Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF632 and GFF633 are separated by 1 nucleotides GFF633 and GFF634 are separated by 21 nucleotides GFF634 and GFF635 are separated by 28 nucleotides
GFF632 - Urea ABC transporter, ATPase protein UrtE, at 681,528 to 682,229
GFF632
GFF633 - Urea ABC transporter, ATPase protein UrtD, at 682,231 to 682,974
GFF633
GFF634 - Urea ABC transporter, permease protein UrtC, at 682,996 to 684,186
GFF634
GFF635 - Urea ABC transporter, permease protein UrtB, at 684,215 to 685,129
GFF635
Position (kb) 682
683
684
685 Strain fitness (log2 ratio) -2
-1
0
1 at 682.678 kb on + strand, within GFF633 at 682.679 kb on - strand, within GFF633 at 683.582 kb on + strand, within GFF634 at 683.583 kb on - strand, within GFF634 at 683.592 kb on - strand, within GFF634 at 683.592 kb on - strand, within GFF634 at 683.666 kb on + strand, within GFF634 at 683.732 kb on + strand, within GFF634 at 683.732 kb on + strand, within GFF634 at 683.733 kb on - strand, within GFF634 at 684.053 kb on + strand, within GFF634 at 684.054 kb on - strand, within GFF634 at 684.054 kb on - strand, within GFF634 at 684.062 kb on + strand, within GFF634 at 684.062 kb on + strand, within GFF634 at 684.063 kb on - strand, within GFF634 at 684.424 kb on - strand, within GFF635 at 684.424 kb on - strand, within GFF635 at 684.825 kb on + strand, within GFF635 at 684.826 kb on - strand, within GFF635 at 684.909 kb on + strand, within GFF635 at 684.910 kb on - strand, within GFF635 at 684.910 kb on - strand, within GFF635 at 684.913 kb on - strand, within GFF635 at 684.960 kb on + strand, within GFF635 at 684.961 kb on - strand, within GFF635 at 684.970 kb on - strand, within GFF635
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 682,678 + GFF633 0.60 +0.1 682,679 - GFF633 0.60 +0.2 683,582 + GFF634 0.49 -0.2 683,583 - GFF634 0.49 +0.2 683,592 - GFF634 0.50 +0.4 683,592 - GFF634 0.50 +0.2 683,666 + GFF634 0.56 -0.1 683,732 + GFF634 0.62 +0.3 683,732 + GFF634 0.62 +0.5 683,733 - GFF634 0.62 -0.0 684,053 + GFF634 0.89 -1.0 684,054 - GFF634 0.89 -0.5 684,054 - GFF634 0.89 -2.0 684,062 + GFF634 0.90 -0.2 684,062 + GFF634 0.90 -0.3 684,063 - GFF634 0.90 +0.8 684,424 - GFF635 0.23 -0.7 684,424 - GFF635 0.23 -0.8 684,825 + GFF635 0.67 -0.6 684,826 - GFF635 0.67 +0.7 684,909 + GFF635 0.76 -0.3 684,910 - GFF635 0.76 +0.4 684,910 - GFF635 0.76 +0.4 684,913 - GFF635 0.76 -0.2 684,960 + GFF635 0.81 -0.2 684,961 - GFF635 0.82 -0.1 684,970 - GFF635 0.83 -0.6
Or see this region's nucleotide sequence