Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7177 and GFF7178 are separated by 14 nucleotides GFF7178 and GFF7179 overlap by 4 nucleotides GFF7179 and GFF7180 are separated by 346 nucleotides
GFF7177 - S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B, at 41,809 to 42,189
GFF7177
GFF7178 - Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24), at 42,204 to 42,914
GFF7178
GFF7179 - Xaa-Pro aminopeptidase (EC 3.4.11.9), at 42,911 to 44,308
GFF7179
GFF7180 - no description, at 44,655 to 45,350
GFF7180
Position (kb) 42
43
44
45 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.064 kb on + strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.065 kb on - strand, within GFF7177 at 42.413 kb on + strand, within GFF7178 at 42.723 kb on + strand, within GFF7178 at 42.750 kb on + strand, within GFF7178 at 42.751 kb on - strand, within GFF7178 at 42.849 kb on + strand at 42.849 kb on + strand at 42.849 kb on + strand at 42.850 kb on - strand at 42.850 kb on - strand at 42.850 kb on - strand at 42.938 kb on + strand at 42.939 kb on - strand at 42.939 kb on - strand at 42.939 kb on - strand at 42.939 kb on - strand at 42.939 kb on - strand at 42.939 kb on - strand at 43.043 kb on + strand at 43.044 kb on - strand at 43.044 kb on - strand at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.058 kb on + strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.059 kb on - strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.064 kb on + strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.065 kb on - strand, within GFF7179 at 43.068 kb on - strand, within GFF7179 at 43.068 kb on - strand, within GFF7179 at 43.068 kb on - strand, within GFF7179 at 43.547 kb on + strand, within GFF7179 at 43.548 kb on - strand, within GFF7179 at 43.607 kb on + strand, within GFF7179 at 43.607 kb on + strand, within GFF7179 at 43.607 kb on + strand, within GFF7179 at 43.607 kb on + strand, within GFF7179 at 43.608 kb on - strand, within GFF7179 at 43.608 kb on - strand, within GFF7179 at 43.608 kb on - strand, within GFF7179 at 43.608 kb on - strand, within GFF7179 at 43.608 kb on - strand, within GFF7179 at 43.608 kb on - strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.610 kb on + strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.611 kb on - strand, within GFF7179 at 43.652 kb on + strand, within GFF7179 at 43.725 kb on - strand, within GFF7179 at 43.790 kb on + strand, within GFF7179 at 43.790 kb on + strand, within GFF7179 at 43.790 kb on + strand, within GFF7179 at 43.790 kb on + strand, within GFF7179 at 43.791 kb on - strand, within GFF7179 at 43.791 kb on - strand, within GFF7179 at 43.791 kb on - strand, within GFF7179 at 43.791 kb on - strand, within GFF7179 at 43.964 kb on + strand, within GFF7179 at 43.965 kb on - strand, within GFF7179 at 43.965 kb on - strand, within GFF7179 at 43.965 kb on - strand, within GFF7179 at 43.974 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.976 kb on + strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 43.977 kb on - strand, within GFF7179 at 44.030 kb on + strand, within GFF7179 at 44.031 kb on - strand, within GFF7179 at 44.031 kb on - strand, within GFF7179 at 44.031 kb on - strand, within GFF7179 at 44.156 kb on + strand, within GFF7179 at 44.156 kb on + strand, within GFF7179 at 44.156 kb on + strand, within GFF7179 at 44.156 kb on + strand, within GFF7179 at 44.156 kb on + strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.157 kb on - strand, within GFF7179 at 44.404 kb on + strand at 44.404 kb on + strand at 44.404 kb on + strand at 44.405 kb on - strand at 44.405 kb on - strand at 44.410 kb on + strand at 44.410 kb on + strand at 44.410 kb on + strand at 44.411 kb on - strand at 44.411 kb on - strand at 44.411 kb on - strand at 44.411 kb on - strand at 44.606 kb on - strand at 44.617 kb on + strand at 44.617 kb on + strand at 44.618 kb on - strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.641 kb on + strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.642 kb on - strand at 44.704 kb on + strand at 44.705 kb on - strand at 45.135 kb on + strand, within GFF7180 at 45.136 kb on - strand, within GFF7180 at 45.296 kb on + strand at 45.296 kb on + strand at 45.296 kb on + strand at 45.296 kb on + strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand at 45.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 42,064 + GFF7177 0.67 -0.5 42,064 + GFF7177 0.67 -0.7 42,064 + GFF7177 0.67 +0.4 42,064 + GFF7177 0.67 -0.3 42,064 + GFF7177 0.67 +1.3 42,064 + GFF7177 0.67 -0.2 42,064 + GFF7177 0.67 -0.1 42,064 + GFF7177 0.67 +0.2 42,065 - GFF7177 0.67 +1.7 42,065 - GFF7177 0.67 -0.9 42,065 - GFF7177 0.67 -0.6 42,065 - GFF7177 0.67 +0.1 42,065 - GFF7177 0.67 -0.5 42,065 - GFF7177 0.67 -0.2 42,065 - GFF7177 0.67 -1.1 42,065 - GFF7177 0.67 +0.4 42,065 - GFF7177 0.67 -0.7 42,065 - GFF7177 0.67 -0.6 42,065 - GFF7177 0.67 +1.3 42,413 + GFF7178 0.29 +2.0 42,723 + GFF7178 0.73 -0.8 42,750 + GFF7178 0.77 -0.9 42,751 - GFF7178 0.77 +1.3 42,849 + +0.1 42,849 + +0.3 42,849 + +1.3 42,850 - +0.0 42,850 - +0.1 42,850 - -0.4 42,938 + -0.1 42,939 - -0.4 42,939 - -0.0 42,939 - +0.2 42,939 - +0.4 42,939 - -0.0 42,939 - -0.4 43,043 + +0.6 43,044 - -1.1 43,044 - +0.3 43,058 + GFF7179 0.11 -0.1 43,058 + GFF7179 0.11 +0.0 43,058 + GFF7179 0.11 +0.1 43,058 + GFF7179 0.11 +0.5 43,058 + GFF7179 0.11 +0.0 43,058 + GFF7179 0.11 -0.3 43,058 + GFF7179 0.11 -0.9 43,058 + GFF7179 0.11 +0.2 43,058 + GFF7179 0.11 +0.9 43,058 + GFF7179 0.11 +0.3 43,058 + GFF7179 0.11 -0.1 43,058 + GFF7179 0.11 +0.1 43,058 + GFF7179 0.11 -0.5 43,058 + GFF7179 0.11 +0.6 43,058 + GFF7179 0.11 -0.9 43,058 + GFF7179 0.11 -1.0 43,058 + GFF7179 0.11 +0.3 43,058 + GFF7179 0.11 -0.7 43,058 + GFF7179 0.11 +0.6 43,059 - GFF7179 0.11 -1.4 43,059 - GFF7179 0.11 +0.3 43,059 - GFF7179 0.11 +0.6 43,059 - GFF7179 0.11 -0.1 43,059 - GFF7179 0.11 +0.4 43,059 - GFF7179 0.11 +0.9 43,059 - GFF7179 0.11 -0.2 43,059 - GFF7179 0.11 -1.3 43,059 - GFF7179 0.11 -0.7 43,059 - GFF7179 0.11 -0.7 43,059 - GFF7179 0.11 +0.3 43,059 - GFF7179 0.11 +0.2 43,059 - GFF7179 0.11 +0.2 43,064 + GFF7179 0.11 +0.2 43,064 + GFF7179 0.11 -1.0 43,064 + GFF7179 0.11 -0.3 43,064 + GFF7179 0.11 +0.4 43,064 + GFF7179 0.11 +0.2 43,064 + GFF7179 0.11 -0.2 43,064 + GFF7179 0.11 +0.5 43,064 + GFF7179 0.11 +1.0 43,064 + GFF7179 0.11 -0.2 43,064 + GFF7179 0.11 +0.2 43,064 + GFF7179 0.11 -0.4 43,065 - GFF7179 0.11 -0.8 43,065 - GFF7179 0.11 +0.3 43,065 - GFF7179 0.11 +0.7 43,065 - GFF7179 0.11 -0.7 43,065 - GFF7179 0.11 -0.4 43,065 - GFF7179 0.11 +0.5 43,065 - GFF7179 0.11 +1.4 43,065 - GFF7179 0.11 -0.4 43,065 - GFF7179 0.11 -0.9 43,065 - GFF7179 0.11 +0.1 43,065 - GFF7179 0.11 +0.2 43,065 - GFF7179 0.11 -0.3 43,068 - GFF7179 0.11 +0.2 43,068 - GFF7179 0.11 -0.4 43,068 - GFF7179 0.11 -0.1 43,547 + GFF7179 0.45 +1.5 43,548 - GFF7179 0.46 -0.3 43,607 + GFF7179 0.50 +0.3 43,607 + GFF7179 0.50 -2.3 43,607 + GFF7179 0.50 +0.5 43,607 + GFF7179 0.50 -0.6 43,608 - GFF7179 0.50 +0.2 43,608 - GFF7179 0.50 +0.8 43,608 - GFF7179 0.50 -0.3 43,608 - GFF7179 0.50 +0.3 43,608 - GFF7179 0.50 +1.0 43,608 - GFF7179 0.50 -0.8 43,610 + GFF7179 0.50 +0.4 43,610 + GFF7179 0.50 +0.7 43,610 + GFF7179 0.50 -1.3 43,610 + GFF7179 0.50 +0.4 43,610 + GFF7179 0.50 +0.0 43,610 + GFF7179 0.50 -0.0 43,610 + GFF7179 0.50 -0.1 43,610 + GFF7179 0.50 -0.9 43,610 + GFF7179 0.50 -0.0 43,611 - GFF7179 0.50 -0.1 43,611 - GFF7179 0.50 +0.5 43,611 - GFF7179 0.50 +0.2 43,611 - GFF7179 0.50 +0.0 43,611 - GFF7179 0.50 +0.1 43,611 - GFF7179 0.50 +2.5 43,611 - GFF7179 0.50 -0.3 43,611 - GFF7179 0.50 -0.3 43,652 + GFF7179 0.53 +0.6 43,725 - GFF7179 0.58 +1.6 43,790 + GFF7179 0.63 +0.0 43,790 + GFF7179 0.63 +0.4 43,790 + GFF7179 0.63 -0.0 43,790 + GFF7179 0.63 -0.2 43,791 - GFF7179 0.63 +0.5 43,791 - GFF7179 0.63 +0.9 43,791 - GFF7179 0.63 +0.3 43,791 - GFF7179 0.63 +1.7 43,964 + GFF7179 0.75 +0.6 43,965 - GFF7179 0.75 -0.6 43,965 - GFF7179 0.75 -0.1 43,965 - GFF7179 0.75 -0.3 43,974 + GFF7179 0.76 +0.6 43,976 + GFF7179 0.76 -1.1 43,976 + GFF7179 0.76 -0.3 43,976 + GFF7179 0.76 -0.2 43,976 + GFF7179 0.76 -0.2 43,976 + GFF7179 0.76 +0.2 43,976 + GFF7179 0.76 +0.7 43,976 + GFF7179 0.76 +0.0 43,977 - GFF7179 0.76 +2.9 43,977 - GFF7179 0.76 -0.4 43,977 - GFF7179 0.76 +0.4 43,977 - GFF7179 0.76 +0.4 43,977 - GFF7179 0.76 +1.6 43,977 - GFF7179 0.76 -0.6 43,977 - GFF7179 0.76 -0.4 43,977 - GFF7179 0.76 +0.0 43,977 - GFF7179 0.76 +0.4 43,977 - GFF7179 0.76 +1.4 43,977 - GFF7179 0.76 +0.4 44,030 + GFF7179 0.80 -0.1 44,031 - GFF7179 0.80 +0.9 44,031 - GFF7179 0.80 +0.0 44,031 - GFF7179 0.80 -1.9 44,156 + GFF7179 0.89 +0.2 44,156 + GFF7179 0.89 -0.5 44,156 + GFF7179 0.89 +0.6 44,156 + GFF7179 0.89 +0.1 44,156 + GFF7179 0.89 -0.3 44,157 - GFF7179 0.89 +0.0 44,157 - GFF7179 0.89 +0.2 44,157 - GFF7179 0.89 -0.0 44,157 - GFF7179 0.89 -0.8 44,157 - GFF7179 0.89 -0.6 44,157 - GFF7179 0.89 -0.1 44,157 - GFF7179 0.89 -0.8 44,157 - GFF7179 0.89 -0.5 44,157 - GFF7179 0.89 +0.3 44,157 - GFF7179 0.89 +0.9 44,157 - GFF7179 0.89 -1.1 44,157 - GFF7179 0.89 +0.1 44,404 + -0.8 44,404 + -1.9 44,404 + -0.1 44,405 - -0.1 44,405 - -1.3 44,410 + +0.1 44,410 + -0.3 44,410 + -1.4 44,411 - -0.4 44,411 - -0.0 44,411 - +1.1 44,411 - -0.9 44,606 - -0.4 44,617 + -1.3 44,617 + -0.9 44,618 - -0.8 44,641 + +0.0 44,641 + -2.0 44,641 + +0.2 44,641 + -0.3 44,641 + +0.3 44,641 + +1.1 44,642 - -0.1 44,642 - -0.3 44,642 - +0.3 44,642 - -0.2 44,704 + -0.5 44,705 - +1.4 45,135 + GFF7180 0.69 +0.1 45,136 - GFF7180 0.69 -0.4 45,296 + +0.0 45,296 + +1.3 45,296 + -0.2 45,296 + +1.0 45,297 - +0.9 45,297 - -0.1 45,297 - +0.3 45,297 - -0.6 45,297 - -1.4
Or see this region's nucleotide sequence