Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
GFF2613 - no description, at 18,766 to 18,894
GFF2613
Position (kb) 18
19 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.800 kb on - strand at 17.853 kb on + strand at 17.998 kb on + strand at 17.999 kb on - strand at 18.026 kb on - strand at 18.026 kb on - strand at 18.070 kb on + strand at 18.144 kb on + strand at 18.144 kb on + strand at 18.145 kb on - strand at 18.185 kb on + strand at 18.186 kb on - strand at 18.186 kb on - strand at 18.186 kb on - strand at 18.231 kb on + strand at 18.231 kb on + strand at 18.232 kb on - strand at 18.232 kb on - strand at 18.249 kb on - strand at 18.266 kb on + strand at 18.267 kb on - strand at 18.267 kb on - strand at 18.312 kb on - strand at 18.445 kb on + strand at 18.445 kb on + strand at 18.544 kb on - strand at 18.565 kb on - strand at 18.565 kb on - strand at 18.568 kb on + strand at 18.591 kb on + strand at 18.591 kb on + strand at 18.591 kb on + strand at 18.591 kb on + strand at 18.592 kb on - strand at 18.592 kb on - strand at 18.664 kb on + strand at 18.665 kb on - strand at 18.696 kb on + strand at 18.696 kb on + strand at 18.697 kb on - strand at 18.697 kb on - strand at 18.719 kb on - strand at 18.760 kb on + strand at 18.760 kb on + strand at 18.760 kb on + strand at 18.760 kb on + strand at 18.760 kb on + strand at 18.761 kb on - strand at 18.761 kb on - strand at 18.767 kb on + strand at 18.767 kb on + strand at 18.767 kb on + strand at 18.767 kb on + strand at 18.769 kb on + strand at 18.769 kb on + strand at 18.861 kb on - strand, within GFF2613 at 18.869 kb on + strand, within GFF2613 at 18.870 kb on - strand, within GFF2613 at 18.870 kb on - strand, within GFF2613 at 18.896 kb on + strand at 18.915 kb on - strand at 18.960 kb on - strand at 18.960 kb on - strand at 18.960 kb on - strand at 18.960 kb on - strand at 19.016 kb on + strand at 19.016 kb on + strand at 19.016 kb on + strand at 19.017 kb on - strand at 19.017 kb on - strand at 19.044 kb on - strand at 19.058 kb on - strand at 19.063 kb on + strand at 19.105 kb on + strand at 19.105 kb on + strand at 19.105 kb on + strand at 19.106 kb on - strand at 19.106 kb on - strand at 19.106 kb on - strand at 19.112 kb on + strand at 19.112 kb on + strand at 19.113 kb on - strand at 19.113 kb on - strand at 19.113 kb on - strand at 19.113 kb on - strand at 19.139 kb on + strand at 19.139 kb on + strand at 19.312 kb on + strand at 19.359 kb on - strand at 19.393 kb on + strand at 19.393 kb on + strand at 19.393 kb on + strand at 19.393 kb on + strand at 19.394 kb on - strand at 19.394 kb on - strand at 19.394 kb on - strand at 19.394 kb on - strand at 19.422 kb on + strand at 19.422 kb on + strand at 19.422 kb on + strand at 19.423 kb on - strand at 19.423 kb on - strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.462 kb on + strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.463 kb on - strand at 19.464 kb on + strand at 19.464 kb on + strand at 19.464 kb on + strand at 19.464 kb on + strand at 19.465 kb on - strand at 19.465 kb on - strand at 19.465 kb on - strand at 19.465 kb on - strand at 19.485 kb on + strand at 19.485 kb on + strand at 19.486 kb on - strand at 19.505 kb on + strand at 19.505 kb on + strand at 19.506 kb on - strand at 19.506 kb on - strand at 19.506 kb on - strand at 19.506 kb on - strand at 19.509 kb on + strand at 19.509 kb on + strand at 19.510 kb on - strand at 19.510 kb on - strand at 19.614 kb on - strand at 19.614 kb on - strand at 19.614 kb on - strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.622 kb on + strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.623 kb on - strand at 19.625 kb on + strand at 19.625 kb on + strand at 19.626 kb on - strand at 19.626 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.641 kb on - strand at 19.668 kb on - strand at 19.668 kb on - strand at 19.668 kb on - strand at 19.668 kb on - strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.754 kb on + strand at 19.798 kb on + strand at 19.798 kb on + strand at 19.798 kb on + strand at 19.799 kb on - strand at 19.805 kb on + strand at 19.805 kb on + strand at 19.806 kb on - strand at 19.806 kb on - strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.825 kb on + strand at 19.826 kb on - strand at 19.826 kb on - strand at 19.826 kb on - strand at 19.884 kb on + strand at 19.885 kb on - strand at 19.885 kb on - strand at 19.885 kb on - strand at 19.885 kb on - strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.891 kb on + strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand at 19.892 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 17,800 - +0.2 17,853 + +1.0 17,998 + -0.4 17,999 - -0.3 18,026 - +0.5 18,026 - -1.3 18,070 + -0.2 18,144 + -0.6 18,144 + +0.1 18,145 - +0.0 18,185 + +1.1 18,186 - +0.4 18,186 - +0.2 18,186 - -0.7 18,231 + -0.6 18,231 + -0.0 18,232 - -0.4 18,232 - +0.1 18,249 - +0.9 18,266 + -0.9 18,267 - +0.4 18,267 - +1.0 18,312 - -0.0 18,445 + -0.8 18,445 + -0.2 18,544 - +1.1 18,565 - -0.8 18,565 - -1.6 18,568 + -0.0 18,591 + -0.6 18,591 + +0.3 18,591 + -0.3 18,591 + +0.5 18,592 - +0.4 18,592 - -0.8 18,664 + -0.3 18,665 - -0.6 18,696 + -0.3 18,696 + -0.8 18,697 - +0.5 18,697 - +1.3 18,719 - -0.5 18,760 + +1.1 18,760 + +1.8 18,760 + +0.3 18,760 + +0.4 18,760 + -0.4 18,761 - +0.2 18,761 - +0.4 18,767 + -0.4 18,767 + -0.8 18,767 + +0.3 18,767 + -0.2 18,769 + +0.2 18,769 + -2.4 18,861 - GFF2613 0.74 -1.2 18,869 + GFF2613 0.80 +0.4 18,870 - GFF2613 0.81 +0.2 18,870 - GFF2613 0.81 -0.3 18,896 + +1.0 18,915 - -0.6 18,960 - -0.3 18,960 - -1.6 18,960 - +0.2 18,960 - +0.8 19,016 + -0.6 19,016 + -0.5 19,016 + -1.1 19,017 - -0.5 19,017 - +0.2 19,044 - +0.8 19,058 - -0.6 19,063 + -0.2 19,105 + -0.1 19,105 + +1.2 19,105 + +1.0 19,106 - +0.4 19,106 - -0.5 19,106 - -0.4 19,112 + -0.9 19,112 + -0.3 19,113 - +0.2 19,113 - -0.6 19,113 - +0.2 19,113 - +0.1 19,139 + +0.1 19,139 + -0.1 19,312 + +0.2 19,359 - -0.5 19,393 + -0.1 19,393 + +1.0 19,393 + -0.4 19,393 + +1.0 19,394 - +2.1 19,394 - -0.3 19,394 - -0.4 19,394 - -0.1 19,422 + +0.8 19,422 + +0.5 19,422 + -0.1 19,423 - -0.9 19,423 - -1.0 19,462 + -0.6 19,462 + +0.2 19,462 + +0.4 19,462 + -0.1 19,462 + -1.2 19,462 + -0.1 19,463 - +0.8 19,463 - +0.4 19,463 - +0.0 19,463 - -0.5 19,463 - -0.8 19,464 + +0.3 19,464 + +0.3 19,464 + +0.8 19,464 + +0.0 19,465 - -0.2 19,465 - -0.4 19,465 - +0.1 19,465 - -0.2 19,485 + -0.2 19,485 + +0.2 19,486 - -0.2 19,505 + +2.5 19,505 + -0.1 19,506 - -0.9 19,506 - -1.8 19,506 - -0.2 19,506 - +0.0 19,509 + +2.4 19,509 + -0.6 19,510 - +0.2 19,510 - -1.2 19,614 - -0.0 19,614 - +0.1 19,614 - +0.1 19,622 + -1.2 19,622 + +0.2 19,622 + +0.2 19,622 + +0.6 19,622 + +0.3 19,622 + +1.0 19,622 + -0.6 19,622 + +2.6 19,622 + -0.2 19,622 + -0.7 19,622 + -0.2 19,622 + -0.6 19,623 - +0.8 19,623 - -0.5 19,623 - -1.4 19,623 - -1.1 19,623 - -0.8 19,623 - -0.2 19,623 - -0.0 19,623 - -0.9 19,623 - +0.3 19,623 - -1.3 19,623 - -0.0 19,625 + -0.7 19,625 + +0.8 19,626 - -0.1 19,626 - -0.0 19,641 - +0.5 19,641 - -0.9 19,641 - -0.6 19,641 - +1.3 19,641 - +0.2 19,641 - -0.0 19,641 - -0.2 19,668 - -0.2 19,668 - -1.1 19,668 - -0.2 19,668 - -0.4 19,754 + +0.8 19,754 + -0.9 19,754 + +0.2 19,754 + -0.8 19,754 + -0.0 19,754 + -0.3 19,754 + -0.1 19,754 + -0.1 19,754 + -0.1 19,754 + +0.2 19,754 + -0.1 19,754 + -0.4 19,754 + -1.0 19,754 + -0.9 19,754 + +0.2 19,798 + +1.4 19,798 + -0.2 19,798 + -2.4 19,799 - -0.2 19,805 + -0.6 19,805 + +0.6 19,806 - -0.3 19,806 - -0.8 19,825 + +2.4 19,825 + -0.5 19,825 + -0.8 19,825 + -0.5 19,825 + -0.3 19,825 + +0.8 19,825 + +0.0 19,825 + -0.5 19,825 + -1.4 19,825 + +0.9 19,825 + +0.1 19,826 - +0.5 19,826 - +0.9 19,826 - -1.0 19,884 + -0.5 19,885 - +0.3 19,885 - +0.3 19,885 - -0.1 19,885 - +0.1 19,891 + +0.2 19,891 + -0.5 19,891 + +0.0 19,891 + +0.1 19,891 + -2.2 19,891 + +1.0 19,891 + +0.3 19,891 + -1.4 19,891 + +0.1 19,891 + -0.9 19,891 + +1.8 19,891 + +1.2 19,891 + -0.1 19,891 + -0.5 19,891 + +0.0 19,891 + +0.0 19,891 + +0.4 19,892 - +0.1 19,892 - -1.0 19,892 - +1.2 19,892 - -0.4 19,892 - -1.3 19,892 - -0.4 19,892 - +0.8 19,892 - -0.9
Or see this region's nucleotide sequence