Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7364 and GFF7365 are separated by 26 nucleotides GFF7365 and GFF7366 are separated by 1 nucleotides GFF7366 and GFF7367 are separated by 425 nucleotides GFF7367 and GFF7368 overlap by 37 nucleotides GFF7368 and GFF7369 are separated by 63 nucleotides
GFF7364 - no description, at 11,406 to 12,509
GFF7364
GFF7365 - no description, at 12,536 to 13,021
GFF7365
GFF7366 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 13,023 to 14,591
GFF7366
GFF7367 - Enoyl-CoA hydratase (EC 4.2.1.17), at 15,017 to 15,208
GFF7367
GFF7368 - Enoyl-CoA hydratase (EC 4.2.1.17), at 15,172 to 15,474
GFF7368
GFF7369 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 15,538 to 16,722
GFF7369
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 12.169 kb on + strand, within GFF7364 at 12.264 kb on + strand, within GFF7364 at 12.265 kb on - strand, within GFF7364 at 12.367 kb on + strand, within GFF7364 at 12.368 kb on - strand, within GFF7364 at 12.599 kb on + strand, within GFF7365 at 12.599 kb on + strand, within GFF7365 at 12.600 kb on - strand, within GFF7365 at 12.600 kb on - strand, within GFF7365 at 12.772 kb on - strand, within GFF7365 at 12.879 kb on + strand, within GFF7365 at 12.879 kb on + strand, within GFF7365 at 12.879 kb on + strand, within GFF7365 at 12.880 kb on - strand, within GFF7365 at 13.363 kb on + strand, within GFF7366 at 13.388 kb on - strand, within GFF7366 at 13.477 kb on + strand, within GFF7366 at 13.477 kb on + strand, within GFF7366 at 13.477 kb on + strand, within GFF7366 at 13.478 kb on - strand, within GFF7366 at 13.478 kb on - strand, within GFF7366 at 13.481 kb on - strand, within GFF7366 at 13.481 kb on - strand, within GFF7366 at 13.690 kb on + strand, within GFF7366 at 13.690 kb on + strand, within GFF7366 at 13.690 kb on + strand, within GFF7366 at 13.690 kb on + strand, within GFF7366 at 13.691 kb on - strand, within GFF7366 at 13.691 kb on - strand, within GFF7366 at 13.691 kb on - strand, within GFF7366 at 13.692 kb on + strand, within GFF7366 at 13.692 kb on + strand, within GFF7366 at 13.692 kb on + strand, within GFF7366 at 13.692 kb on + strand, within GFF7366 at 13.693 kb on - strand, within GFF7366 at 13.693 kb on - strand, within GFF7366 at 13.769 kb on - strand, within GFF7366 at 13.996 kb on + strand, within GFF7366 at 13.996 kb on + strand, within GFF7366 at 13.997 kb on - strand, within GFF7366 at 14.093 kb on + strand, within GFF7366 at 14.108 kb on - strand, within GFF7366 at 14.182 kb on + strand, within GFF7366 at 14.335 kb on + strand, within GFF7366 at 14.335 kb on + strand, within GFF7366 at 14.524 kb on + strand at 14.524 kb on + strand at 14.524 kb on + strand at 14.524 kb on + strand at 14.525 kb on - strand at 14.883 kb on - strand at 14.883 kb on - strand at 14.890 kb on - strand at 15.152 kb on + strand, within GFF7367 at 15.152 kb on + strand, within GFF7367 at 15.152 kb on + strand, within GFF7367 at 15.152 kb on + strand, within GFF7367 at 15.153 kb on - strand, within GFF7367 at 15.153 kb on - strand, within GFF7367 at 15.153 kb on - strand, within GFF7367 at 15.153 kb on - strand, within GFF7367 at 15.364 kb on + strand, within GFF7368 at 15.533 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 12,169 + GFF7364 0.69 +0.1 12,264 + GFF7364 0.78 -1.8 12,265 - GFF7364 0.78 -0.1 12,367 + GFF7364 0.87 -0.1 12,368 - GFF7364 0.87 -0.7 12,599 + GFF7365 0.13 -0.7 12,599 + GFF7365 0.13 -0.4 12,600 - GFF7365 0.13 +0.6 12,600 - GFF7365 0.13 -0.2 12,772 - GFF7365 0.49 -0.3 12,879 + GFF7365 0.71 -0.6 12,879 + GFF7365 0.71 -0.4 12,879 + GFF7365 0.71 -0.6 12,880 - GFF7365 0.71 -0.0 13,363 + GFF7366 0.22 +0.0 13,388 - GFF7366 0.23 -0.1 13,477 + GFF7366 0.29 +0.6 13,477 + GFF7366 0.29 +0.4 13,477 + GFF7366 0.29 -1.5 13,478 - GFF7366 0.29 -0.6 13,478 - GFF7366 0.29 -0.3 13,481 - GFF7366 0.29 -0.4 13,481 - GFF7366 0.29 -0.5 13,690 + GFF7366 0.43 -0.1 13,690 + GFF7366 0.43 +0.1 13,690 + GFF7366 0.43 +0.4 13,690 + GFF7366 0.43 -0.2 13,691 - GFF7366 0.43 -0.1 13,691 - GFF7366 0.43 +1.0 13,691 - GFF7366 0.43 -0.1 13,692 + GFF7366 0.43 +0.2 13,692 + GFF7366 0.43 +0.9 13,692 + GFF7366 0.43 +0.2 13,692 + GFF7366 0.43 -0.3 13,693 - GFF7366 0.43 -0.4 13,693 - GFF7366 0.43 -0.2 13,769 - GFF7366 0.48 -0.4 13,996 + GFF7366 0.62 +1.0 13,996 + GFF7366 0.62 -0.7 13,997 - GFF7366 0.62 -0.0 14,093 + GFF7366 0.68 +0.7 14,108 - GFF7366 0.69 +0.1 14,182 + GFF7366 0.74 +0.9 14,335 + GFF7366 0.84 +0.7 14,335 + GFF7366 0.84 +0.7 14,524 + -0.3 14,524 + -0.6 14,524 + -0.4 14,524 + -0.2 14,525 - -0.4 14,883 - +0.7 14,883 - -0.2 14,890 - +1.0 15,152 + GFF7367 0.70 -0.3 15,152 + GFF7367 0.70 +1.1 15,152 + GFF7367 0.70 -0.2 15,152 + GFF7367 0.70 -0.7 15,153 - GFF7367 0.71 -1.1 15,153 - GFF7367 0.71 +0.5 15,153 - GFF7367 0.71 -1.9 15,153 - GFF7367 0.71 +0.1 15,364 + GFF7368 0.63 +0.3 15,533 + -0.8
Or see this region's nucleotide sequence