Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7046 and GFF7047 are separated by 102 nucleotides GFF7047 and GFF7048 are separated by 2 nucleotides GFF7048 and GFF7049 are separated by 27 nucleotides
GFF7046 - FIG00854755: hypothetical protein, at 7,210 to 8,406
GFF7046
GFF7047 - hypothetical protein, at 8,509 to 8,781
GFF7047
GFF7048 - hypothetical protein, at 8,784 to 9,611
GFF7048
GFF7049 - hypothetical protein, at 9,639 to 10,094
GFF7049
Position (kb) 8
9 Strain fitness (log2 ratio) -1
0
1
2 at 7.700 kb on + strand, within GFF7046 at 7.700 kb on + strand, within GFF7046 at 7.700 kb on + strand, within GFF7046 at 7.700 kb on + strand, within GFF7046 at 7.700 kb on + strand, within GFF7046 at 7.700 kb on + strand, within GFF7046 at 7.701 kb on - strand, within GFF7046 at 7.701 kb on - strand, within GFF7046 at 7.701 kb on - strand, within GFF7046 at 7.701 kb on - strand, within GFF7046 at 7.701 kb on - strand, within GFF7046 at 7.736 kb on + strand, within GFF7046 at 7.736 kb on + strand, within GFF7046 at 7.736 kb on + strand, within GFF7046 at 7.736 kb on + strand, within GFF7046 at 7.737 kb on - strand, within GFF7046 at 8.441 kb on + strand at 8.656 kb on + strand, within GFF7047 at 8.656 kb on + strand, within GFF7047 at 8.656 kb on + strand, within GFF7047 at 8.657 kb on - strand, within GFF7047 at 8.743 kb on + strand, within GFF7047 at 8.756 kb on - strand at 8.779 kb on + strand at 8.779 kb on + strand at 8.779 kb on + strand at 8.779 kb on + strand at 8.780 kb on - strand at 9.213 kb on + strand, within GFF7048 at 9.214 kb on - strand, within GFF7048 at 9.404 kb on + strand, within GFF7048 at 9.404 kb on + strand, within GFF7048 at 9.404 kb on + strand, within GFF7048 at 9.405 kb on - strand, within GFF7048 at 9.405 kb on - strand, within GFF7048 at 9.405 kb on - strand, within GFF7048 at 9.440 kb on + strand, within GFF7048 at 9.609 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 7,700 + GFF7046 0.41 -0.0 7,700 + GFF7046 0.41 +0.4 7,700 + GFF7046 0.41 -0.2 7,700 + GFF7046 0.41 -0.3 7,700 + GFF7046 0.41 -0.8 7,700 + GFF7046 0.41 +2.0 7,701 - GFF7046 0.41 +0.8 7,701 - GFF7046 0.41 -0.6 7,701 - GFF7046 0.41 -0.8 7,701 - GFF7046 0.41 +0.9 7,701 - GFF7046 0.41 +1.4 7,736 + GFF7046 0.44 -0.2 7,736 + GFF7046 0.44 -0.5 7,736 + GFF7046 0.44 -1.7 7,736 + GFF7046 0.44 +0.4 7,737 - GFF7046 0.44 +1.2 8,441 + +0.0 8,656 + GFF7047 0.54 +0.2 8,656 + GFF7047 0.54 -0.2 8,656 + GFF7047 0.54 -0.2 8,657 - GFF7047 0.54 +0.3 8,743 + GFF7047 0.86 +0.7 8,756 - +1.0 8,779 + -1.4 8,779 + +0.1 8,779 + -0.2 8,779 + -0.4 8,780 - +0.3 9,213 + GFF7048 0.52 -0.2 9,214 - GFF7048 0.52 -0.2 9,404 + GFF7048 0.75 -0.7 9,404 + GFF7048 0.75 -1.4 9,404 + GFF7048 0.75 +0.2 9,405 - GFF7048 0.75 +0.1 9,405 - GFF7048 0.75 +0.1 9,405 - GFF7048 0.75 +0.4 9,440 + GFF7048 0.79 -0.4 9,609 + -0.1
Or see this region's nucleotide sequence