Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4246 and GFF4247 are separated by 41 nucleotides GFF4247 and GFF4248 are separated by 4 nucleotides GFF4248 and GFF4249 are separated by 102 nucleotides
GFF4246 - FIG00464377: hypothetical protein, at 161,725 to 162,369
GFF4246
GFF4247 - no description, at 162,411 to 163,082
GFF4247
GFF4248 - Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2), at 163,087 to 163,992
GFF4248
GFF4249 - hypothetical protein, at 164,095 to 165,507
GFF4249
Position (kb) 163
164 Strain fitness (log2 ratio) -2
-1
0
1
2 at 162.212 kb on - strand, within GFF4246 at 162.798 kb on + strand, within GFF4247 at 162.798 kb on + strand, within GFF4247 at 162.798 kb on + strand, within GFF4247 at 162.799 kb on - strand, within GFF4247 at 162.918 kb on + strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.919 kb on - strand, within GFF4247 at 162.924 kb on + strand, within GFF4247 at 162.925 kb on - strand, within GFF4247 at 162.925 kb on - strand, within GFF4247 at 162.925 kb on - strand, within GFF4247 at 163.100 kb on + strand at 163.101 kb on - strand at 163.231 kb on + strand, within GFF4248 at 163.231 kb on + strand, within GFF4248 at 163.231 kb on + strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.232 kb on - strand, within GFF4248 at 163.636 kb on + strand, within GFF4248 at 163.636 kb on + strand, within GFF4248 at 163.636 kb on + strand, within GFF4248 at 163.636 kb on + strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.637 kb on - strand, within GFF4248 at 163.639 kb on + strand, within GFF4248 at 163.675 kb on + strand, within GFF4248 at 163.676 kb on - strand, within GFF4248 at 163.676 kb on - strand, within GFF4248 at 163.676 kb on - strand, within GFF4248 at 163.750 kb on + strand, within GFF4248 at 163.750 kb on + strand, within GFF4248 at 163.834 kb on + strand, within GFF4248 at 163.834 kb on + strand, within GFF4248 at 163.835 kb on - strand, within GFF4248 at 163.835 kb on - strand, within GFF4248 at 163.835 kb on - strand, within GFF4248 at 164.022 kb on + strand at 164.022 kb on + strand at 164.061 kb on - strand at 164.061 kb on - strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.092 kb on + strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.093 kb on - strand at 164.112 kb on + strand at 164.112 kb on + strand at 164.113 kb on - strand at 164.113 kb on - strand at 164.113 kb on - strand at 164.113 kb on - strand at 164.113 kb on - strand at 164.393 kb on - strand, within GFF4249 at 164.417 kb on + strand, within GFF4249 at 164.489 kb on + strand, within GFF4249 at 164.489 kb on + strand, within GFF4249 at 164.489 kb on + strand, within GFF4249 at 164.490 kb on - strand, within GFF4249 at 164.490 kb on - strand, within GFF4249 at 164.490 kb on - strand, within GFF4249 at 164.560 kb on + strand, within GFF4249 at 164.560 kb on + strand, within GFF4249 at 164.561 kb on - strand, within GFF4249 at 164.561 kb on - strand, within GFF4249 at 164.668 kb on + strand, within GFF4249 at 164.668 kb on + strand, within GFF4249 at 164.668 kb on + strand, within GFF4249 at 164.668 kb on + strand, within GFF4249 at 164.669 kb on - strand, within GFF4249 at 164.669 kb on - strand, within GFF4249 at 164.669 kb on - strand, within GFF4249 at 164.813 kb on - strand, within GFF4249 at 164.851 kb on + strand, within GFF4249 at 164.851 kb on + strand, within GFF4249 at 164.851 kb on + strand, within GFF4249 at 164.851 kb on + strand, within GFF4249 at 164.852 kb on - strand, within GFF4249 at 164.852 kb on - strand, within GFF4249 at 164.852 kb on - strand, within GFF4249 at 164.852 kb on - strand, within GFF4249 at 164.954 kb on - strand, within GFF4249 at 164.976 kb on + strand, within GFF4249
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 162,212 - GFF4246 0.76 -1.0 162,798 + GFF4247 0.58 -0.3 162,798 + GFF4247 0.58 -0.1 162,798 + GFF4247 0.58 -0.5 162,799 - GFF4247 0.58 -0.3 162,918 + GFF4247 0.75 -0.4 162,919 - GFF4247 0.76 -1.6 162,919 - GFF4247 0.76 -0.6 162,919 - GFF4247 0.76 -0.1 162,919 - GFF4247 0.76 +0.4 162,919 - GFF4247 0.76 -0.3 162,924 + GFF4247 0.76 +0.4 162,925 - GFF4247 0.76 -0.0 162,925 - GFF4247 0.76 +0.3 162,925 - GFF4247 0.76 +0.1 163,100 + +0.3 163,101 - -0.2 163,231 + GFF4248 0.16 -0.9 163,231 + GFF4248 0.16 -0.1 163,231 + GFF4248 0.16 -0.5 163,232 - GFF4248 0.16 +0.1 163,232 - GFF4248 0.16 -0.7 163,232 - GFF4248 0.16 -0.9 163,232 - GFF4248 0.16 -0.2 163,232 - GFF4248 0.16 -0.6 163,636 + GFF4248 0.61 -0.2 163,636 + GFF4248 0.61 +0.3 163,636 + GFF4248 0.61 -0.3 163,636 + GFF4248 0.61 -0.5 163,637 - GFF4248 0.61 -0.8 163,637 - GFF4248 0.61 +0.3 163,637 - GFF4248 0.61 +0.6 163,637 - GFF4248 0.61 +1.1 163,637 - GFF4248 0.61 -1.1 163,637 - GFF4248 0.61 -0.2 163,637 - GFF4248 0.61 -0.3 163,637 - GFF4248 0.61 -1.6 163,639 + GFF4248 0.61 +1.7 163,675 + GFF4248 0.65 +0.5 163,676 - GFF4248 0.65 +0.4 163,676 - GFF4248 0.65 -0.2 163,676 - GFF4248 0.65 -1.6 163,750 + GFF4248 0.73 -1.5 163,750 + GFF4248 0.73 +0.7 163,834 + GFF4248 0.82 +0.0 163,834 + GFF4248 0.82 -0.4 163,835 - GFF4248 0.83 -0.3 163,835 - GFF4248 0.83 +1.0 163,835 - GFF4248 0.83 -1.0 164,022 + -0.9 164,022 + -0.1 164,061 - +0.3 164,061 - +0.6 164,092 + -0.9 164,092 + -0.8 164,092 + -1.0 164,092 + -0.1 164,092 + +0.2 164,092 + -0.2 164,092 + -0.7 164,092 + -0.1 164,092 + +0.1 164,092 + -0.0 164,092 + -0.3 164,092 + -0.6 164,092 + -0.7 164,092 + +2.3 164,092 + +0.2 164,093 - -0.3 164,093 - +0.3 164,093 - +0.1 164,093 - +0.6 164,093 - +0.1 164,093 - +0.2 164,093 - +0.4 164,093 - +0.3 164,093 - +0.0 164,093 - -0.6 164,093 - -0.3 164,093 - -0.3 164,093 - +0.2 164,093 - -0.4 164,093 - -0.6 164,112 + -0.1 164,112 + +0.4 164,113 - -0.3 164,113 - -0.3 164,113 - -0.3 164,113 - -0.3 164,113 - -0.2 164,393 - GFF4249 0.21 +0.2 164,417 + GFF4249 0.23 -0.7 164,489 + GFF4249 0.28 -0.7 164,489 + GFF4249 0.28 -0.0 164,489 + GFF4249 0.28 -2.2 164,490 - GFF4249 0.28 +1.4 164,490 - GFF4249 0.28 -0.8 164,490 - GFF4249 0.28 -0.1 164,560 + GFF4249 0.33 -1.0 164,560 + GFF4249 0.33 -0.8 164,561 - GFF4249 0.33 +0.1 164,561 - GFF4249 0.33 -0.1 164,668 + GFF4249 0.41 -0.4 164,668 + GFF4249 0.41 +0.2 164,668 + GFF4249 0.41 -0.9 164,668 + GFF4249 0.41 -1.1 164,669 - GFF4249 0.41 +0.0 164,669 - GFF4249 0.41 -0.3 164,669 - GFF4249 0.41 -0.1 164,813 - GFF4249 0.51 -0.9 164,851 + GFF4249 0.54 -0.2 164,851 + GFF4249 0.54 -0.0 164,851 + GFF4249 0.54 -0.6 164,851 + GFF4249 0.54 -0.9 164,852 - GFF4249 0.54 -0.4 164,852 - GFF4249 0.54 -0.3 164,852 - GFF4249 0.54 -0.4 164,852 - GFF4249 0.54 -0.6 164,954 - GFF4249 0.61 -0.1 164,976 + GFF4249 0.62 -0.2
Or see this region's nucleotide sequence