Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7135 and GFF7136 are separated by 363 nucleotides GFF7136 and GFF7137 are separated by 58 nucleotides GFF7137 and GFF7138 are separated by 84 nucleotides
GFF7135 - FIG00977464: hypothetical protein, at 3,481 to 4,722
GFF7135
GFF7136 - hypothetical protein, at 5,086 to 5,334
GFF7136
GFF7137 - Translation initiation factor 1, at 5,393 to 5,665
GFF7137
GFF7138 - ATP-dependent 23S rRNA helicase DbpA, at 5,750 to 7,180
GFF7138
Position (kb) 5
6 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.186 kb on + strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.187 kb on - strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.192 kb on + strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.193 kb on - strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.549 kb on + strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.550 kb on - strand, within GFF7135 at 4.689 kb on - strand at 4.782 kb on - strand at 4.782 kb on - strand at 4.812 kb on - strand at 4.812 kb on - strand at 4.813 kb on + strand at 4.813 kb on + strand at 4.813 kb on + strand at 4.857 kb on + strand at 4.857 kb on + strand at 4.989 kb on + strand at 4.989 kb on + strand at 4.989 kb on + strand at 4.989 kb on + strand at 4.990 kb on - strand at 4.990 kb on - strand at 5.036 kb on + strand at 5.036 kb on + strand at 5.037 kb on - strand at 5.037 kb on - strand at 5.037 kb on - strand at 5.037 kb on - strand at 5.061 kb on + strand at 5.061 kb on + strand at 5.061 kb on + strand at 5.106 kb on + strand at 5.106 kb on + strand at 5.106 kb on + strand at 5.106 kb on + strand at 5.106 kb on + strand at 5.106 kb on + strand at 5.107 kb on - strand at 5.107 kb on - strand at 5.107 kb on - strand at 5.107 kb on - strand at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.122 kb on + strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.123 kb on - strand, within GFF7136 at 5.127 kb on - strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.266 kb on + strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.267 kb on - strand, within GFF7136 at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.341 kb on + strand at 5.342 kb on - strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.384 kb on + strand at 5.852 kb on + strand at 5.852 kb on + strand at 5.853 kb on - strand at 5.853 kb on - strand at 5.853 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 4,186 + GFF7135 0.57 +0.6 4,186 + GFF7135 0.57 +0.0 4,186 + GFF7135 0.57 +0.3 4,186 + GFF7135 0.57 -0.4 4,186 + GFF7135 0.57 +0.2 4,186 + GFF7135 0.57 +1.3 4,186 + GFF7135 0.57 +0.5 4,186 + GFF7135 0.57 +0.1 4,186 + GFF7135 0.57 -0.7 4,186 + GFF7135 0.57 +0.1 4,186 + GFF7135 0.57 -1.5 4,186 + GFF7135 0.57 -0.2 4,186 + GFF7135 0.57 -0.8 4,186 + GFF7135 0.57 +0.0 4,186 + GFF7135 0.57 -0.3 4,186 + GFF7135 0.57 +0.5 4,187 - GFF7135 0.57 +0.9 4,187 - GFF7135 0.57 +0.7 4,187 - GFF7135 0.57 -0.7 4,187 - GFF7135 0.57 +1.4 4,187 - GFF7135 0.57 -0.1 4,187 - GFF7135 0.57 -0.5 4,187 - GFF7135 0.57 +0.3 4,187 - GFF7135 0.57 -0.3 4,187 - GFF7135 0.57 +1.2 4,187 - GFF7135 0.57 -0.6 4,187 - GFF7135 0.57 +0.9 4,187 - GFF7135 0.57 -0.3 4,187 - GFF7135 0.57 -0.4 4,187 - GFF7135 0.57 -0.7 4,187 - GFF7135 0.57 +0.0 4,187 - GFF7135 0.57 -0.4 4,192 + GFF7135 0.57 -0.7 4,192 + GFF7135 0.57 -1.2 4,192 + GFF7135 0.57 -1.1 4,192 + GFF7135 0.57 +0.5 4,192 + GFF7135 0.57 +0.1 4,192 + GFF7135 0.57 +1.0 4,192 + GFF7135 0.57 -0.2 4,192 + GFF7135 0.57 -0.4 4,192 + GFF7135 0.57 +0.4 4,192 + GFF7135 0.57 +0.9 4,192 + GFF7135 0.57 +0.7 4,192 + GFF7135 0.57 -0.8 4,192 + GFF7135 0.57 -0.1 4,192 + GFF7135 0.57 +0.3 4,192 + GFF7135 0.57 -0.1 4,192 + GFF7135 0.57 +0.2 4,192 + GFF7135 0.57 +0.4 4,192 + GFF7135 0.57 -1.0 4,193 - GFF7135 0.57 +1.9 4,193 - GFF7135 0.57 -0.6 4,193 - GFF7135 0.57 -1.3 4,193 - GFF7135 0.57 +0.7 4,193 - GFF7135 0.57 -0.1 4,193 - GFF7135 0.57 -0.0 4,193 - GFF7135 0.57 -0.0 4,193 - GFF7135 0.57 +0.1 4,193 - GFF7135 0.57 -0.3 4,193 - GFF7135 0.57 -0.7 4,193 - GFF7135 0.57 +0.1 4,193 - GFF7135 0.57 +0.3 4,193 - GFF7135 0.57 +0.0 4,193 - GFF7135 0.57 +0.9 4,193 - GFF7135 0.57 +1.4 4,193 - GFF7135 0.57 -1.0 4,193 - GFF7135 0.57 -0.7 4,193 - GFF7135 0.57 -0.1 4,549 + GFF7135 0.86 -0.7 4,549 + GFF7135 0.86 +0.0 4,549 + GFF7135 0.86 -1.4 4,549 + GFF7135 0.86 +0.2 4,549 + GFF7135 0.86 -1.0 4,549 + GFF7135 0.86 -0.8 4,549 + GFF7135 0.86 +0.4 4,549 + GFF7135 0.86 +0.6 4,549 + GFF7135 0.86 -0.7 4,549 + GFF7135 0.86 -0.3 4,549 + GFF7135 0.86 -0.4 4,549 + GFF7135 0.86 -0.9 4,549 + GFF7135 0.86 +0.2 4,549 + GFF7135 0.86 +0.9 4,550 - GFF7135 0.86 -0.4 4,550 - GFF7135 0.86 +0.1 4,550 - GFF7135 0.86 +0.6 4,550 - GFF7135 0.86 +0.3 4,550 - GFF7135 0.86 -0.1 4,550 - GFF7135 0.86 -0.2 4,550 - GFF7135 0.86 -0.3 4,550 - GFF7135 0.86 +0.3 4,550 - GFF7135 0.86 -0.1 4,550 - GFF7135 0.86 +0.0 4,689 - +0.2 4,782 - -0.2 4,782 - -0.3 4,812 - -0.6 4,812 - +0.0 4,813 + -0.0 4,813 + -0.3 4,813 + +0.5 4,857 + -0.3 4,857 + +0.7 4,989 + -0.5 4,989 + -0.3 4,989 + -0.6 4,989 + -0.2 4,990 - +0.1 4,990 - -0.0 5,036 + +0.8 5,036 + -0.4 5,037 - +0.5 5,037 - +0.3 5,037 - +0.6 5,037 - -0.2 5,061 + +0.4 5,061 + -1.1 5,061 + -1.1 5,106 + -0.8 5,106 + +0.3 5,106 + -0.6 5,106 + -1.0 5,106 + +0.9 5,106 + +0.9 5,107 - -0.0 5,107 - -0.5 5,107 - -1.0 5,107 - +0.3 5,122 + GFF7136 0.14 -1.1 5,122 + GFF7136 0.14 -0.6 5,122 + GFF7136 0.14 -0.0 5,122 + GFF7136 0.14 +0.3 5,122 + GFF7136 0.14 -0.5 5,122 + GFF7136 0.14 -0.7 5,122 + GFF7136 0.14 +0.3 5,122 + GFF7136 0.14 +1.4 5,122 + GFF7136 0.14 -0.4 5,122 + GFF7136 0.14 -0.2 5,122 + GFF7136 0.14 +0.9 5,122 + GFF7136 0.14 -0.6 5,122 + GFF7136 0.14 -0.7 5,122 + GFF7136 0.14 +0.3 5,122 + GFF7136 0.14 -0.6 5,122 + GFF7136 0.14 -0.5 5,122 + GFF7136 0.14 +0.4 5,122 + GFF7136 0.14 -0.9 5,122 + GFF7136 0.14 -0.5 5,122 + GFF7136 0.14 +0.2 5,122 + GFF7136 0.14 -0.7 5,122 + GFF7136 0.14 -0.1 5,122 + GFF7136 0.14 +0.9 5,123 - GFF7136 0.15 -1.1 5,123 - GFF7136 0.15 -0.9 5,123 - GFF7136 0.15 -0.6 5,123 - GFF7136 0.15 +0.4 5,123 - GFF7136 0.15 -0.0 5,123 - GFF7136 0.15 -1.1 5,123 - GFF7136 0.15 -0.1 5,123 - GFF7136 0.15 -0.8 5,123 - GFF7136 0.15 +0.1 5,123 - GFF7136 0.15 -0.1 5,123 - GFF7136 0.15 +0.1 5,123 - GFF7136 0.15 +1.3 5,123 - GFF7136 0.15 -1.8 5,123 - GFF7136 0.15 +0.1 5,123 - GFF7136 0.15 -0.4 5,123 - GFF7136 0.15 -0.8 5,123 - GFF7136 0.15 -1.1 5,127 - GFF7136 0.16 +0.0 5,266 + GFF7136 0.72 -0.8 5,266 + GFF7136 0.72 +0.0 5,266 + GFF7136 0.72 +0.5 5,266 + GFF7136 0.72 -0.5 5,266 + GFF7136 0.72 +0.6 5,266 + GFF7136 0.72 +0.1 5,266 + GFF7136 0.72 -0.7 5,266 + GFF7136 0.72 +2.4 5,266 + GFF7136 0.72 -2.1 5,266 + GFF7136 0.72 -0.1 5,266 + GFF7136 0.72 -0.4 5,266 + GFF7136 0.72 +0.2 5,266 + GFF7136 0.72 +0.5 5,267 - GFF7136 0.73 +1.3 5,267 - GFF7136 0.73 -0.3 5,267 - GFF7136 0.73 -1.1 5,267 - GFF7136 0.73 -0.4 5,267 - GFF7136 0.73 -0.7 5,267 - GFF7136 0.73 -0.0 5,267 - GFF7136 0.73 -0.4 5,267 - GFF7136 0.73 +0.4 5,341 + -0.7 5,341 + -1.2 5,341 + -0.0 5,341 + +1.9 5,341 + -0.1 5,341 + -0.9 5,341 + +1.3 5,341 + +0.1 5,341 + +0.9 5,341 + +0.9 5,341 + -0.7 5,341 + -0.3 5,341 + -0.7 5,341 + -1.8 5,342 - +0.3 5,384 + -1.1 5,384 + -0.5 5,384 + -0.8 5,384 + -0.8 5,384 + -0.5 5,384 + -0.5 5,384 + +0.0 5,384 + -1.1 5,384 + +0.5 5,852 + -1.1 5,852 + -0.3 5,853 - -0.3 5,853 - +0.3 5,853 - -0.6
Or see this region's nucleotide sequence