Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5762 and GFF5763 are separated by 50 nucleotides GFF5763 and GFF5764 are separated by 19 nucleotides
GFF5762 - Flagellar motor rotation protein MotB, at 133,569 to 134,534
GFF5762
GFF5763 - Signal transduction histidine kinase CheA, at 134,585 to 136,681
GFF5763
GFF5764 - hypothetical protein, at 136,701 to 138,008
GFF5764
Position (kb) 134
135
136
137 Strain fitness (log2 ratio) -1
0
1
2 at 133.656 kb on + strand at 133.657 kb on - strand at 133.657 kb on - strand at 134.158 kb on - strand, within GFF5762 at 134.158 kb on - strand, within GFF5762 at 134.532 kb on + strand at 134.892 kb on - strand, within GFF5763 at 134.892 kb on - strand, within GFF5763 at 135.579 kb on - strand, within GFF5763 at 135.579 kb on - strand, within GFF5763 at 135.579 kb on - strand, within GFF5763 at 135.671 kb on + strand, within GFF5763 at 135.671 kb on + strand, within GFF5763 at 135.671 kb on + strand, within GFF5763 at 135.671 kb on + strand, within GFF5763 at 135.672 kb on - strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.746 kb on + strand, within GFF5763 at 135.747 kb on - strand, within GFF5763 at 135.747 kb on - strand, within GFF5763 at 136.250 kb on + strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.251 kb on - strand, within GFF5763 at 136.268 kb on + strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.269 kb on - strand, within GFF5763 at 136.520 kb on + strand at 136.520 kb on + strand at 136.520 kb on + strand at 136.806 kb on + strand at 137.231 kb on - strand, within GFF5764 at 137.490 kb on + strand, within GFF5764 at 137.491 kb on - strand, within GFF5764 at 137.505 kb on + strand, within GFF5764 at 137.506 kb on - strand, within GFF5764 at 137.589 kb on + strand, within GFF5764
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 133,656 + -0.1 133,657 - -0.3 133,657 - -0.2 134,158 - GFF5762 0.61 +0.0 134,158 - GFF5762 0.61 +1.8 134,532 + +0.2 134,892 - GFF5763 0.15 +1.0 134,892 - GFF5763 0.15 -0.3 135,579 - GFF5763 0.47 +0.2 135,579 - GFF5763 0.47 +1.6 135,579 - GFF5763 0.47 -0.8 135,671 + GFF5763 0.52 +0.6 135,671 + GFF5763 0.52 +0.1 135,671 + GFF5763 0.52 -0.4 135,671 + GFF5763 0.52 +0.1 135,672 - GFF5763 0.52 -0.6 135,746 + GFF5763 0.55 +1.8 135,746 + GFF5763 0.55 +0.5 135,746 + GFF5763 0.55 -1.0 135,746 + GFF5763 0.55 +0.4 135,746 + GFF5763 0.55 -1.4 135,747 - GFF5763 0.55 -0.2 135,747 - GFF5763 0.55 -0.2 136,250 + GFF5763 0.79 +0.1 136,251 - GFF5763 0.79 +0.1 136,251 - GFF5763 0.79 +0.2 136,251 - GFF5763 0.79 -1.5 136,251 - GFF5763 0.79 +0.9 136,268 + GFF5763 0.80 -0.5 136,269 - GFF5763 0.80 -0.2 136,269 - GFF5763 0.80 -0.4 136,269 - GFF5763 0.80 +0.4 136,269 - GFF5763 0.80 +0.2 136,520 + -0.5 136,520 + +0.7 136,520 + -0.2 136,806 + +2.6 137,231 - GFF5764 0.41 -0.5 137,490 + GFF5764 0.60 -0.2 137,491 - GFF5764 0.60 -0.8 137,505 + GFF5764 0.61 -0.2 137,506 - GFF5764 0.62 -1.2 137,589 + GFF5764 0.68 +1.1
Or see this region's nucleotide sequence