Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7321 and GFF7322 are separated by 98 nucleotides GFF7322 and GFF7323 overlap by 4 nucleotides GFF7323 and GFF7324 are separated by 193 nucleotides GFF7324 and GFF7325 are separated by 5 nucleotides
GFF7321 - Sensor histidine kinase GlrK, at 16,122 to 17,549
GFF7321
GFF7322 - hypothetical protein, at 17,648 to 18,259
GFF7322
GFF7323 - Transcriptional response regulatory protein GlrR, at 18,256 to 19,644
GFF7323
GFF7324 - hypothetical protein, at 19,838 to 20,041
GFF7324
GFF7325 - Glucans biosynthesis glucosyltransferase H, at 20,047 to 22,053
GFF7325
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1
2 at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.463 kb on + strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.464 kb on - strand at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.843 kb on + strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 17.844 kb on - strand, within GFF7322 at 18.074 kb on + strand, within GFF7322 at 18.074 kb on + strand, within GFF7322 at 18.075 kb on - strand, within GFF7322 at 18.264 kb on + strand at 18.562 kb on + strand, within GFF7323 at 18.562 kb on + strand, within GFF7323 at 18.562 kb on + strand, within GFF7323 at 18.563 kb on - strand, within GFF7323 at 18.563 kb on - strand, within GFF7323 at 18.563 kb on - strand, within GFF7323 at 18.563 kb on - strand, within GFF7323 at 18.563 kb on - strand, within GFF7323 at 18.563 kb on - strand, within GFF7323 at 18.577 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.153 kb on + strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.154 kb on - strand, within GFF7323 at 19.157 kb on - strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.251 kb on + strand, within GFF7323 at 19.252 kb on - strand, within GFF7323 at 19.252 kb on - strand, within GFF7323 at 19.252 kb on - strand, within GFF7323 at 19.252 kb on - strand, within GFF7323 at 19.252 kb on - strand, within GFF7323 at 19.252 kb on - strand, within GFF7323 at 19.258 kb on + strand, within GFF7323 at 19.258 kb on + strand, within GFF7323 at 19.258 kb on + strand, within GFF7323 at 19.259 kb on - strand, within GFF7323 at 19.259 kb on - strand, within GFF7323 at 19.259 kb on - strand, within GFF7323 at 19.259 kb on - strand, within GFF7323 at 19.444 kb on + strand, within GFF7323 at 19.444 kb on + strand, within GFF7323 at 19.444 kb on + strand, within GFF7323 at 19.444 kb on + strand, within GFF7323 at 19.444 kb on + strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.445 kb on - strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.477 kb on + strand, within GFF7323 at 19.478 kb on - strand, within GFF7323 at 19.478 kb on - strand, within GFF7323 at 19.478 kb on - strand, within GFF7323 at 19.478 kb on - strand, within GFF7323 at 19.478 kb on - strand, within GFF7323 at 19.478 kb on - strand, within GFF7323 at 19.558 kb on + strand at 19.558 kb on + strand at 19.559 kb on - strand at 19.654 kb on + strand at 19.654 kb on + strand at 19.655 kb on - strand at 19.655 kb on - strand at 19.655 kb on - strand at 19.655 kb on - strand at 19.655 kb on - strand at 19.655 kb on - strand at 19.670 kb on - strand at 19.757 kb on + strand at 19.758 kb on - strand at 19.831 kb on + strand at 19.831 kb on + strand at 19.832 kb on - strand at 19.832 kb on - strand at 19.832 kb on - strand at 19.934 kb on + strand, within GFF7324 at 19.934 kb on + strand, within GFF7324 at 19.934 kb on + strand, within GFF7324 at 19.935 kb on - strand, within GFF7324 at 19.935 kb on - strand, within GFF7324 at 19.935 kb on - strand, within GFF7324 at 20.039 kb on + strand at 20.039 kb on + strand at 20.039 kb on + strand at 20.039 kb on + strand at 20.040 kb on - strand at 20.040 kb on - strand at 20.040 kb on - strand at 20.040 kb on - strand at 20.383 kb on + strand, within GFF7325 at 20.383 kb on + strand, within GFF7325 at 20.383 kb on + strand, within GFF7325 at 20.383 kb on + strand, within GFF7325 at 20.384 kb on - strand, within GFF7325 at 20.384 kb on - strand, within GFF7325 at 20.422 kb on + strand, within GFF7325 at 20.422 kb on + strand, within GFF7325 at 20.422 kb on + strand, within GFF7325 at 20.422 kb on + strand, within GFF7325 at 20.423 kb on - strand, within GFF7325 at 20.423 kb on - strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.479 kb on + strand, within GFF7325 at 20.480 kb on - strand, within GFF7325 at 20.480 kb on - strand, within GFF7325 at 20.480 kb on - strand, within GFF7325 at 20.480 kb on - strand, within GFF7325
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 17,463 + -0.1 17,463 + -0.7 17,463 + -1.2 17,463 + +0.9 17,463 + -0.6 17,463 + -0.4 17,463 + -0.2 17,463 + +0.3 17,463 + -0.7 17,463 + -0.5 17,463 + -0.6 17,463 + -1.2 17,463 + -0.1 17,464 - -2.1 17,464 - -0.3 17,464 - +0.4 17,464 - -0.7 17,464 - +0.2 17,464 - -1.3 17,464 - -0.6 17,464 - -0.2 17,464 - -0.9 17,464 - +0.8 17,464 - -1.1 17,464 - -0.8 17,843 + GFF7322 0.32 -0.9 17,843 + GFF7322 0.32 +0.1 17,843 + GFF7322 0.32 -0.1 17,843 + GFF7322 0.32 -1.7 17,843 + GFF7322 0.32 -0.2 17,844 - GFF7322 0.32 +0.8 17,844 - GFF7322 0.32 +0.5 17,844 - GFF7322 0.32 -1.2 17,844 - GFF7322 0.32 -0.7 18,074 + GFF7322 0.70 -1.4 18,074 + GFF7322 0.70 +0.0 18,075 - GFF7322 0.70 -0.5 18,264 + -0.5 18,562 + GFF7323 0.22 -0.4 18,562 + GFF7323 0.22 +0.8 18,562 + GFF7323 0.22 -0.4 18,563 - GFF7323 0.22 -0.2 18,563 - GFF7323 0.22 +0.2 18,563 - GFF7323 0.22 -0.9 18,563 - GFF7323 0.22 -0.2 18,563 - GFF7323 0.22 +0.3 18,563 - GFF7323 0.22 +0.4 18,577 + GFF7323 0.23 -0.3 19,153 + GFF7323 0.65 -0.9 19,153 + GFF7323 0.65 -1.6 19,153 + GFF7323 0.65 -2.1 19,153 + GFF7323 0.65 -0.1 19,153 + GFF7323 0.65 +1.8 19,153 + GFF7323 0.65 +0.5 19,153 + GFF7323 0.65 -0.3 19,153 + GFF7323 0.65 -0.9 19,153 + GFF7323 0.65 +0.6 19,153 + GFF7323 0.65 +1.0 19,153 + GFF7323 0.65 +0.8 19,153 + GFF7323 0.65 +0.3 19,153 + GFF7323 0.65 +2.3 19,154 - GFF7323 0.65 -0.7 19,154 - GFF7323 0.65 -1.5 19,154 - GFF7323 0.65 -0.3 19,154 - GFF7323 0.65 +0.3 19,154 - GFF7323 0.65 -1.4 19,154 - GFF7323 0.65 -1.6 19,154 - GFF7323 0.65 -0.8 19,154 - GFF7323 0.65 -0.5 19,154 - GFF7323 0.65 -1.5 19,154 - GFF7323 0.65 +0.3 19,154 - GFF7323 0.65 +0.2 19,154 - GFF7323 0.65 -1.1 19,154 - GFF7323 0.65 -1.2 19,154 - GFF7323 0.65 -1.1 19,154 - GFF7323 0.65 -0.7 19,154 - GFF7323 0.65 -1.2 19,154 - GFF7323 0.65 -1.0 19,154 - GFF7323 0.65 -2.3 19,154 - GFF7323 0.65 -0.4 19,154 - GFF7323 0.65 -0.7 19,157 - GFF7323 0.65 +0.1 19,251 + GFF7323 0.72 -0.7 19,251 + GFF7323 0.72 -0.2 19,251 + GFF7323 0.72 +0.2 19,251 + GFF7323 0.72 -0.6 19,251 + GFF7323 0.72 +0.0 19,251 + GFF7323 0.72 -0.6 19,251 + GFF7323 0.72 -1.0 19,252 - GFF7323 0.72 +0.3 19,252 - GFF7323 0.72 -0.4 19,252 - GFF7323 0.72 +0.3 19,252 - GFF7323 0.72 -1.1 19,252 - GFF7323 0.72 -1.1 19,252 - GFF7323 0.72 -0.6 19,258 + GFF7323 0.72 -0.5 19,258 + GFF7323 0.72 -0.9 19,258 + GFF7323 0.72 -1.2 19,259 - GFF7323 0.72 -0.5 19,259 - GFF7323 0.72 +0.9 19,259 - GFF7323 0.72 +0.2 19,259 - GFF7323 0.72 -0.4 19,444 + GFF7323 0.86 -0.6 19,444 + GFF7323 0.86 -0.0 19,444 + GFF7323 0.86 -0.8 19,444 + GFF7323 0.86 -2.2 19,444 + GFF7323 0.86 +0.6 19,445 - GFF7323 0.86 -0.8 19,445 - GFF7323 0.86 -0.5 19,445 - GFF7323 0.86 -0.9 19,445 - GFF7323 0.86 +1.1 19,445 - GFF7323 0.86 -1.6 19,445 - GFF7323 0.86 +0.1 19,445 - GFF7323 0.86 +0.4 19,445 - GFF7323 0.86 -1.2 19,477 + GFF7323 0.88 -0.3 19,477 + GFF7323 0.88 +0.3 19,477 + GFF7323 0.88 -1.2 19,477 + GFF7323 0.88 -0.1 19,477 + GFF7323 0.88 -0.2 19,477 + GFF7323 0.88 -1.2 19,477 + GFF7323 0.88 -0.4 19,478 - GFF7323 0.88 -0.0 19,478 - GFF7323 0.88 +1.5 19,478 - GFF7323 0.88 -0.2 19,478 - GFF7323 0.88 -0.1 19,478 - GFF7323 0.88 -0.6 19,478 - GFF7323 0.88 -0.4 19,558 + -0.1 19,558 + -0.3 19,559 - -0.6 19,654 + -0.6 19,654 + -0.9 19,655 - -0.8 19,655 - -0.4 19,655 - +0.3 19,655 - -0.2 19,655 - -2.2 19,655 - -0.0 19,670 - -0.3 19,757 + -0.5 19,758 - -0.2 19,831 + -1.7 19,831 + -0.6 19,832 - +0.3 19,832 - +0.0 19,832 - -0.7 19,934 + GFF7324 0.47 -0.4 19,934 + GFF7324 0.47 +0.5 19,934 + GFF7324 0.47 -0.9 19,935 - GFF7324 0.48 -0.2 19,935 - GFF7324 0.48 +0.9 19,935 - GFF7324 0.48 -0.1 20,039 + -0.0 20,039 + -1.8 20,039 + -1.6 20,039 + -0.4 20,040 - +0.2 20,040 - -0.4 20,040 - -0.1 20,040 - -0.9 20,383 + GFF7325 0.17 -0.5 20,383 + GFF7325 0.17 -0.4 20,383 + GFF7325 0.17 -0.6 20,383 + GFF7325 0.17 -0.6 20,384 - GFF7325 0.17 -1.9 20,384 - GFF7325 0.17 +0.9 20,422 + GFF7325 0.19 -1.4 20,422 + GFF7325 0.19 -0.4 20,422 + GFF7325 0.19 -1.1 20,422 + GFF7325 0.19 +1.2 20,423 - GFF7325 0.19 -0.4 20,423 - GFF7325 0.19 +0.4 20,479 + GFF7325 0.22 +0.4 20,479 + GFF7325 0.22 -1.5 20,479 + GFF7325 0.22 +0.3 20,479 + GFF7325 0.22 +0.4 20,479 + GFF7325 0.22 +0.6 20,479 + GFF7325 0.22 -1.7 20,479 + GFF7325 0.22 -0.6 20,479 + GFF7325 0.22 -0.2 20,479 + GFF7325 0.22 +1.2 20,480 - GFF7325 0.22 -1.1 20,480 - GFF7325 0.22 +0.1 20,480 - GFF7325 0.22 -1.4 20,480 - GFF7325 0.22 -0.6
Or see this region's nucleotide sequence