Strain Fitness in Variovorax sp. SCN45 around GFF801

Experiment: phage_bap4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage_bap4
106,029	+		GFF800	0.54	-0.6
106,029	+		GFF800	0.54	+0.3
106,029	+		GFF800	0.54	+0.1
106,029	+		GFF800	0.54	+0.9
106,029	+		GFF800	0.54	-0.1
106,029	+		GFF800	0.54	-1.0
106,029	+		GFF800	0.54	-0.1
106,029	+		GFF800	0.54	+0.6
106,029	+		GFF800	0.54	-0.8
106,030	-		GFF800	0.54	+0.0
106,030	-		GFF800	0.54	+0.2
106,030	-		GFF800	0.54	+0.3
106,030	-		GFF800	0.54	-0.5
106,030	-		GFF800	0.54	-0.9
106,030	-		GFF800	0.54	-0.2
106,030	-		GFF800	0.54	+0.0
106,065	+		GFF800	0.56	-2.2
106,066	-		GFF800	0.56	-0.6
106,066	-		GFF800	0.56	-0.1
106,066	-		GFF800	0.56	-0.6
106,184	+		GFF800	0.62	+1.3
106,185	-		GFF800	0.62	-0.3
106,186	+		GFF800	0.62	+0.6
106,255	+		GFF800	0.66	-1.9
106,255	+		GFF800	0.66	+0.5
106,255	+		GFF800	0.66	+0.0
106,255	+		GFF800	0.66	+0.0
106,256	-		GFF800	0.66	-1.1
106,256	-		GFF800	0.66	-0.1
106,395	+		GFF800	0.73	-0.1
106,395	+		GFF800	0.73	-0.8
106,395	+		GFF800	0.73	-0.3
106,395	+		GFF800	0.73	-0.9
106,395	+		GFF800	0.73	+1.0
106,395	+		GFF800	0.73	-0.5
106,395	+		GFF800	0.73	-1.1
106,395	+		GFF800	0.73	-0.7
106,395	+		GFF800	0.73	+0.0
106,395	+		GFF800	0.73	-0.5
106,395	+		GFF800	0.73	-0.6
106,395	+		GFF800	0.73	-1.1
106,395	+		GFF800	0.73	-0.7
106,395	+		GFF800	0.73	-0.2
106,396	-		GFF800	0.73	+0.2
106,396	-		GFF800	0.73	-0.1
106,396	-		GFF800	0.73	+0.2
106,396	-		GFF800	0.73	-1.4
106,396	-		GFF800	0.73	-0.2
106,396	-		GFF800	0.73	-0.4
106,396	-		GFF800	0.73	-0.1
106,396	-		GFF800	0.73	+0.5
106,396	-		GFF800	0.73	-0.8
106,396	-		GFF800	0.73	+0.0
106,396	-		GFF800	0.73	+1.6
106,398	+		GFF800	0.73	-1.2
106,398	+		GFF800	0.73	-0.4
106,398	+		GFF800	0.73	-0.6
106,398	+		GFF800	0.73	-0.3
106,398	+		GFF800	0.73	-0.2
106,398	+		GFF800	0.73	-1.2
106,398	+		GFF800	0.73	-0.6
106,398	+		GFF800	0.73	-2.2
106,398	+		GFF800	0.73	+0.1
106,398	+		GFF800	0.73	-1.3
106,398	+		GFF800	0.73	-0.6
106,398	+		GFF800	0.73	+0.7
106,399	-		GFF800	0.74	+1.0
106,399	-		GFF800	0.74	-0.1
106,399	-		GFF800	0.74	-0.4
106,399	-		GFF800	0.74	-1.0
106,399	-		GFF800	0.74	-0.4
106,399	-		GFF800	0.74	+0.0
106,399	-		GFF800	0.74	-0.8
106,399	-		GFF800	0.74	+0.6
106,399	-		GFF800	0.74	+0.1
106,399	-		GFF800	0.74	-0.5
106,401	+		GFF800	0.74	-0.6
106,401	+		GFF800	0.74	+0.0
106,401	+		GFF800	0.74	-0.8
106,401	+		GFF800	0.74	-0.1
106,401	+		GFF800	0.74	-0.5
106,401	+		GFF800	0.74	+0.3
106,401	+		GFF800	0.74	+0.8
106,401	+		GFF800	0.74	-1.5
106,401	+		GFF800	0.74	+0.2
106,401	+		GFF800	0.74	+2.1
106,401	+		GFF800	0.74	-0.2
106,401	+		GFF800	0.74	+0.3
106,402	-		GFF800	0.74	+0.4
106,402	-		GFF800	0.74	-0.3
106,402	-		GFF800	0.74	-0.0
106,402	-		GFF800	0.74	-0.5
106,402	-		GFF800	0.74	-0.2
106,402	-		GFF800	0.74	-1.2
106,402	-		GFF800	0.74	-1.5
106,402	-		GFF800	0.74	+0.6
106,402	-		GFF800	0.74	+0.3
106,402	-		GFF800	0.74	-0.2
106,402	-		GFF800	0.74	+0.3
106,482	+		GFF800	0.78	-0.4
106,482	+		GFF800	0.78	+0.5
106,482	+		GFF800	0.78	+1.3
106,482	+		GFF800	0.78	-1.2
106,483	-		GFF800	0.78	+0.3
106,483	-		GFF800	0.78	-0.5
106,483	-		GFF800	0.78	-0.4
106,483	-		GFF800	0.78	-0.2
106,483	-		GFF800	0.78	+0.5
106,548	+		GFF800	0.81	-0.2
106,548	+		GFF800	0.81	-0.2
106,549	-		GFF800	0.81	-1.3
106,549	-		GFF800	0.81	-0.4
106,549	-		GFF800	0.81	+0.5
106,641	+		GFF800	0.86	-0.2
106,641	-		GFF800	0.86	-0.1
106,642	-		GFF800	0.86	+0.3
106,642	-		GFF800	0.86	+0.2
106,642	-		GFF800	0.86	-0.7
106,642	-		GFF800	0.86	+0.2
106,642	-		GFF800	0.86	+0.0
106,795	-				-0.3
106,795	-				-0.1
106,824	+				-1.1
106,825	-				+0.1
106,848	+				-0.7
106,848	+				+1.9
106,848	+				-0.7
106,849	-				-0.5
106,849	-				+1.2
106,849	-				+0.0
106,849	-				+0.8
106,849	-				-1.0
106,849	-				+0.5
106,849	-				-0.4
106,849	-				-1.0
106,849	-				-0.2
106,849	-				-0.4
106,989	+				-0.5
106,990	-				-1.9
106,990	-				-0.5
107,016	+				-0.4
107,016	+				-0.5
107,016	+				+0.6
107,016	+				-0.3
107,017	-				-1.1
107,017	-				-0.1
107,164	-		GFF801	0.34	-0.6
107,164	-		GFF801	0.34	-0.3
107,211	+		GFF801	0.43	+1.2
107,212	-		GFF801	0.43	+0.7
107,212	-		GFF801	0.43	-0.5
107,235	+		GFF801	0.48	-0.5
107,235	+		GFF801	0.48	-0.5
107,235	+		GFF801	0.48	-0.6
107,235	+		GFF801	0.48	-0.7
107,235	+		GFF801	0.48	-1.5
107,235	+		GFF801	0.48	+0.1
107,235	+		GFF801	0.48	-0.8
107,235	+		GFF801	0.48	-1.0
107,235	+		GFF801	0.48	-0.6
107,235	+		GFF801	0.48	+1.3
107,235	+		GFF801	0.48	-0.5
107,235	+		GFF801	0.48	-0.3
107,236	-		GFF801	0.48	-0.0
107,236	-		GFF801	0.48	-0.4
107,236	-		GFF801	0.48	-1.1
107,236	-		GFF801	0.48	-0.8
107,236	-		GFF801	0.48	+1.0
107,236	-		GFF801	0.48	-0.5
107,236	-		GFF801	0.48	+0.1
107,236	-		GFF801	0.48	-1.0
107,236	-		GFF801	0.48	+1.6
107,590	+				-1.0
107,590	+				+0.6
107,590	+				-0.6
107,591	-				-1.3
107,591	-				-0.2
107,591	-				-0.3
107,630	+				+1.5
107,630	+				-0.3
107,631	-				-1.2
107,631	-				+0.3
107,631	-				-0.2
107,631	-				+0.3
107,714	+		GFF802	0.17	+0.5
107,714	+		GFF802	0.17	+2.6
107,714	+		GFF802	0.17	-0.3
107,715	-		GFF802	0.18	-0.5
107,715	-		GFF802	0.18	-1.5
107,715	-		GFF802	0.18	+0.6
107,723	+		GFF802	0.19	-0.2
107,723	+		GFF802	0.19	-0.3
107,723	+		GFF802	0.19	-0.2
107,723	+		GFF802	0.19	+0.5
107,723	+		GFF802	0.19	-1.4
107,723	+		GFF802	0.19	+0.0
107,724	-		GFF802	0.19	-0.5
107,724	-		GFF802	0.19	-1.1
107,724	-		GFF802	0.19	-0.6
107,724	-		GFF802	0.19	-0.7
107,801	+		GFF802	0.35	+1.4
107,801	+		GFF802	0.35	-0.1
107,801	+		GFF802	0.35	-0.1
107,801	+		GFF802	0.35	-0.6
107,801	+		GFF802	0.35	-1.2
107,802	-		GFF802	0.35	+0.2
107,802	-		GFF802	0.35	-0.7
107,936	+		GFF802	0.63	-0.1
107,936	+		GFF802	0.63	+0.2
107,936	+		GFF802	0.63	-0.7
107,936	+		GFF802	0.63	+0.6
107,936	+		GFF802	0.63	+1.0
107,936	+		GFF802	0.63	+0.3
107,936	+		GFF802	0.63	-0.1
107,936	+		GFF802	0.63	-0.8
107,936	+		GFF802	0.63	-0.2
107,936	+		GFF802	0.63	-2.1
107,936	+		GFF802	0.63	+0.9
107,936	+		GFF802	0.63	+0.4
107,936	+		GFF802	0.63	-0.5
107,936	+		GFF802	0.63	-0.5
107,936	+		GFF802	0.63	-0.2
107,937	-		GFF802	0.63	+0.4
107,937	-		GFF802	0.63	+0.6
107,937	-		GFF802	0.63	-0.4
107,937	-		GFF802	0.63	+0.4
107,937	-		GFF802	0.63	-0.3
107,937	-		GFF802	0.63	+0.6
107,937	-		GFF802	0.63	-0.1
107,937	-		GFF802	0.63	-0.2
107,937	-		GFF802	0.63	-0.2
107,937	-		GFF802	0.63	-0.4
107,937	-		GFF802	0.63	+0.6
107,937	-		GFF802	0.63	+0.0
107,937	-		GFF802	0.63	-0.1
107,937	-		GFF802	0.63	+1.6
107,937	-		GFF802	0.63	-0.2
107,937	-		GFF802	0.63	+0.5
107,937	-		GFF802	0.63	-0.1
107,969	+		GFF802	0.70	+1.4
107,969	+		GFF802	0.70	-0.2
107,969	+		GFF802	0.70	-0.4
107,969	+		GFF802	0.70	+0.0
107,970	-		GFF802	0.70	-0.4
107,970	-		GFF802	0.70	-0.3
107,970	-		GFF802	0.70	+1.5
107,977	+		GFF802	0.71	-1.8
107,977	+		GFF802	0.71	-1.0
107,977	+		GFF802	0.71	+0.9
107,978	-		GFF802	0.71	+0.6
107,978	-		GFF802	0.71	+0.9
107,978	-		GFF802	0.71	+0.0
107,978	-		GFF802	0.71	-0.7
108,190	+		GFF803	0.11	-1.3
108,190	+		GFF803	0.11	-0.5
108,190	+		GFF803	0.11	+0.7
108,190	+		GFF803	0.11	+0.0
108,191	-		GFF803	0.11	+0.6
108,191	-		GFF803	0.11	+0.0
108,191	-		GFF803	0.11	-0.7
108,319	+		GFF803	0.34	+0.2
108,319	+		GFF803	0.34	-0.7
108,319	+		GFF803	0.34	+0.1