Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3163 and GFF3164 are separated by 26 nucleotides GFF3164 and GFF3165 overlap by 4 nucleotides
GFF3163 - Transcriptional regulator, IclR family, at 602,292 to 603,125
GFF3163
GFF3164 - Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2), at 603,152 to 604,135
GFF3164
GFF3165 - Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2), at 604,132 to 605,868
GFF3165
Position (kb) 603
604
605 Strain fitness (log2 ratio) -2
-1
0
1 at 602.216 kb on + strand at 602.217 kb on - strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.291 kb on + strand at 602.526 kb on + strand, within GFF3163 at 602.676 kb on + strand, within GFF3163 at 602.676 kb on + strand, within GFF3163 at 602.716 kb on - strand, within GFF3163 at 602.832 kb on + strand, within GFF3163 at 602.833 kb on - strand, within GFF3163 at 602.833 kb on - strand, within GFF3163 at 603.281 kb on + strand, within GFF3164 at 603.282 kb on - strand, within GFF3164 at 603.282 kb on - strand, within GFF3164 at 603.569 kb on + strand, within GFF3164 at 603.569 kb on + strand, within GFF3164 at 603.654 kb on - strand, within GFF3164 at 603.732 kb on - strand, within GFF3164 at 603.798 kb on - strand, within GFF3164 at 604.966 kb on + strand, within GFF3165 at 604.966 kb on + strand, within GFF3165
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 602,216 + +1.1 602,217 - -0.6 602,218 + -1.3 602,218 + -0.0 602,218 + +0.9 602,218 + -0.5 602,218 + -0.8 602,218 + -0.3 602,219 - -1.3 602,219 - -0.6 602,219 - +0.3 602,219 - -1.4 602,219 - -1.1 602,219 - +0.4 602,219 - -1.4 602,219 - -0.1 602,291 + -0.8 602,526 + GFF3163 0.28 +0.2 602,676 + GFF3163 0.46 -0.8 602,676 + GFF3163 0.46 -0.2 602,716 - GFF3163 0.51 +0.1 602,832 + GFF3163 0.65 -0.3 602,833 - GFF3163 0.65 +0.8 602,833 - GFF3163 0.65 -0.0 603,281 + GFF3164 0.13 -0.7 603,282 - GFF3164 0.13 -2.1 603,282 - GFF3164 0.13 -0.5 603,569 + GFF3164 0.42 -0.2 603,569 + GFF3164 0.42 -1.9 603,654 - GFF3164 0.51 -0.2 603,732 - GFF3164 0.59 +0.2 603,798 - GFF3164 0.66 -0.0 604,966 + GFF3165 0.48 +0.4 604,966 + GFF3165 0.48 -0.6
Or see this region's nucleotide sequence