00810 0.16 +0.4 152,246 + A4249_RS00810 0.19 -0.6 152,247 - A4249_RS00810 0.19 -0.1 152,248 + A4249_RS00810 0.19 -0.2 152,248 + A4249_RS00810 0.19 -1.4 152,248 + A4249_RS00810 0.19 +0.0 152,248 + A4249_RS00810 0.19 -0.3 152,248 + A4249_RS00810 0.19 +0.3 152,248 + A4249_RS00810 0.19 +0.4 152,248 + A4249_RS00810 0.19 -0.0 152,248 + A4249_RS00810 0.19 -2.3 152,248 + A4249_RS00810 0.19 -0.5 152,248 + A4249_RS00810 0.19 -0.1 152,248 + A4249_RS00810 0.19 +0.8 152,248 + A4249_RS00810 0.19 -0.5 152,249 - A4249_RS00810 0.19 -0.5 152,249 - A4249_RS00810 0.19 -1.5 152,249 - A4249_RS00810 0.19 -0.0 152,767 + A4249_RS00810 0.66 -1.2 152,768 - A4249_RS00810 0.66 +0.4 152,830 + A4249_RS00810 0.72 +0.3 152,830 + A4249_RS00810 0.72 -0.1 152,831 - A4249_RS00810 0.72 -0.3 152,883 + A4249_RS00810 0.77 -0.5 152,883 + A4249_RS00810 0.77 -0.8 152,883 + A4249_RS00810 0.77 +0.1 152,883 + A4249_RS00810 0.77 -0.3 152,884 - A4249_RS00810 0.77 -0.9 152,884 - A4249_RS00810 0.77 -0.2 152,884 - A4249_RS00810 0.77 +0.1 152,936 + A4249_RS00810 0.82 -0.3 152,936 + A4249_RS00810 0.82 +0.3 152,936 + A4249_RS00810 0.82 +1.0 152,937 - A4249_RS00810 0.82 -1.4 152,937 - A4249_RS00810 0.82 +0.3 152,937 - A4249_RS00810 0.82 -0.7 152,937 - A4249_RS00810 0.82 -1.6 153,147 + -0.3 153,148 - -2.5 153,148 - -0.1 153,166 + -0.7 153,166 + +0.4 153,166 + +0.5 153,166 + +0.2 153,166 + -0.1 153,166 + -0.7 153,166 + +1.1 153,166 + -0.1 153,166 + +0.1 153,166 + -0.0 153,166 + -0.4 153,166 + -2.0 153,166 + -0.6 153,166 + -0.2 153,167 - -1.7 153,167 - +2.2 153,167 - +0.6 153,167 - -0.4 153,167 - -0.9 153,167 - -0.8 153,167 - -0.4 153,167 - -1.2 153,167 - +0.0 153,167 - +0.6 153,167 - +0.3 153,167 - +0.3 153,167 - -0.8 153,167 - +0.2 153,167 - +0.4 153,168 + -0.8 153,168 + +0.3 153,168 + -0.3 153,169 - +0.5 153,169 - -0.2 153,169 - -0.5 153,201 + -1.6 153,201 + -0.5 153,201 + +0.2 153,201 + +0.3 153,201 + -0.6 153,201 + -0.1 153,201 + -1.2 153,202 - +0.9 153,202 - +1.5 153,202 - -0.3 153,202 - -2.6 153,202 - -0.3 153,202 - -0.3 153,258 + A4249_RS00815 0.11 +0.1 153,259 - A4249_RS00815 0.11 -0.2 153,351 + A4249_RS00815 0.28 -0.0 153,351 + A4249_RS00815 0.28 -0.3 153,352 - A4249_RS00815 0.28 -0.0 153,352 - A4249_RS00815 0.28 +0.5 153,352 - A4249_RS00815 0.28 +0.3 153,352 - A4249_RS00815 0.28 +0.4 153,352 - A4249_RS00815 0.28 -0.6 153,352 - A4249_RS00815 0.28 -0.4 153,537 + A4249_RS00815 0.62 -0.3 153,538 - A4249_RS00815 0.62 -0.1 153,642 + A4249_RS00815 0.81 -1.6 153,642 + A4249_RS00815 0.81 +0.2 153,643 - A4249_RS00815 0.82 +0.1 153,643 - A4249_RS00815 0.82 +0.0 153,699 + +0.2 153,699 + -0.2 153,699 + +1.2 153,700 - +0.2 153,700 - -0.6 153,700 - -0.7 153,700 - -0.7 153,700 - -0.8 153,700 - +0.6 153,789 + +0.5 153,789 + -0.1 153,803 + +0.2 153,803 + -0.4 153,844 + -1.4 153,844 + -0.5 153,844 + +0.0 153,844 + +0.1 153,844 + +0.5 153,844 + -0.5 153,844 + +0.2 153,844 + -0.1 153,845 - -0.5 153,845 - -1.3 153,845 - -0.2 153,845 - -0.2 153,845 - -1.0 153,845 - +0.3 153,845 - -0.3 154,049 + A4249_RS00820 0.35 -0.5 154,050 - A4249_RS00820 0.36 -1.4 154,050 - A4249_RS00820 0.36 -0.0 154,127 + A4249_RS00820 0.45 -0.8 154,127 + A4249_RS00820 0.45 -0.2 154,127 + A4249_RS00820 0.45 +1.0 154,128 - A4249_RS00820 0.46 +0.5 154,128 - A4249_RS00820 0.46 +0.3 154,128 - A4249_RS00820 0.46 -0.7 154,128 - A4249_RS00820 0.46 -0.8 154,128 - A4249_RS00820 0.46 -0.0 154,128 - A4249_RS00820 0.46 +0.1
Or see this region's nucleotide sequence