Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5592 and GFF5593 overlap by 4 nucleotides GFF5593 and GFF5594 overlap by 4 nucleotides
GFF5592 - Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family, at 212,709 to 213,767
GFF5592
GFF5593 - no description, at 213,764 to 214,567
GFF5593
GFF5594 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 214,564 to 215,640
GFF5594
Position (kb) 213
214
215 Strain fitness (log2 ratio) -1
0
1 at 212.809 kb on - strand at 213.809 kb on + strand at 213.908 kb on + strand, within GFF5593 at 213.908 kb on + strand, within GFF5593 at 213.909 kb on - strand, within GFF5593 at 214.016 kb on + strand, within GFF5593 at 214.017 kb on - strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.115 kb on + strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.116 kb on - strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.448 kb on + strand, within GFF5593 at 214.449 kb on - strand, within GFF5593 at 214.449 kb on - strand, within GFF5593 at 214.449 kb on - strand, within GFF5593 at 214.570 kb on + strand at 214.570 kb on + strand at 214.570 kb on + strand at 214.570 kb on + strand at 214.571 kb on - strand at 214.571 kb on - strand at 214.571 kb on - strand at 214.571 kb on - strand at 214.571 kb on - strand at 214.571 kb on - strand at 214.600 kb on + strand at 214.601 kb on - strand at 214.601 kb on - strand at 214.814 kb on - strand, within GFF5594 at 214.814 kb on - strand, within GFF5594 at 215.227 kb on + strand, within GFF5594 at 215.227 kb on + strand, within GFF5594 at 215.227 kb on + strand, within GFF5594 at 215.227 kb on + strand, within GFF5594 at 215.227 kb on + strand, within GFF5594 at 215.227 kb on + strand, within GFF5594 at 215.228 kb on - strand, within GFF5594 at 215.228 kb on - strand, within GFF5594 at 215.260 kb on + strand, within GFF5594 at 215.461 kb on + strand, within GFF5594 at 215.461 kb on + strand, within GFF5594 at 215.461 kb on + strand, within GFF5594 at 215.461 kb on + strand, within GFF5594 at 215.462 kb on - strand, within GFF5594 at 215.462 kb on - strand, within GFF5594 at 215.462 kb on - strand, within GFF5594
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 212,809 - -0.5 213,809 + +0.0 213,908 + GFF5593 0.18 -0.2 213,908 + GFF5593 0.18 +0.1 213,909 - GFF5593 0.18 -0.3 214,016 + GFF5593 0.31 +1.1 214,017 - GFF5593 0.31 -0.1 214,115 + GFF5593 0.44 -0.0 214,115 + GFF5593 0.44 +0.1 214,115 + GFF5593 0.44 +1.4 214,115 + GFF5593 0.44 +0.8 214,115 + GFF5593 0.44 -0.0 214,115 + GFF5593 0.44 +0.1 214,115 + GFF5593 0.44 -1.7 214,116 - GFF5593 0.44 +0.5 214,116 - GFF5593 0.44 -0.4 214,116 - GFF5593 0.44 -0.4 214,116 - GFF5593 0.44 -0.0 214,116 - GFF5593 0.44 -0.6 214,116 - GFF5593 0.44 +0.2 214,116 - GFF5593 0.44 -0.5 214,116 - GFF5593 0.44 +1.4 214,116 - GFF5593 0.44 -0.6 214,116 - GFF5593 0.44 -0.7 214,448 + GFF5593 0.85 +0.2 214,448 + GFF5593 0.85 -1.0 214,448 + GFF5593 0.85 -0.6 214,448 + GFF5593 0.85 -0.1 214,448 + GFF5593 0.85 -0.2 214,448 + GFF5593 0.85 -0.4 214,448 + GFF5593 0.85 -0.9 214,449 - GFF5593 0.85 -0.9 214,449 - GFF5593 0.85 +0.2 214,449 - GFF5593 0.85 -0.0 214,570 + +0.7 214,570 + +0.1 214,570 + -0.0 214,570 + -0.8 214,571 - -0.1 214,571 - +0.3 214,571 - -0.3 214,571 - +0.1 214,571 - +0.2 214,571 - -1.7 214,600 + +0.1 214,601 - -0.8 214,601 - -0.6 214,814 - GFF5594 0.23 -0.8 214,814 - GFF5594 0.23 -0.7 215,227 + GFF5594 0.62 -1.7 215,227 + GFF5594 0.62 +0.4 215,227 + GFF5594 0.62 -0.1 215,227 + GFF5594 0.62 -1.6 215,227 + GFF5594 0.62 -0.8 215,227 + GFF5594 0.62 +1.1 215,228 - GFF5594 0.62 +0.6 215,228 - GFF5594 0.62 +0.5 215,260 + GFF5594 0.65 -0.6 215,461 + GFF5594 0.83 -0.4 215,461 + GFF5594 0.83 -1.3 215,461 + GFF5594 0.83 -0.6 215,461 + GFF5594 0.83 -0.1 215,462 - GFF5594 0.83 -0.8 215,462 - GFF5594 0.83 -0.5 215,462 - GFF5594 0.83 -1.5
Or see this region's nucleotide sequence