Experiment: phage_bap4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4699 and GFF4700 overlap by 1 nucleotides GFF4700 and GFF4701 overlap by 4 nucleotides GFF4701 and GFF4702 overlap by 4 nucleotides
GFF4699 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 62,722 to 64,008
GFF4699
GFF4700 - Various polyols ABC transporter, permease protein 1, at 64,008 to 64,892
GFF4700
GFF4701 - Various polyols ABC transporter, permease protein 2, at 64,889 to 65,731
GFF4701
GFF4702 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 65,728 to 66,867
GFF4702
Position (kb) 64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 63.061 kb on + strand, within GFF4699 at 63.061 kb on + strand, within GFF4699 at 63.061 kb on + strand, within GFF4699 at 63.061 kb on + strand, within GFF4699 at 63.061 kb on + strand, within GFF4699 at 63.062 kb on - strand, within GFF4699 at 63.062 kb on - strand, within GFF4699 at 63.062 kb on - strand, within GFF4699 at 63.062 kb on - strand, within GFF4699 at 63.062 kb on - strand, within GFF4699 at 63.065 kb on - strand, within GFF4699 at 63.077 kb on - strand, within GFF4699 at 63.077 kb on - strand, within GFF4699 at 63.077 kb on - strand, within GFF4699 at 63.077 kb on - strand, within GFF4699 at 63.082 kb on + strand, within GFF4699 at 63.083 kb on - strand, within GFF4699 at 63.083 kb on - strand, within GFF4699 at 63.083 kb on - strand, within GFF4699 at 63.083 kb on - strand, within GFF4699 at 63.219 kb on + strand, within GFF4699 at 63.219 kb on + strand, within GFF4699 at 63.219 kb on + strand, within GFF4699 at 63.421 kb on + strand, within GFF4699 at 63.421 kb on + strand, within GFF4699 at 63.421 kb on + strand, within GFF4699 at 63.422 kb on - strand, within GFF4699 at 63.422 kb on - strand, within GFF4699 at 63.422 kb on - strand, within GFF4699 at 63.422 kb on - strand, within GFF4699 at 63.440 kb on - strand, within GFF4699 at 63.440 kb on - strand, within GFF4699 at 63.586 kb on + strand, within GFF4699 at 63.802 kb on + strand, within GFF4699 at 63.973 kb on + strand at 63.973 kb on + strand at 64.007 kb on - strand at 64.007 kb on - strand at 64.007 kb on - strand at 64.099 kb on + strand, within GFF4700 at 64.100 kb on - strand, within GFF4700 at 64.182 kb on + strand, within GFF4700 at 64.182 kb on + strand, within GFF4700 at 64.182 kb on + strand, within GFF4700 at 64.183 kb on - strand, within GFF4700 at 64.183 kb on - strand, within GFF4700 at 64.183 kb on - strand, within GFF4700 at 64.291 kb on + strand, within GFF4700 at 64.292 kb on - strand, within GFF4700 at 64.292 kb on - strand, within GFF4700 at 64.292 kb on - strand, within GFF4700 at 64.292 kb on - strand, within GFF4700 at 64.428 kb on + strand, within GFF4700 at 64.429 kb on - strand, within GFF4700 at 64.429 kb on - strand, within GFF4700 at 64.429 kb on - strand, within GFF4700 at 64.429 kb on - strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.434 kb on + strand, within GFF4700 at 64.435 kb on - strand, within GFF4700 at 64.435 kb on - strand, within GFF4700 at 64.435 kb on - strand, within GFF4700 at 64.435 kb on - strand, within GFF4700 at 64.435 kb on - strand, within GFF4700 at 64.623 kb on + strand, within GFF4700 at 64.623 kb on + strand, within GFF4700 at 64.623 kb on + strand, within GFF4700 at 64.623 kb on + strand, within GFF4700 at 64.623 kb on + strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.624 kb on - strand, within GFF4700 at 64.629 kb on + strand, within GFF4700 at 64.630 kb on - strand, within GFF4700 at 64.630 kb on - strand, within GFF4700 at 64.630 kb on - strand, within GFF4700 at 64.716 kb on + strand, within GFF4700 at 64.716 kb on + strand, within GFF4700 at 64.716 kb on + strand, within GFF4700 at 64.716 kb on + strand, within GFF4700 at 64.717 kb on - strand, within GFF4700 at 64.717 kb on - strand, within GFF4700 at 64.717 kb on - strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.767 kb on + strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.768 kb on - strand, within GFF4700 at 64.803 kb on - strand, within GFF4700 at 64.809 kb on + strand at 64.809 kb on + strand at 64.809 kb on + strand at 64.809 kb on + strand at 64.809 kb on + strand at 64.810 kb on - strand at 64.810 kb on - strand at 64.810 kb on - strand at 64.810 kb on - strand at 64.810 kb on - strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.863 kb on + strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 64.864 kb on - strand at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.069 kb on + strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.070 kb on - strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.075 kb on + strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.076 kb on - strand, within GFF4701 at 65.117 kb on + strand, within GFF4701 at 65.178 kb on - strand, within GFF4701 at 65.303 kb on + strand, within GFF4701 at 65.304 kb on - strand, within GFF4701 at 65.304 kb on - strand, within GFF4701 at 65.304 kb on - strand, within GFF4701 at 65.304 kb on - strand, within GFF4701 at 65.333 kb on + strand, within GFF4701 at 65.333 kb on + strand, within GFF4701 at 65.334 kb on - strand, within GFF4701 at 65.373 kb on + strand, within GFF4701 at 65.374 kb on - strand, within GFF4701 at 65.439 kb on - strand, within GFF4701
Per-strain Table
Position Strand Gene LocusTag Fraction phage_bap4 remove 63,061 + GFF4699 0.26 -0.1 63,061 + GFF4699 0.26 -0.3 63,061 + GFF4699 0.26 +0.0 63,061 + GFF4699 0.26 +0.6 63,061 + GFF4699 0.26 +0.8 63,062 - GFF4699 0.26 +0.4 63,062 - GFF4699 0.26 -0.4 63,062 - GFF4699 0.26 -0.8 63,062 - GFF4699 0.26 -0.6 63,062 - GFF4699 0.26 -0.1 63,065 - GFF4699 0.27 -0.4 63,077 - GFF4699 0.28 -0.4 63,077 - GFF4699 0.28 -0.5 63,077 - GFF4699 0.28 +1.2 63,077 - GFF4699 0.28 -0.3 63,082 + GFF4699 0.28 -0.8 63,083 - GFF4699 0.28 -0.8 63,083 - GFF4699 0.28 +0.8 63,083 - GFF4699 0.28 -0.8 63,083 - GFF4699 0.28 -1.2 63,219 + GFF4699 0.39 -1.4 63,219 + GFF4699 0.39 -0.6 63,219 + GFF4699 0.39 -0.7 63,421 + GFF4699 0.54 +0.6 63,421 + GFF4699 0.54 -1.3 63,421 + GFF4699 0.54 -1.0 63,422 - GFF4699 0.54 +0.7 63,422 - GFF4699 0.54 -0.2 63,422 - GFF4699 0.54 +0.8 63,422 - GFF4699 0.54 -0.1 63,440 - GFF4699 0.56 +0.7 63,440 - GFF4699 0.56 -0.6 63,586 + GFF4699 0.67 +0.3 63,802 + GFF4699 0.84 +1.6 63,973 + +0.4 63,973 + -0.1 64,007 - +0.1 64,007 - -1.0 64,007 - +1.2 64,099 + GFF4700 0.10 -0.7 64,100 - GFF4700 0.10 -0.6 64,182 + GFF4700 0.20 -0.4 64,182 + GFF4700 0.20 -0.8 64,182 + GFF4700 0.20 -0.3 64,183 - GFF4700 0.20 -1.2 64,183 - GFF4700 0.20 +1.1 64,183 - GFF4700 0.20 -0.1 64,291 + GFF4700 0.32 +0.0 64,292 - GFF4700 0.32 -0.0 64,292 - GFF4700 0.32 -0.5 64,292 - GFF4700 0.32 +0.7 64,292 - GFF4700 0.32 +1.6 64,428 + GFF4700 0.47 -0.6 64,429 - GFF4700 0.48 +0.6 64,429 - GFF4700 0.48 -0.1 64,429 - GFF4700 0.48 -0.0 64,429 - GFF4700 0.48 -0.3 64,434 + GFF4700 0.48 +0.1 64,434 + GFF4700 0.48 +2.0 64,434 + GFF4700 0.48 -0.0 64,434 + GFF4700 0.48 -0.0 64,434 + GFF4700 0.48 -0.4 64,434 + GFF4700 0.48 +0.2 64,434 + GFF4700 0.48 -0.0 64,434 + GFF4700 0.48 +0.1 64,434 + GFF4700 0.48 +0.9 64,434 + GFF4700 0.48 -1.0 64,435 - GFF4700 0.48 +0.3 64,435 - GFF4700 0.48 -0.0 64,435 - GFF4700 0.48 -1.4 64,435 - GFF4700 0.48 +0.8 64,435 - GFF4700 0.48 -0.8 64,623 + GFF4700 0.69 -0.3 64,623 + GFF4700 0.69 -0.5 64,623 + GFF4700 0.69 +0.1 64,623 + GFF4700 0.69 -1.8 64,623 + GFF4700 0.69 +1.6 64,624 - GFF4700 0.70 -0.7 64,624 - GFF4700 0.70 -0.2 64,624 - GFF4700 0.70 -0.2 64,624 - GFF4700 0.70 +0.0 64,624 - GFF4700 0.70 +0.1 64,624 - GFF4700 0.70 +0.0 64,624 - GFF4700 0.70 -1.4 64,624 - GFF4700 0.70 -1.7 64,629 + GFF4700 0.70 -0.1 64,630 - GFF4700 0.70 +1.0 64,630 - GFF4700 0.70 +0.2 64,630 - GFF4700 0.70 -1.1 64,716 + GFF4700 0.80 +1.1 64,716 + GFF4700 0.80 -0.2 64,716 + GFF4700 0.80 -1.4 64,716 + GFF4700 0.80 -0.4 64,717 - GFF4700 0.80 -0.6 64,717 - GFF4700 0.80 -1.0 64,717 - GFF4700 0.80 +0.0 64,767 + GFF4700 0.86 -0.6 64,767 + GFF4700 0.86 +0.6 64,767 + GFF4700 0.86 -0.4 64,767 + GFF4700 0.86 +0.6 64,767 + GFF4700 0.86 -0.8 64,767 + GFF4700 0.86 -0.4 64,767 + GFF4700 0.86 -0.4 64,767 + GFF4700 0.86 -0.8 64,767 + GFF4700 0.86 -0.5 64,767 + GFF4700 0.86 +0.1 64,767 + GFF4700 0.86 -1.3 64,767 + GFF4700 0.86 -2.6 64,767 + GFF4700 0.86 -0.8 64,768 - GFF4700 0.86 -0.5 64,768 - GFF4700 0.86 +0.7 64,768 - GFF4700 0.86 -0.6 64,768 - GFF4700 0.86 -0.9 64,768 - GFF4700 0.86 -1.1 64,768 - GFF4700 0.86 +0.5 64,768 - GFF4700 0.86 -0.3 64,768 - GFF4700 0.86 +1.1 64,768 - GFF4700 0.86 -0.3 64,768 - GFF4700 0.86 +0.6 64,768 - GFF4700 0.86 -0.4 64,803 - GFF4700 0.90 -0.8 64,809 + -0.8 64,809 + -0.0 64,809 + -0.4 64,809 + -2.1 64,809 + +0.2 64,810 - -0.2 64,810 - -0.6 64,810 - +0.8 64,810 - -0.3 64,810 - -0.2 64,863 + -0.8 64,863 + +0.3 64,863 + -0.4 64,863 + +0.5 64,863 + -1.1 64,863 + -0.4 64,863 + -1.3 64,863 + -0.2 64,863 + -0.3 64,864 - +0.1 64,864 - +0.8 64,864 - -0.4 64,864 - -0.4 64,864 - -1.1 64,864 - -1.6 64,864 - -1.0 64,864 - +0.3 64,864 - +0.2 64,864 - +0.9 65,069 + GFF4701 0.21 -0.4 65,069 + GFF4701 0.21 +0.7 65,069 + GFF4701 0.21 -0.3 65,069 + GFF4701 0.21 -0.1 65,069 + GFF4701 0.21 -1.4 65,069 + GFF4701 0.21 -0.4 65,069 + GFF4701 0.21 -1.0 65,069 + GFF4701 0.21 -1.5 65,069 + GFF4701 0.21 +0.2 65,069 + GFF4701 0.21 -0.4 65,069 + GFF4701 0.21 -0.3 65,070 - GFF4701 0.21 -0.7 65,070 - GFF4701 0.21 +0.3 65,070 - GFF4701 0.21 -0.6 65,070 - GFF4701 0.21 -0.0 65,070 - GFF4701 0.21 +0.6 65,070 - GFF4701 0.21 +0.6 65,070 - GFF4701 0.21 +0.2 65,070 - GFF4701 0.21 +2.1 65,070 - GFF4701 0.21 +0.6 65,075 + GFF4701 0.22 -0.7 65,075 + GFF4701 0.22 +0.6 65,075 + GFF4701 0.22 -0.4 65,075 + GFF4701 0.22 -1.0 65,075 + GFF4701 0.22 -0.0 65,075 + GFF4701 0.22 +0.8 65,075 + GFF4701 0.22 -1.0 65,075 + GFF4701 0.22 -0.0 65,075 + GFF4701 0.22 -0.7 65,075 + GFF4701 0.22 -0.6 65,075 + GFF4701 0.22 +0.1 65,076 - GFF4701 0.22 -0.6 65,076 - GFF4701 0.22 -0.8 65,076 - GFF4701 0.22 -0.4 65,076 - GFF4701 0.22 +0.4 65,076 - GFF4701 0.22 +0.3 65,076 - GFF4701 0.22 -0.1 65,076 - GFF4701 0.22 +2.0 65,076 - GFF4701 0.22 +0.1 65,076 - GFF4701 0.22 +0.7 65,117 + GFF4701 0.27 -0.0 65,178 - GFF4701 0.34 +1.1 65,303 + GFF4701 0.49 -0.4 65,304 - GFF4701 0.49 -0.3 65,304 - GFF4701 0.49 +0.0 65,304 - GFF4701 0.49 -0.1 65,304 - GFF4701 0.49 -1.0 65,333 + GFF4701 0.53 +0.1 65,333 + GFF4701 0.53 +0.7 65,334 - GFF4701 0.53 +0.1 65,373 + GFF4701 0.57 -0.7 65,374 - GFF4701 0.58 -0.5 65,439 - GFF4701 0.65 -0.0
Or see this region's nucleotide sequence